Abstract
We adapt the formalism of currents to compare data surfaces and surfaces of a mechanical model and we use this discrepancy measure to feed a data assimilation procedure. We apply our methodology to perform parameter estimation in a biomechanical model of the heart using synthetic observations of the endo- and epicardium surfaces of an infarcted left ventricle. We compare this formalism with a more classical signed distance operator between surfaces and we numerically show that we have improved the efficiency of our estimation justifying the use of state-of-the-art computational geometry formalism in the data assimilation measurements processing.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Preview
Unable to display preview. Download preview PDF.
References
Chabiniok, R., Moireau, P., Lesault, A., Rahmouni, P.-F., Deux, J.-F., Chapelle, D.: Estimation of tissue contractility from cardiac cine-mri using a biomechanical heart model. In: Biomechanics and Modeling in Mechanobiology (2011)
Delfour, M.C., Zolésio, J.-P.: Shapes and geometries: metrics, analysis, differential calculs, and optimization. In: Advances in Design and Control. Society for Industrial and Applied Mathematics (2011)
Delingette, H., Billet, F., Wong, K.C.L., Sermesant, M., Rhode, K., Ginks, M., Rinaldi, C.A., Razavi, R., Ayache, N.: Personalization of Cardiac Motion and Contractility From Images Using Variational Data Assimilation. IEEE Trans. Biomed. Eng. 59(1), 20–24 (2012)
Durrleman, S., Pennec, X., Trouvé, A., Ayache, A.: Statistical models on sets of curves and surfaces based on currents. Med. Image Anal. 13(5), 793–808 (2009)
Glaunès, J., Qui, J., Miller, M.I., Younes, L.: Large deformation diffeomorphic metric curve mapping. Int. J. Comput. Vision 80(3), 317–336 (2008)
Imperiale, A., Chabiniok, R., Moireau, P., Chapelle, D.: Constitutive parameter estimation methodology using tagged-MRI data. In: Metaxas, D.N., Axel, L. (eds.) FIMH 2011. LNCS, vol. 6666, pp. 409–417. Springer, Heidelberg (2011)
Liu, H., Shi, P.: Maximum a Posteriori Strategy for the Simultaneous Motion and Material Property Estimation of the Heart. IEEE Trans. Biomed. Eng. 56(2), 378–389 (2009)
Marchesseau, S., Delingette, H., Sermesant, M., Ayache, N.: Fast parameter calibration of a cardiac electromechanical model from medical images based on the unscented transform. Biomecch. Model. Mechan. (2012)
Moireau, P., Chapelle, D.: Reduced-order unscented kalman filtering with application to parameter identification in large-dimensional systems. Control, Optimisation and Calculus of Variations 17, 380–405 (2011)
Moireau, P., Chapelle, D., Le Tallec, P.: Filtering for distributed mechanical dystems using position measurements: perspectives in medical imaging. Inverse Problems, 25 (2009)
Peters, J., Ecabert, O., Meyer, C., Schramm, H., Kneser, R., Groth, A., Weese, J.: Automatic whole segmentation in static magnetic resonance image volumes. In: Ayache, N., Ourselin, S., Maeder, A. (eds.) MICCAI 2007, Part II. LNCS, vol. 4792, pp. 402–410. Springer, Heidelberg (2007)
Sainte-Marie, J., Chapelle, D., Cimrman, R., Sorine, M.: Modeling and estimation of the cardiac electromechanical activity. Comput. Struct. 84, 1743–1759 (2006)
Sermesant, M., Forest, C., Pennec, X., Delingette, H., Ayache, N.: Deformable biomechanical models: application to 4D cardiac image analysis. Medical Image Analysis 7(4), 475–488 (2003)
Vaillant, M., Glaunès, J.: Surface matching via currents. In: Christensen, G.E., Sonka, M. (eds.) IPMI 2005. LNCS, vol. 3565, pp. 381–392. Springer, Heidelberg (2005)
Xi, J., Lamata, P., Lee, J., Moireau, P., Chapelle, D., Smith, N.P.: Myocardial transversely isotropic material parameter estimation from in-silico measurements based on a reduced-order unscented Kalman filter. Journal of the Mechanical Behavior of Biomedical Materials 4(7), 1090–1102 (2011)
Xi, J., Lamata, P., Niederer, S., Land, S., Shi, W., Zhuang, X., Ourselin, S., Duckett, S.G., Shetty, A.K., Rinaldi, C.A., Rueckert, D., Razavi, R., Smith, N.P.: The estimation of patient-specific cardiac diastolic functions from clinical measurements. In: Medical Image Analysis, pp. 1–14 (2012)
Younes, L.: Shapes and diffeomorphisms. Springer (2010)
Author information
Authors and Affiliations
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2013 Springer-Verlag Berlin Heidelberg
About this paper
Cite this paper
Imperiale, A., Routier, A., Durrleman, S., Moireau, P. (2013). Improving Efficiency of Data Assimilation Procedure for a Biomechanical Heart Model by Representing Surfaces as Currents. In: Ourselin, S., Rueckert, D., Smith, N. (eds) Functional Imaging and Modeling of the Heart. FIMH 2013. Lecture Notes in Computer Science, vol 7945. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-38899-6_41
Download citation
DOI: https://doi.org/10.1007/978-3-642-38899-6_41
Publisher Name: Springer, Berlin, Heidelberg
Print ISBN: 978-3-642-38898-9
Online ISBN: 978-3-642-38899-6
eBook Packages: Computer ScienceComputer Science (R0)