Skip to main content

Stem Cell Engineering Using Transducible Cre Recombinase

  • Protocol
Tissue Engineering

Part of the book series: Methods in Molecular Medicine™ ((MIMM,volume 140))

Summary

Embryonic stem (ES) cells have become a major focus of scientific interest both as a potential donor source for regenerative medicine and as a model system for tissue development and pathobiology. Tight and efficient methods for genetic engineering are required to exploit ES cells as disease models and to generate specific somatic phenotypes by lineage selection or instruction. In 1990s, the application of site-specific recombinases (SSRs) such as Cre has revolutionized mammalian genetics by providing a reliable and efficient means to delete, insert, invert, or exchange chromosomal DNA in a conditional manner. Despite these significant advances, the available technology still suffers from limitations, including unwanted side effects elicited by the random integration of Cre expression vectors and leak activity of inducible or presumptive cell type-specific Cre expression systems. These challenges can be met by combining the Cre/loxP recombination system with direct intracellular delivery of Cre by protein transduction, thus enabling rapid and highly efficient conditional mutagenesis in ES cells and ES cell-derived somatic progeny. Modified recombinant variants of Cre protein induce recombination in virtually 100% of human ES (hES) and mouse ES (mES) cells. Here, we present methods for generating purified transducible Cre protein from Escherichia coli and its transduction into ES cells and their neural progeny.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 129.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 169.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Sauer, B. and Henderson, N. (1988) Site-specific DNA recombination in mammalian cells by the Cre recombinase of bacteriophage P1. Proc. Natl. Acad. Sci. U. S. A. 85, 5166–5170.

    Article  CAS  Google Scholar 

  2. Branda, C. S. and Dymecki, S. M. (2004) Talking about a revolution: the impact of site-specific recombinases on genetic analyses in mice. Dev. Cell 6, 7–28.

    Article  CAS  Google Scholar 

  3. Lewandoski, M. (2001) Conditional control of gene expression in the mouse. Nat. Rev. Genet. 2, 743–755.

    Article  CAS  Google Scholar 

  4. Kuhn, R. and Torres, R. M. (1997) Laboratory Protocols for Conditional Gene Targeting, Oxford University Press. (Oxford, New York, Tokyo).

    Google Scholar 

  5. Rohlmann, A., Gotthardt, M., Willnow, T. E., Hammer, R. E., and Herz, J. (1996) Sustained somatic gene inactivation by viral transfer of Cre recombinase. Nat. Biotechnol. 14, 1562–1565.

    Article  CAS  Google Scholar 

  6. Shibata, H., Toyama, K., Shioya, H., Ito, M., Hirota, M., Hasegawa, S., Matsumoto, H., Takano, H., Akiyama, T., Toyoshima, K., Kanamaru, R., Kanegae, Y., Saito, I., Nakamura, Y., Shiba, K., and Noda, T. (1997) Rapid colorectal adenoma formation initiated by conditional targeting of the Apc gene. Science 278, 120–123.

    Article  CAS  Google Scholar 

  7. Badorf, M., Edenhofer, F., Dries, V., Kochanek, S., and Schiedner, G. (2002) Efficient in vitro and in vivo excision of floxed sequences with a high-capacity adenoviral vector expressing Cre recombinase. Genesis 33, 119–124.

    Article  CAS  Google Scholar 

  8. Metzger, D., Clifford, J., Chiba, H., and Chambon, P. (1995) Conditional site-specific recombination in mammalian cells using a ligand-dependent chimeric Cre recombinase. Proc. Natl. Acad. Sci. U. S. A. 92, 6991–6995.

    Article  CAS  Google Scholar 

  9. Kellendonk, C., Tronche, F., Monaghan, A. P., Angrand, P. O., Stewart, F., and Schutz, G. (1996) Regulation of Cre recombinase activity by the synthetic steroid RU 486. Nucleic Acids Res. 24, 1404–1411.

    Article  CAS  Google Scholar 

  10. Wunderlich, F. T., Wildner, H., Rajewsky, K., and Edenhofer, F. (2001) New variants of inducible Cre recombinase: a novel mutant of Cre-PR fusion protein exhibits enhanced sensitivity and an expanded range of inducibility. Nucleic Acids Res. 29, E47.

    Article  CAS  Google Scholar 

  11. Brooks, H., Lebleu, B., and Vives, E. (2005) Tat peptide-mediated cellular delivery: back to basics. Adv. Drug Deliv. Rev. 57, 559–577.

    Article  CAS  Google Scholar 

  12. Dietz, G. P. and Bahr, M. (2004) Delivery of bioactive molecules into the cell: the Trojan horse approach. Mol. Cell Neurosci. 27, 85–131.

    Article  CAS  Google Scholar 

  13. Wadia, J. S. and Dowdy, S. F. (2003) Modulation of cellular function by TAT mediated transduction of full length proteins. urr. Protein Pept. Sci. 4, 97–104.

    Article  CAS  Google Scholar 

  14. Schwarze, S. R., Ho, A., Vocero-Akbani, A., and Dowdy, S. F. (1999) In vivo protein transduction: delivery of a biologically active protein into the mouse. Science 285, 1569–1572.

    Article  CAS  Google Scholar 

  15. Caron, N. J., Torrente, Y., Camirand, G., Bujold, M., Chapdelaine, P., Leriche, K., Bresolin, N., and Tremblay, J. P. (2001) Intracellular delivery of a Tat-eGFP fusion protein into muscle cells. Mol. Ther. 3, 310–318.

    Article  CAS  Google Scholar 

  16. Takenobu, T., Tomizawa, K., Matsushita, M., Li, S. T., Moriwaki, A., Lu, Y. F., and Matsui, H. (2002) Development of p53 protein transduction therapy using membrane-permeable peptides and the application to oral cancer cells. Mol. Cancer Ther. 1, 1043–1049.

    CAS  Google Scholar 

  17. Noguchi, H., Kaneto, H., Weir, G. C., and Bonner-Weir, S. (2003) PDX-1 protein containing its own antennapedia-like protein transduction domain can transduce pancreatic duct and islet cells. Diabetes 52, 1732–1737.

    Article  CAS  Google Scholar 

  18. Guelen, L., Paterson, H., Gaken, J., Meyers, M., Farzaneh, F., and Tavassoli, M. (2004) TAT-apoptin is efficiently delivered and induces apoptosis in cancer cells. Oncogene 23, 1153–1165.

    Article  CAS  Google Scholar 

  19. Patsch, C. and Edenhofer, F. (2007) Conditional mutagenesis by cell permeable proteins: potential, limitations and prospects, in Handbook of Experimental Pharmacology, 178,203–232.

    Article  CAS  Google Scholar 

  20. Jo, D., Nashabi, A., Doxsee, C., Lin, Q., Unutmaz, D., Chen, J., and Ruley, H. E. (2001) Epigenetic regulation of gene structure and function with a cell-permeable Cre recombinase. Nat. Biotechnol. 19, 929–933.

    Article  CAS  Google Scholar 

  21. Peitz, M., Pfannkuche, K., Rajewsky, K., and Edenhofer, F. (2002) Ability of the hydrophobic FGF and basic TAT peptides to promote cellular uptake of recombinant Cre recombinase: a tool for efficient genetic engineering of mammalian genomes. Proc. Natl. Acad. Sci. U. S. A. 99, 4489–4494.

    Article  CAS  Google Scholar 

  22. Will, E., Klump, H., Heffner, N., Schwieger, M., Schiedlmeier, B., Ostertag, W., Baum, C., and Stocking, C. (2002) Unmodified Cre recombinase crosses the membrane. Nucleic Acids Res. 30, e59.

    Article  Google Scholar 

  23. Joshi, S. K., Hashimoto, K., and Koni, P. A. (2002) Induced DNA recombination by Cre recombinase protein transduction. Genesis 33, 48–54.

    Article  CAS  Google Scholar 

  24. Lin, Q., Daewoong, J., Grebre-Amlak, K. D., and Ruley, E. (2004) Enhanced cell-permeant Cre protein for site-specific recombination in cultured cells. BMC Biotechnol. 4, 25.

    Article  Google Scholar 

  25. Nolden, L., Edenhofer, F., Haupt, S., Koch, P., Wunderlich, F. T., Siemen, H., and Brustle, O. (2006) Site specific recombination in human embryonic stem cells induced by cell permeable Cre recombinase permits efficient conditional gene modification, Nat. Methods 3, 461–467.

    Article  CAS  Google Scholar 

  26. Zhang, Y., Riesterer, C., Ayrall, A. M., Sablitzky, F., Littlewood, T. D., and Reth, M. (1996) Inducible site-directed recombination in mouse embryonic stem cells. Nucleic Acids Res. 24, 543–548.

    Article  CAS  Google Scholar 

  27. Utomo, A. R., Nikitin, A. Y., and Lee, W. H. (1999) Temporal, spatial, and cell type-specific control of Cre-mediated DNA recombination in transgenic mice. Nat. Biotechnol. 17, 1091–1096.

    Article  CAS  Google Scholar 

  28. Zhang, S. C., Wernig, M., Duncan, I. D., Brüstle, O., and Thomson, J. A. (2001) In vitro differentiation of transplantable neural precursors from human embryonic stem cells. Nat. Biotechnol. 19, 1129–1133.

    Article  CAS  Google Scholar 

  29. Brüstle, O., Choudhary, K., Karram, K., Hüttner, A., Murray, K., Dubois-Dalcq, M., and McKay, R. D. G. (1998) Chimeric brains generated by intraventricular transplantation of fetal human brain cells into embryonic rats. Nat. Biotechnol. 16,1040–1044.

    Article  Google Scholar 

  30. Soriano, P. (1999) Generalized lacZ expression with the ROSA26 Cre reporter strain. Nat. Genet. 21, 70–71.

    Article  CAS  Google Scholar 

  31. Mao, X., Fujiwara, Y., Chapdelaine, A., Yang, H., and Orkin, S. H. (2001) Activation of EGFP expression by Cre-mediated excision in a new ROSA26 reporter mouse strain. Blood 97, 324–326.

    Article  CAS  Google Scholar 

  32. Novak, A., Guo, C., Yang, W., Nagy, A., and Lobe, C. G. (2000) Z/EG, a double reporter mouse line that expresses enhanced green fluorescent protein upon Cre-mediated excision. Genesis 28, 147–155.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2007 Humana Press Inc.

About this protocol

Cite this protocol

Nolden, L., Edenhofer, F., Peitz, M., Brüstle, O. (2007). Stem Cell Engineering Using Transducible Cre Recombinase. In: Hauser, H., Fussenegger, M. (eds) Tissue Engineering. Methods in Molecular Medicine™, vol 140. Humana Press. https://doi.org/10.1007/978-1-59745-443-8_2

Download citation

  • DOI: https://doi.org/10.1007/978-1-59745-443-8_2

  • Publisher Name: Humana Press

  • Print ISBN: 978-1-58829-756-3

  • Online ISBN: 978-1-59745-443-8

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics