Skip to main content

Purification of Exosomes from Primary Schwann Cells, RNA Extraction, and Next-Generation Sequencing of Exosomal RNAs

  • Protocol
  • First Online:
Schwann Cells

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1739))

Abstract

Exosomes are small (30–150 nm) vesicles of endosomal origin secreted by most cell types. Exosomes contain proteins, lipids, and RNA species including microRNA, mRNA, rRNA, and long noncoding RNAs. The mechanisms associated with exosome synthesis and cargo loading are still poorly understood. A role for exosomes in intercellular communication has been reported in physiological and pathological conditions both in vitro and in vivo. Previous studies have suggested that Schwann cell-derived exosomes regulate neuronal functions, but the mechanisms are still unclear. Here, we describe protocols to establish rat neonatal Schwann cell cultures and to isolate exosomes from the conditioned medium of these cultures by differential ultracentrifugation. To analyze the RNA content of Schwann cell-derived exosomes, we detail protocols for RNA extraction and next-generation sequencing using miRNA and mRNA libraries. The protocol also includes RNA sequencing of Schwann cells, which allows the comparison between RNA content from cells and the secreted exosomes. Identification of RNAs present in Schwann cell-derived exosomes is a valuable tool to understand novel roles of Schwann cells in neuronal function in health and disease.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 84.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 109.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 159.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Similar content being viewed by others

References

  1. Montecalvo A, Shufesky WJ, Stolz DB et al (2008) Exosomes as a short-range mechanism to spread alloantigen between dendritic cells during T cell allorecognition. J Immunol 180:3081–3090

    Article  CAS  PubMed  Google Scholar 

  2. Vella LJ, Sharples RA, Lawson VA et al (2007) Packaging of prions into exosomes is associated with a novel pathway of PrP processing. J Pathol 211:582–590. https://doi.org/10.1002/path.2145

    Article  CAS  PubMed  Google Scholar 

  3. Johnstone RM, Adam M, Hammond JR et al (1987) Vesicle formation during reticulocyte maturation. Association of plasma membrane activities with released vesicles (exosomes). J Biol Chem 262:9412–9420

    CAS  PubMed  Google Scholar 

  4. Peinado H, Alečković M, Lavotshkin S et al (2012) Melanoma exosomes educate bone marrow progenitor cells toward a pro-metastatic phenotype through MET. Nat Med 18:883–891. https://doi.org/10.1038/nm.2753

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  5. Mathivanan S, Ji H, Simpson RJ (2010) Exosomes: extracellular organelles important in intercellular communication. J Proteome 73:1907–1920. https://doi.org/10.1016/j.jprot.2010.06.006

    Article  CAS  Google Scholar 

  6. Valadi H, Ekström K, Bossios A et al (2007) Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells. Nat Cell Biol 9:654–659. https://doi.org/10.1038/ncb1596

    Article  CAS  PubMed  Google Scholar 

  7. Krek A, Grün D, Poy MN et al (2005) Combinatorial microRNA target predictions. Nat Genet 37:495–500. https://doi.org/10.1038/ng1536

    Article  CAS  PubMed  Google Scholar 

  8. Mittelbrunn M, Gutiérrez-Vázquez C, Villarroya-Beltri C et al (2011) Unidirectional transfer of microRNA-loaded exosomes from T cells to antigen-presenting cells. Nat Commun 2:282. https://doi.org/10.1038/ncomms1285

    Article  PubMed  PubMed Central  Google Scholar 

  9. Lin J, Li J, Huang B et al (2015) Exosomes: novel biomarkers for clinical diagnosis. Sci World J 2015:1–8. https://doi.org/10.1155/2015/657086

    Google Scholar 

  10. Zhang J, Li S, Li L et al (2015) Exosome and exosomal microRNA: trafficking, sorting, and function. Genomics Proteomics Bioinformatics 13:17–24. https://doi.org/10.1016/j.gpb.2015.02.001

    Article  PubMed  PubMed Central  Google Scholar 

  11. Skog J, Würdinger T, van Rijn S et al (2008) Glioblastoma microvesicles transport RNA and proteins that promote tumour growth and provide diagnostic biomarkers. Nat Cell Biol 10:1470–1476. https://doi.org/10.1038/ncb1800

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  12. Ludwig A-K, Giebel B (2012) Exosomes: small vesicles participating in intercellular communication. Int J Biochem Cell Biol 44:11–15. https://doi.org/10.1016/j.biocel.2011.10.005

    Article  CAS  PubMed  Google Scholar 

  13. Schageman J, Zeringer E, Li M et al (2013) The complete exosome workflow solution: from isolation to characterization of RNA cargo. Biomed Res Int 2013:253957–253915. https://doi.org/10.1155/2013/253957

    Article  PubMed  PubMed Central  Google Scholar 

  14. Jenjaroenpun P, Kremenska Y, Nair VM et al (2013) Characterization of RNA in exosomes secreted by human breast cancer cell lines using next-generation sequencing. PeerJ 1:e201. https://doi.org/10.7717/peerj.201

    Article  PubMed  PubMed Central  Google Scholar 

  15. Lopez-Verrilli MA, Picou F, Court FA (2013) Schwann cell-derived exosomes enhance axonal regeneration in the peripheral nervous system. Glia 61:1795–1806. https://doi.org/10.1002/glia.22558

    Article  PubMed  Google Scholar 

  16. Segura E, Nicco C, Lombard B et al (2005) ICAM-1 on exosomes from mature dendritic cells is critical for efficient naive T-cell priming. Blood 106:216–223. https://doi.org/10.1182/blood-2005-01-0220

    Article  CAS  PubMed  Google Scholar 

  17. van Niel G, Mallegol J, Bevilacqua C et al (2003) Intestinal epithelial exosomes carry MHC class II/peptides able to inform the immune system in mice. Gut 52:1690–1697

    Article  PubMed  PubMed Central  Google Scholar 

  18. Thery C, Amigorena S, Raposo G, Clayton A (2006) Isolation and characterization of exosomes from cell culture supernatants and biological fluids. Curr Protoc Cell Biol Chapter 3:Unit 3.22–Un3.22.29. https://doi.org/10.1002/0471143030.cb0322s30

    PubMed  Google Scholar 

  19. Liu Z, Jin Y-Q, Chen L et al (2015) Specific marker expression and cell state of Schwann cells during culture in vitro. PLoS One 10:e0123278. https://doi.org/10.1371/journal.pone.0123278

    Article  PubMed  PubMed Central  Google Scholar 

Download references

Acknowledgments

We wish to thank all the members of the Court Lab for their contributions to this protocol. This work was supported by the Center for Integrative Biology, Universidad Mayor, FONDECYT-1150766, Geroscience Center for Brain Health and Metabolism (FONDAP-15150012), Ring Initiative ACT1109, and Canada-Israel Health Research Initiative, jointly funded by the Canadian Institutes of Health Research; the Israel Science Foundation; the International Development Research Centre, Canada; and the Azrieli Foundation, Canada.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Felipe A. Court .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2018 Springer Science+Business Media, LLC

About this protocol

Check for updates. Verify currency and authenticity via CrossMark

Cite this protocol

De Gregorio, C., Díaz, P., López-Leal, R., Manque, P., Court, F.A. (2018). Purification of Exosomes from Primary Schwann Cells, RNA Extraction, and Next-Generation Sequencing of Exosomal RNAs. In: Monje, P., Kim, H. (eds) Schwann Cells. Methods in Molecular Biology, vol 1739. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-7649-2_19

Download citation

  • DOI: https://doi.org/10.1007/978-1-4939-7649-2_19

  • Published:

  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-7648-5

  • Online ISBN: 978-1-4939-7649-2

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics