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Labeling the ER for Light and Fluorescence Microscopy

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The Plant Endoplasmic Reticulum

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1691))

Abstract

The ER is a highly dynamic network of tubules and membrane sheets. Hence imaging this organelle in its native and mobile state is of great importance. Here we describe methods of labeling the native ER using fluorescent proteins and lipid dyes as well as methods for immunolabeling on plant tissue.

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References

  1. Wang P, Hawkins TJ, Richardson C, Cummins I, Deeks MJ, Sparkes I, Hawes C, Hussey PJ (2014) The plant cytoskeleton, NET3C, and VAP27 mediate the link between the plasma membrane and endoplasmic reticulum. Curr Biol 24:1397–1405

    Article  CAS  PubMed  Google Scholar 

  2. Boevink P, Santa Cruz S, Hawes C, Harris N, Oparka KJ (1996) Virus mediated delivery of the green fluorescent protein to the endoplasmic reticulum of plant cell. Plant J 10:35–941

    Article  Google Scholar 

  3. Terasaki M, Song J, Wong JR, Weiss MJ, Chen LB (1984) Localization of endoplasmic reticulum in living and glutaraldehyde-fixed cells with fluorescent dyes. Cell 38:101–108

    Article  CAS  PubMed  Google Scholar 

  4. Quader H, Schnepf E (1986) Endoplasmic reticulum and cytoplasmic streaming: fluorescence microscopical observations in adaxial epidermis cells of onion bulb scales. Protoplasma 131:50–252

    Article  Google Scholar 

  5. Sparkes I, Tolley N, Aller I, Svozil J, Osterrieder A, Botchway S, Mueller C, Frigerio L, Hawes C (2010) Five Arabidopsis reticulon isoforms share endoplasmic reticulum location, topology, and membrane-shaping properties. Plant Cell 22:1333–1343

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  6. Irons SL, Evans DE, Brandizzi F (2003) The first 238 amino acids of the human lamin B receptor are targeted to the nuclear envelope in plants. J Exp Bot 54:943–950

    Google Scholar 

  7. Ivanov S, Harrison MJ (2014) A set of fluorescent protein-based markers expressed from constitutive and arbuscular mycorrhiza-inducible promoters to label organelles, membranes and cytoskeletal elements in Medicago truncatula. Plant J 80:1151–1163

    Article  CAS  PubMed  Google Scholar 

  8. Lee H, Sparkes I, Gattolin S, Dzimitrowicz N, Roberts LM, Hawes C, Frigerio L (2013) An Arabidopsis reticulon and the atlastin homologue RHD3-like2 act together in shaping the tubular endoplasmic reticulum. New Phytol 197:481–419

    Article  CAS  PubMed  Google Scholar 

  9. Denecke J, De Rycke R, Botterman J (1992) Plant and mammalian sorting signals for protein retention in the endoplasmic reticulum contain a conserved epitope. EMBO J 11:2345–2355

    CAS  PubMed  PubMed Central  Google Scholar 

  10. Gomord V, Denmat LA, Fitchette-Lainé AC, Satiat-Jeunemaitre B, Hawes C, Faye L (1997) The C-terminal HDEL sequence is sufficient for retention of secretory proteins in the endoplasmic reticulum (ER) but promotes vacuolar targeting of proteins that escape the ER. Plant J 11:313–325

    Article  CAS  PubMed  Google Scholar 

  11. Satiat-Jeunemaitre B, Hawes C (2001) Immunocytochemistry for light microscopy. In: Hawes C, Satiat-Jeunemaitre B (eds) Plant cell biology: practical approach. O.U.P., New York, pp 207–233. (Chapter 10)

    Google Scholar 

  12. Wasteneys G (1997) Freeze shattering: a simple and effective method for permeabilizing higher plant cell walls. J Microsc 188:51–61

    Article  CAS  PubMed  Google Scholar 

  13. Wang P, Richardson C, Hawkins TJ, Sparkes I, Hawes C, Hussey PJ (2016) Plant VAP27 proteins: domain characterization, intracellular localization and role in plant development. New Phytol 210:1311–1326

    Article  CAS  PubMed  Google Scholar 

  14. Sparkes IA, Runions J, Kearns A, Hawes C (2006) Rapid, transient expression of fluorescent fusion proteins in tobacco plants and generation of stably transformed plants. Nat Protoc 1:2019–2025

    Article  CAS  PubMed  Google Scholar 

  15. Kriechbaumer V, Shaw R, Mukherjee J, Bowsher CG, Harrison AM, Abell BM (2009) Subcellular distribution of tail-anchored proteins in Arabidopsis. Traffic 10:1753–1764

    Article  CAS  PubMed  Google Scholar 

  16. Karimi M, De Meyer B, Hilson P (2005) Molecular cloning in plant cells. Trends Plant Sci 10:103–105

    Article  CAS  PubMed  Google Scholar 

  17. Lilley BN, Ploegh HL (2004) A membrane protein required for dislocation of misfolded proteins from the ER. Nature 24:834–840

    Google Scholar 

  18. Kriechbaumer V, Botchway SW, Slade SE, Knox K, Frigerio L, Oparka K, Hawes C (2015) Reticulomics: protein-protein interaction studies with two plasmodesmata-localized reticulon family proteins identify binding partners enriched at plasmodesmata, endoplasmic reticulum, and the plasma membrane. Plant Physiol 169:1933–1945

    CAS  PubMed  PubMed Central  Google Scholar 

  19. Matsushima R, Fukao Y, Nishimura M. Hara-Nishimura I (2004) NAI1 gene encodes a basic-helix-loop-helix-type putative transcription factor that regulates the formation of an endoplasmic reticulum-derived structure, the ER body. The Plant Cell 16:1536–1549

    Google Scholar 

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Correspondence to Chris Hawes .

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Hawes, C., Wang, P., Kriechbaumer, V. (2018). Labeling the ER for Light and Fluorescence Microscopy. In: Hawes, C., Kriechbaumer, V. (eds) The Plant Endoplasmic Reticulum . Methods in Molecular Biology, vol 1691. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-7389-7_1

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  • DOI: https://doi.org/10.1007/978-1-4939-7389-7_1

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  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-7388-0

  • Online ISBN: 978-1-4939-7389-7

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