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Isolation of Extracellular Vesicles by Ultracentrifugation

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Extracellular Vesicles

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1660))

Abstract

Extracellular vesicles (EVs) represent a group of heterogeneous vesicles that can be obtained from almost all biofluids. EVs, including microvesicles, exosomes, and apoptotic bodies , can deliver bioactive cargos and signaling molecules. Various physiological roles and pathophysiological roles for EVs in diseases such as cancer, infectious diseases, endocrine diseases, and neurodegenerative disorders have been recognized. These observations highlight EVs as potential novel biomarkers and targets for therapeutic intervention. One of the major limitations in the use of EVs for diagnosis and therapeutic purposes is the lack of standardization of isolation techniques. Here, we describe protocols for ultracentrifugation and sucrose gradient isolation methods, which are the current gold standard, and are the most studied methods for EV isolation.

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References

  1. Yanez-Mo M, Siljander PR, Andreu Z, Zavec AB, Borras FE, Buzas EI, Buzas K, Casal E, Cappello F, Carvalho J, Colas E, Cordeiro-da Silva A, Fais S, Falcon-Perez JM, Ghobrial IM, Giebel B, Gimona M, Graner M, Gursel I, Gursel M, Heegaard NH, Hendrix A, Kierulf P, Kokubun K, Kosanovic M, Kralj-Iglic V, Kramer-Albers EM, Laitinen S, Lasser C, Lener T, Ligeti E, Line A, Lipps G, Llorente A, Lotvall J, Mancek-Keber M, Marcilla A, Mittelbrunn M, Nazarenko I, Nolte-'t Hoen EN, Nyman TA, O'Driscoll L, Olivan M, Oliveira C, Pallinger E, Del Portillo HA, Reventos J, Rigau M, Rohde E, Sammar M, Sanchez-Madrid F, Santarem N, Schallmoser K, Ostenfeld MS, Stoorvogel W, Stukelj R, Van der Grein SG, Vasconcelos MH, Wauben MH, De Wever O (2015) Biological properties of extracellular vesicles and their physiological functions. J Extracell Vesicles 4:27066. doi:10.3402/jev.v4.27066

    Article  PubMed  Google Scholar 

  2. Raposo G, Stoorvogel W (2013) Extracellular vesicles: exosomes, microvesicles, and friends. J Cell Biol 200(4):373–383. doi:10.1083/jcb.201211138

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  3. Jia S, Zocco D, Samuels ML, Chou MF, Chammas R, Skog J, Zarovni N, Momen-Heravi F, Kuo WP (2014) Emerging technologies in extracellular vesicle-based molecular diagnostics. Expert Rev Mol Diagn 14(3):307–321. doi:10.1586/14737159.2014.893828

    Article  CAS  PubMed  Google Scholar 

  4. Momen-Heravi F, Balaj L, Alian S, Mantel PY, Halleck AE, Trachtenberg AJ, Soria CE, Oquin S, Bonebreak CM, Saracoglu E, Skog J, Kuo WP (2013) Current methods for the isolation of extracellular vesicles. Biol Chem 394(10):1253–1262. doi:10.1515/hsz-2013-0141

    Article  CAS  PubMed  Google Scholar 

  5. Mathivanan S, Fahner CJ, Reid GE, Simpson RJ (2012) ExoCarta 2012: database of exosomal proteins, RNA and lipids . Nucleic Acids Res 40(Database issue):D1241–D1244. doi:10.1093/nar/gkr828

  6. Bukong TN, Momen-Heravi F, Kodys K, Bala S, Szabo G (2014) Exosomes from hepatitis C infected patients transmit HCV infection and contain replication competent viral RNA in complex with Ago2-miR122-HSP90. PLoS Pathog 10(10):e1004424. doi:10.1371/journal.ppat.1004424

    Article  PubMed  PubMed Central  Google Scholar 

  7. Momen-Heravi F, Balaj L, Alian S, Trachtenberg AJ, Hochberg FH, Skog J, Kuo WP (2012) Impact of biofluid viscosity on size and sedimentation efficiency of the isolated microvesicles. Front Physiol 3:162. doi:10.3389/fphys.2012.00162

  8. Cvjetkovic A, Lotvall J, Lasser C (2014) The influence of rotor type and centrifugation time on the yield and purity of extracellular vesicles. J Extracell Vesicles 3. doi:10.3402/jev.v3.23111

  9. Langer K, Balthasar S, Vogel V, Dinauer N, von Briesen H, Schubert D (2003) Optimization of the preparation process for human serum albumin (HSA) nanoparticles. Int J Pharm 257(1–2):169–180

    Article  CAS  PubMed  Google Scholar 

  10. Momen-Heravi F, Balaj L, Alian S, Tigges J, Toxavidis V, Ericsson M, Distel RJ, Ivanov AR, Skog J, Kuo WP (2012) Alternative methods for characterization of extracellular vesicles. Front Physiol 3:354. doi:10.3389/fphys.2012.00354

  11. van der Pol E, Boing AN, Harrison P, Sturk A, Nieuwland R (2012) Classification, functions, and clinical relevance of extracellular vesicles. Pharmacol Rev 64(3):676–705. doi:10.1124/pr.112.005983

    Article  PubMed  Google Scholar 

  12. Witwer KW, Buzas EI, Bemis LT, Bora A, Lasser C, Lotvall J, Nolte-'t Hoen EN, Piper MG, Sivaraman S, Skog J, Thery C, Wauben MH, Hochberg F (2013) Standardization of sample collection, isolation and analysis methods in extracellular vesicle research. J Extracell Vesicles 2. doi:10.3402/jev.v2i0.20360

  13. Momen-Heravi F, Bala S, Bukong T, Szabo G (2014) Exosome-mediated delivery of functionally active miRNA-155 inhibitor to macrophages. Nanomedicine 10(7):1517–1527. doi:10.1016/j.nano.2014.03.014

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  14. Kooijmans SA, Stremersch S, Braeckmans K, de Smedt SC, Hendrix A, Wood MJ, Schiffelers RM, Raemdonck K, Vader P (2013) Electroporation-induced siRNA precipitation obscures the efficiency of siRNA loading into extracellular vesicles. J Control Release 172(1):229–238. doi:10.1016/j.jconrel.2013.08.014

    Article  CAS  PubMed  Google Scholar 

  15. Thery C, Amigorena S, Raposo G, Clayton A (2006) Isolation and characterization of exosomes from cell culture supernatants and biological fluids. Curr Protoc Cell Biol Chapter 3:Unit 3 22. doi:10.1002/0471143030.cb0322s30

  16. Baietti MF, Zhang Z, Mortier E, Melchior A, Degeest G, Geeraerts A, Ivarsson Y, Depoortere F, Coomans C, Vermeiren E, Zimmermann P, David G (2012) Syndecan-syntenin-ALIX regulates the biogenesis of exosomes. Nat Cell Biol 14(7):677–685. doi:10.1038/ncb2502

    Article  CAS  PubMed  Google Scholar 

  17. Tauro BJ, Mathias RA, Greening DW, Gopal SK, Ji H, Kapp EA, Coleman BM, Hill AF, Kusebauch U, Hallows JL, Shteynberg D, Moritz RL, Zhu HJ, Simpson RJ (2013) Oncogenic H-ras reprograms Madin-Darby canine kidney (MDCK) cell-derived exosomal proteins following epithelial-mesenchymal transition. Mol Cell Proteomics 12(8):2148–2159. doi:10.1074/mcp.M112.027086

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  18. Cantin R, Diou J, Belanger D, Tremblay AM, Gilbert C (2008) Discrimination between exosomes and HIV-1: purification of both vesicles from cell-free supernatants. J Immunol Methods 338(1–2):21–30. doi:10.1016/j.jim.2008.07.007

    Article  CAS  PubMed  Google Scholar 

  19. Iwai K, Minamisawa T, Suga K, Yajima Y, Shiba K (2016) Isolation of human salivary extracellular vesicles by iodixanol density gradient ultracentrifugation and their characterizations. J Extracell Vesicles 5:30829. doi:10.3402/jev.v5.30829

  20. Palma J, Yaddanapudi SC, Pigati L, Havens MA, Jeong S, Weiner GA, Weimer KM, Stern B, Hastings ML, Duelli DM (2012) MicroRNAs are exported from malignant cells in customized particles. Nucleic Acids Res 40(18):9125–9138. doi:10.1093/nar/gks656

    Article  CAS  PubMed  PubMed Central  Google Scholar 

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Correspondence to Fatemeh Momen-Heravi DDS, PhD, MPH .

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Momen-Heravi, F. (2017). Isolation of Extracellular Vesicles by Ultracentrifugation. In: Kuo, W., Jia, S. (eds) Extracellular Vesicles. Methods in Molecular Biology, vol 1660. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-7253-1_3

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  • DOI: https://doi.org/10.1007/978-1-4939-7253-1_3

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  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-7251-7

  • Online ISBN: 978-1-4939-7253-1

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