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Genomics-Based Breeding Technology

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Genetics and Genomics of Rice

Part of the book series: Plant Genetics and Genomics: Crops and Models ((PGG,volume 5))

Abstract

The completed gnome sequences of rice subspecies, indica and japonica, as well as the characterization of a large number of important trait-related genes, laid a sound foundation for genomics-based breeding. Re-sequencing thousands of rice germplasm accessions by next-generation sequencing technologies provided breeders with enormous amount of sequences for genetic marker development. Additionally, high-throughput marker assays were recently made available to breeders, and subsequently large-scale genotyping became economically and timely feasible. All of these together speeded up the development and implementation of genomics-based breeding. In the foreseeable future, genomics-based breeding will potentially become a common practice in rice variety development. This chapter reviews the recent advances in high-throughput genetic marker development and assay technologies and also provides a few examples of strategies for practicing genomics-based breeding in rice.

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Acknowledgments

We thank Dr. Shunyuan Xiao for helpful comments and discussion. This research is partially supported by China 863 research program (2012AA10A304). We apologize for not being able to cite some of the related publications because of the scope.

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Authors and Affiliations

  1. Genomic Breeding, Life Science and Technology Center, China National Seed Group Co. Ltd., 666 Gaoxin Road, Wuhan East Lake Hi-tech Development Zone, Wuhan, Hubei, 430075, China

    Fasong Zhou Ph.D. & Huihui Yu Ph.D.

  2. College of Life Sciences, Peking University, Beijing, China

    Hang He Ph.D. & Haodong Chen Ph.D.

  3. UMR DIADE, Institut de Recherche pour le Développement, Montpellier, France

    Mathias Lorieux Ph.D.

  4. National Center of Molecular Breeding, Huazhong Agricultural University, Wuhan, Hubei, China

    Yuqing He Ph.D.

Authors
  1. Fasong Zhou Ph.D.
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  2. Hang He Ph.D.
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  3. Haodong Chen Ph.D.
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  4. Huihui Yu Ph.D.
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  5. Mathias Lorieux Ph.D.
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  6. Yuqing He Ph.D.
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Corresponding author

Correspondence to Fasong Zhou Ph.D. .

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Editors and Affiliations

  1. of Crop Genetic Improvement, Huazhong Agricultural University National Key Laboratory, Wuhan, China, People's Republic

    Qifa Zhang

  2. The School of Plant Sciences, University of Arizona Arizona Genomics Institute, Tucson, Arizona, USA

    Rod A. Wing

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Zhou, F., He, H., Chen, H., Yu, H., Lorieux, M., He, Y. (2013). Genomics-Based Breeding Technology. In: Zhang, Q., Wing, R. (eds) Genetics and Genomics of Rice. Plant Genetics and Genomics: Crops and Models, vol 5. Springer, New York, NY. https://doi.org/10.1007/978-1-4614-7903-1_22

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