Collection
Datasets to Advance Agriculture
- Submission status
- Closed
Current projections by the UN predict that food production needs to increase by 70% in the next 25 years to feed the world population. As nations grapple with an increasingly variable climate and growing restrictions on energy use, agriculture faces the combined challenge of maximising productivity while remaining sustainable.
Solutions lie in the wealth of data produced by the fields of Plant Omics and Precision Agriculture. When applied such research can increase the hardiness and yield of a crop plant and apply these gains at scale. This collection seeks to bring these disciplines together, curating a series of data sets and articles focused on improving the productivity and sustainably of agriculture methods across the globe.
This collection welcomes Data Note* Articles covering:
• Tree and crop plant Omics: phenomics, ionomics, genomics, transcriptomics, proteomics, lipidomics, metabolomics and panomics
• Natural resource variables: soil and landscape variability, soil mapping, geostatistics, geographic information systems, microclimate, weather forecasting, remote sensing, management units, and digital elevation models
• Environmental data: Crop protection chemicals, sediments, leaching, runoff, practices, field, watershed, artificial drainage, ground and surface water
• Management data: Sampling techniques, site-specific nutrient and crop protection chemical recommendation, crop quality, tillage, seed density, seed variety, yield mapping, remote sensing
• Economic data: Best management practices, crop quality, technology cost, sustainability, social impacts, marketing, cooperatives, farm scale and crop type
• Commentary articles discussing Methods of synthesising and applying these data across agriculture.
*Research Note articles will also be considered if submitted with an accompanying Data Note
Articles (13 in this collection)
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2020-2021 field seasons of Maize GxE project within the Genomes to Fields Initiative
Authors (first, second and last of 35)
- Dayane Cristina Lima
- Alejandro Castro Aviles
- Natalia de Leon
- Content type: Data Note
- Open Access
- Published: 14 September 2023
- Article: 219
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Dual host-pathogen small RNA sequencing during wheat stem rust infection
Authors
- Nicholas A. Mueth
- Scot H. Hulbert
- Content type: Data Note
- Open Access
- Published: 14 August 2023
- Article: 171
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Whole genome sequence of Citrus yellow vein clearing virus CA1 isolate
Authors
- Yongduo Sun
- Raymond Yokomi
- Content type: Research Note
- Open Access
- Published: 10 August 2023
- Article: 166
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The probability distributions of the movement of dairy and beef cattle in Japan: a data note
Authors (first, second and last of 6)
- Yoshinori Murato
- Yoko Hayama
- Takehisa Yamamoto
- Content type: Data Note
- Open Access
- Published: 24 July 2023
- Article: 153
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Genomes to Fields 2022 Maize genotype by Environment Prediction Competition
Authors (first, second and last of 34)
- Dayane Cristina Lima
- Jacob D. Washburn
- Natalia de Leon
- Content type: Data Note
- Open Access
- Published: 17 July 2023
- Article: 148
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A chromosome scale assembly of the tarnished plant bug, Lygus lineolaris (Palisot de Beauvois), genome
Authors (first, second and last of 11)
- O. P. Perera
- Surya Saha
- Thomas Swale
- Content type: Research Note
- Open Access
- Published: 27 June 2023
- Article: 125
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Chloroplast markers for the Malvaceae and the plastome of Henderson’s checkermallow (Sidalcea hendersonii S.Wats.), a rare plant from the Pacific Northwest
Authors (first, second and last of 5)
- Diana M. Percy
- Sæmundur Sveinsson
- Quentin C.B. Cronk
- Content type: Research Note
- Open Access
- Published: 23 May 2023
- Article: 87
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First draft genome and transcriptome of Cercosporidium personatum, causal agent of late leaf spot disease of peanut
Authors (first, second and last of 8)
- Renee S. Arias
- John T. Dobbs
- Alicia N. Massa
- Content type: Research Note
- Open Access
- Published: 21 April 2023
- Article: 58
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Phylogenetic trees, conserved motifs and predicted subcellular localization for transcription factor families in pearl millet
Authors (first, second and last of 5)
- Yingwei Qu
- Ambika Dudhate
- Daisuke Tsugama
- Content type: Data Note
- Open Access
- Published: 20 March 2023
- Article: 38
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Transcriptome dataset from Solanum lycopersicum L. cv. Micro-Tom; wild type and two mutants of INDOLE-ACETIC-ACID (SlIAA9) using long-reads sequencing oxford nanopore technologies
Authors (first, second and last of 9)
- Wahyu Muhammad Yuha Lubis
- M Adrian
- Deden Derajat Matra
- Content type: Data Note
- Open Access
- Published: 20 March 2023
- Article: 40
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Chloroplast genome draft assembly of Falcataria moluccana using hybrid sequencing technology
Authors
- Vilda Puji Dini Anita
- Deden Derajat Matra
- Ulfah Juniarti Siregar
- Content type: Research Note
- Open Access
- Published: 09 March 2023
- Article: 31
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Population structure in diverse pepper (Capsicum spp.) accessions
Authors (first, second and last of 12)
- Jack McCoy
- Natalia MartÃnez-Ainsworth
- David Baumler
- Content type: Research Note
- Open Access
- Published: 25 February 2023
- Article: 20