Collection
Coronavirus collection
- Submission status
- Closed
As a service to the community, this first topical collection from Archives of Virology brings together seven published articles from 2020 that are relevant to SARS-CoV-2. Two of the articles reaffirm that variation in the sequences of both bovine and avian coronaviruses occur regularly and can affect pathogenicity (Abi, 2020, Ismail, 2020); one of the variations recorded in a bovine coroanvirus is the insertion of 12 nucleotides in the hemagglutinin-esterase gene near the receptor binding domain (Abi et al, 2020). A third manuscript showed that novel coronaviruses can appear in swine through the process of recombination (Park et al, 2020). Both insertion mutagenesis and recombination were and still are important processes in the evolution of SARS-CoV-2. A model for the mechanism of recombination in coronaviruses involving the stuttering of the polymerase based on palindromic sequences (Gallaher, 2020) attracted a great deal of attention. Finally, already in April 2020, Archives of Virology published a review on the emergence of SARS-CoV-2 (Gomes da Costa et al, 2020), discussed in the context of the emergence of SARS and MERS coronaviruses. This detailed review has been downloaded almost 10,000 times and already has over 60 citiations. The article provides an excellent introduction to the field and provides the background to understanding these pathogens that have plagued the world in this still relatively young century.
Articles (17 in this collection)
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Host adaptation of codon usage in SARS-CoV-2 from mammals indicates potential natural selection and viral fitness
Authors (first, second and last of 9)
- Yanan Fu
- Yanping Huang
- Long Liu
- Content type: Original Article
- Published: 27 September 2022
- Pages: 2677 - 2688
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Molecular analysis reveals a distinct subgenogroup of porcine epidemic diarrhea virus in northern Vietnam in 2018–2019
Authors (first, second and last of 7)
- Bui Thi Thuy Duong
- Pham Thi Phuong Thao
- Dong Van Quyen
- Content type: Brief Report
- Published: 29 August 2022
- Pages: 2337 - 2346
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Genetic characteristics of human coronavirus HKU1 in mainland China during 2018
Authors (first, second and last of 11)
- Xiangpeng Chen
- Yun Zhu
- Zhengde Xie
- Content type: Original Article
- Published: 16 July 2022
- Pages: 2173 - 2180
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Mechanisms of host type I interferon response modulation by the nucleocapsid proteins of alpha- and betacoronaviruses
Authors
- Priya Yelemali
- Lin Hao
- Qiang Liu
- Content type: Review
- Published: 28 June 2022
- Pages: 1925 - 1930
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COVID-19 exit strategy during vaccine implementation: a balance between social distancing and herd immunity
Authors (first, second and last of 7)
- Suhad Daher-Nashif
- Rania Al-Anany
- Mohamed M. Emara
- Content type: Review
- Open Access
- Published: 20 June 2022
- Pages: 1773 - 1783
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Study of the effect of intestinal immunity in neonatal piglets coinfected with porcine deltacoronavirus and porcine epidemic diarrhea virus
Authors (first, second and last of 6)
- Jixiang Liang
- Yang Li
- Wanpo Zhang
- Content type: Original Article
- Published: 04 June 2022
- Pages: 1649 - 1657
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A decontamination strategy for resolving SARS-CoV-2 amplicon contamination in a next-generation sequencing laboratory
Authors (first, second and last of 11)
- Peter Mwangi
- Milton Mogotsi
- Martin Nyaga
- Content type: Brief Report
- Open Access
- Published: 17 March 2022
- Pages: 1175 - 1179
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Evolution of the SARS-CoV-2 genome and emergence of variants of concern
Authors
- Iman Safari
- Elahe Elahi
- Content type: Review
- Published: 30 November 2021
- Pages: 293 - 305
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Stability of SARS-CoV-2 and other airborne viruses under different stress conditions
Authors (first, second and last of 6)
- Marcilio Jorge Fumagalli
- Carlos Fabiano Capato
- Luiz Tadeu Moraes Figueiredo
- Content type: Brief Report
- Published: 02 November 2021
- Pages: 183 - 187
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An emerging novel bovine coronavirus with a 4-amino-acid insertion in the receptor-binding domain of the hemagglutinin-esterase gene
Authors (first, second and last of 6)
- Keha-mo Abi
- Qi Zhang
- Cheng Tang
- Content type: Annotated Sequence Record
- Published: 06 October 2020
- Pages: 3011 - 3015
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Characterization of S1 gene sequence variations of attenuated QX-like and variant infectious bronchitis virus strains and the pathogenicity of the viruses in specific-pathogen-free chickens
Authors (first, second and last of 4)
- Mohd Iswadi Ismail
- Tan Sheau Wei
- Abdul Rahman Omar
- Content type: Original Article
- Published: 22 September 2020
- Pages: 2777 - 2788
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The association between the incidence of COVID-19 and the distance from the virus epicenter in Iran
Authors (first, second and last of 4)
- Maryam Dadar
- Yadolah Fakhri
- Youcef Shahali
- Content type: Original Article
- Published: 02 September 2020
- Pages: 2555 - 2560
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Emergence and evolution of novel G2b-like porcine epidemic diarrhea virus inter-subgroup G1b recombinants
Authors
- Jonghyun Park
- Changhee Lee
- Content type: Original Article
- Published: 08 August 2020
- Pages: 2471 - 2478
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A palindromic RNA sequence as a common breakpoint contributor to copy-choice recombination in SARS-COV-2
Authors
- William R. Gallaher
- Content type: Brief Report
- Published: 31 July 2020
- Pages: 2341 - 2348
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Gene expression pattern differences in primary human pulmonary epithelial cells infected with MERS-CoV or SARS-CoV-2
Authors
- Yunyueng Jang
- Sang Heui Seo
- Content type: Original Article
- Published: 10 July 2020
- Pages: 2205 - 2211
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The emergence of SARS, MERS and novel SARS-2 coronaviruses in the 21st century
Authors
- Vivaldo Gomes da Costa
- Marcos Lázaro Moreli
- Marielena Vogel Saivish
- Content type: Review
- Published: 22 April 2020
- Pages: 1517 - 1526