Abstract
Species of Trichoderma are used to control soilborne diseases as this versatile organism can adapt itself to varied ecological niche and utilize available nutrients. When it colonizes the plant root, entire microbial communities are altered, and the microbial community helps the plant by solubilizing the nutrients, secreting growth hormones, and preventing harmful effects of pathogens. Though all these effects were attributed to Trichoderma, recent metagenomic studies have revealed the complex multipartite interactions in the rhizosphere and inside host cell. Trichoderma species are now acknowledged as endophytes, and the mechanisms involved in suppressing the host defenses are documented.
The comparative genomics of Trichoderma species revealed the presence of genes in these mycoparasites to attack other pathogenic fungi and interact with plants. The advent of new-generation sequencing (NGS) techniques has opened new ways to analyze and find out the community pattern and functions in the soil rhizosphere. Most Trichoderma species function almost similar to the mycorrhiza. When a root is colonized by mycorrhiza, the microbial community changes around the rhizosphere, hence referred to as “mycorrhizosphere effect.” Similarly, metagenomics studies have found the microbial community changes in the rhizosphere of Trichoderma harzianum-applied roots leading to a “trichorhizosphere effect.” Multipartite interaction studies have shown the mechanisms of Trichoderma to maintain the plant metabolism and suppress the plant immunity for its own establishment. Genes mediating beneficial interactions with associated microbes can be manipulated to increase the efficiency of the rhizosphere by the gene editing techniques.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Alzubaidy H, Essack M, Malas TB, Bokhari A, Motwalli O, Kamanu FK, Jamhor SA, Mokhtar NA, Antunes A, Simoes MF, Alam I, Bougouffa S, Lafi FF, Bajic VB, Archer JAC (2016) Rhizosphere microbiome metagenomics of gray mangroves (Avicennia marina) in the Red Sea. Gene 576:626–636
Anandaraj M (2000) Diseases of black pepper. In: Ravindran PN (ed) Black pepper Piper nigrum, Medicinal and aromatic plants – industrial profiles. Harwood Academic Publishers, Amsterdam, pp 239–267
Anandaraj M, Sarma YR (1994) Effect of vesicular arbuscular mycorrhizae on rooting of black pepper (Piper nigrum L.). J Spices Arom Crops 3:39–42
Anandaraj M, Sarma YR (2003) The potential of PGPRs in disease management of Spice crop. In: 6th International PGPR workshop, 5–10 Oct 2003, Calicut, India
Anandaraj M, Umadevi P (2017) Multipartite interaction of introduced biocontrol agents in the rhizosphere. In: Fifth National conference on biological control: integrating recent advances in pest and disease management, ICAR-National Bureau of Agricultural Insect Resources, Bengaluru, India
Bailey BA, Strem MD, Wood D (2009) Trichoderma species form endophytic associations within Theobroma cacao trichomes. Mycol Res 113:1365–1376
Baroncelli R, Zapparata A, Piaggeschi G, Sarrocco S, Vannacci G (2016) Draft whole-genome sequence of Trichoderma gamsii T6085, a promising biocontrol agent of Fusarium head blight on wheat. Genome Announc 4(1):e01747–e01715
Calderon AA, Zapata JM, Munoz R, Pedreno MA, Barcelo AR (1993) Resveratrol production as a part of the hypersensitive-like response of grapevine cells to an elicitor from Trichoderma viride. New Phytol 124:455–463
Calvet C, Estaun V, Camprubi A (1992) Germination, early mycelia growth and infectivity of a vesicular-arbuscular mycorrhizal fungus in organic substrates. Symbiosis 14:405–411
Camprubi A, Calvet C, Estaun V (1995) Growth enhancement of Citrus reshni after inoculation with Glomus intraradices and Trichoderma aureoviridae and associated effects on microbial population and enzyme activity in potting mixer. Plant Soil 173:233–238
Castañeda LE, Barbosa O (2016) Metagenomic analysis exploring taxonomic and functional diversity of soil microbial communities in Chilean vineyards and surrounding native forests. Peer J 5:e3098. https://doi.org/10.7717/peerj.3098
Chacon MR, Rodriguez-Galan O, Benitez T, D’Sousa S, Benitez T, Sousa S, Rey M, Llobell A, Delgado-Jarana J (2007) Microscopic and transcriptome analyses of early colonization of tomato roots by Trichoderma harzianum. Int Microbiol 10:19–27
Chem M, Fitzgerald HA, Canlas PE, Navarre DA, Ronald PC (2005) Over expression of a rice NPR1 homolog leads to constitutive activation of defense response and hypersensitivity to light. Mol Plant Microbe Interact 18:511–520
Dave N, Prajapati K, Patel A, Patel Z, Nandini D, Bariya H (2013) Trichoderma harzianum elicits defense response in Brassica juncea plantlets. Int Res J Biol Sci 2(11):1–10
De Jaeger N, Declerck S, de la Providencia IV (2010) Mycoparasitism of arbuscular mycorrhizal fungi: a pathway for the entry of saprotrophic fungi into roots. FEMS Microbiol Ecol 73:312–322
De Jaeger N, de la Providencia I, Dupre de Boulois H, Declerck S (2011) Trichoderma harzianum might impact phosphorus transport by arbuscular mycorrhizal fungi. FEMS Microbiol Ecol 77:558–567
De Souza JT, Bailey BA, Pomella AWV, Erbe EF, Murphy CA, Bae H, Hebbar KP (2008) Colonization of cacao seedlings by Trichoderma stromaticum a mycoparasite of the witches’ broom pathogen, and its influence on plant growth and resistance. Biol Control 46:36–45
Djonovic S, Pozo MJ, Dangott LJ, Howell CR, Kenerley CM (2006) Sm1, a proteinaceous elicitor secreted by the biocontrol fungus Trichoderma virens induces plant defense responses and systemic resistance. Mol Plant Microbe Interact 19:838–853
Dong X (2001) Genetic dissection of systemic acquired resistance. Curr Opin Plant Biol 4(4):309–314
Dong X (2004) NPR1, all things considered. Curr Opin Plant Biol 7(5):547–552
Glazebrook J, Chen WJ, Estes B, Chang HS, Nawrath C, Metraux JP, Zhu T, Katagiri F (2003) Topology of the network integrating salicylate and jasmonate signal transduction derived from global expression phenotyping. Plant J 34:217–228
Green H, Larsen J, Olsson PA, Jensen DF, Jakobsen I (1999) Suppression of the biocontrol agent Trichoderma harzianum by mycelium of the arbuscular mycorrhizal fungus Glomus intraradices in root-free soil. Appl Environ Microbiol 65:1428–1413
Hanson LE, Howell CR (2004) Elicitors of plant defense responses from biocontrol strains of Trichoderma virens. Phytopathology 94:171–176
Harman GE (2000) Myths and dogmas of biocontrol: changes in perception derived from research on Trichoderma harzianum T-22. Plant Dis 84:377–393
Harman GE, Howell CR, Viterbo A, Chet I, Lorito M (2004) Trichoderma species-opportunistic, avirulent plant symbionts. Nat Rev Microbiol 2:43–56
Hartmann A, Rotballer M, Schimid M (2008) Loenz Hiltner, a pioneer in rhizosphere microbial ecology and soil bacteriology research. Plant Soil 312:7–14
Howell CR, Hanson LE, Stipanovic RD, Puckhaber LS (2000) Induction of terpenoid synthesis in cotton roots and control of Rhizoctonia solani by seed treatment with Trichoderma virens. Phytopathology 90:248–252
Kubicek CP, Herrera-Estrella A, Seidl-Seiboth V et al (2011) Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma. Genome Biol 12:R40. https://doi.org/10.1186/gb-2011-12-4-r40
Linderman RG (1998) Mycorrhizal interactions with the rhizosphere microflora: the mycorrhizosphere effect. Phytopathology 78:366–371
Lorito M, Woo SL, Harman GE, Monte E (2010) Translational research on Trichoderma: from ’Omics to the field. Annu Rev Phytopathol 48:395–417
Martinez A, Obertello M, Pardo A, Ocampo JA, Godeas A (2004) Interactions between Trichoderma pseudokoningii strains and the arbuscular mycorrhizal fungi Glomus mosseae and Gigaspora rosea. Mycorrhiza 14:79–84
Martinez D, Berka RM, Henrissat B, Saloheimo M, Arvas M, Baker SE (2008) Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina). Nat Biotechnol 26(5):553–560
Meyer F, Parman D, D’Souza M et al (2008) The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes. BMC Bioinformatics 9. https://doi.org/10.1186/1471-2105-9-386
Mukherjee PK, Horwitz BA, Kenerley CM (2012) Secondary metabolism in Trichoderma–a genomic perspective. Microbiology 158:35–45
Mukhopadhyay AN (1987) Biological control of soil-borne plant pathogens by Trichoderma spp. Indian J Mycol Plant Pathol 17:1–10
Navazio L, Baldan B, Moscatiello R, Zuppini A, Woo SL, Mariani P, Lorito M (2007) Calcium-mediated perception and defense responses activated in plant cells by metabolite mixtures secreted by the biocontrol fungus Trichoderma atroviride. BMC Plant Biol 7:41. https://doi.org/10.1186/1471-2229-7-41
Palmieri MC, Perazzolli M, Matafora V, Moretto M, Bachi A, Pertot I (2012) Proteomic analysis of grapevine resistance induced by Trichoderma harzianum T39 reveals specific defence pathways activated against downy mildew. J Exp Bot 63:6237–6251
Papavizas GC (1985) Trichoderma and Gliocladium: biology, ecology and potential for biocontrol. Annu Rev Phytopathol 23:23–54
Puranik S, Pal RR, More RP, Purohit HJ (2016) Metagenomic approach to characterize soil microbial diversity of Phumdi at Loktak Lake. Water Sci Technol 74(9):2075–2086
Rajan PP, Sarma YR, Anandaraj M (2002) Management of foot rot disease of black pepper with Trichoderma spp. Indian Phytopathol 55:34–38
Shoresh M, Harman GE (2008a) The relationship between increased growth and resistance induced in plants by root colonizing microbes. Plant Signal Behav 3:737–739
Shoresh M, Harman GE (2008b) The molecular basis of shoot responses of maize seedlings to Trichoderma harzianum T22 inoculation of the root: a proteomic approach. Plant Physiol 147:2147–2163
Shoresh M, Yedidia I, Chet I (2005) Involvement of jasmonic acid/ethylene signaling pathway in the systemic resistance induced in cucumber by Trichoderma asperellum T203. Phytopathology 95:76–84
Shoresh M, Gal-On A, Leibman D, Chet I (2006) Characterization of a mitogen-activated protein kinase gene from cucumber required for Trichoderma-conferred plant resistance. Plant Physiol 142:1169–1179
Sibi MC (2013) Development of biocontrol consortia for tissue cultured black pepper (Piper nigrum L.,) plants. Dissertation, Mangalore University
Simoes MF, Antunes A, Cristiane A, Ottoni CA, Amini MS, Alam I, Alzubaidy H, Mokhtar N, John AC, Archer JAC, Bajic VB (2015) Soil and rhizosphere associated fungi in gray mangroves (Avicennia marina) from the Red Sea - a metagenomic approach. Genom Proteom Bioinf 13:310–320
Srivastava M, Shahid M, Pandey S, Singh A, Kumar V, Gupta S, Maurya M (2014) Trichoderma genome to genomics: a review. Data Mining Genom Proteom 5:3. https://doi.org/10.4172/2153-0602.1000162
Ton J, Van Pelt JA, Van Loon LC, Pieterse CMJ (2002) Differential effectiveness of salicylate-dependent and jasmonate/ethylene-dependent induced resistance in Arabidopsis. Mol Plant Microbe Interact 15:27–34
Umadevi P (2018) Microbial community dynamics and modulation of defense responses in black pepper by Trichoderma harzianum. Dissertation, University of Calicut
Umadevi P, Anandaraj M (2019) Proteomics analysis of the tripartite interaction between black pepper, Trichoderma harzianum and Phytophthora capsici provides insights into induced systemic resistance mediated by Trichoderma spp. Eur J Plant Pathol 154:1–14
Umadevi P, Anandaraj M, Benjamin S (2017) Endophytic interactions of Trichoderma harzianum in a tropical perennial rhizo – ecosystem. Res J Biotechnol 12(3):22–30
Umadevi P, Anandaraj M, Srivastav V, Benjamin S (2018) Trichoderma harzianum MTCC 5179 impacts the population and functional dynamics of microbial community in the rhizosphere of black pepper (Piper nigrum L.). Braz J Microbiol 49(3):463–470
Van Loon LC, Bakker PA, Pieterse CM (1998) Systemic resistance induced by rhizosphere bacteria. Annu Rev Phytopathol 36:453–483
Viterbo A, Harel M, Horwitz BA, Che I, Mukherjee PK (2005) Trichoderma mitogen-activated protein kinase signaling is involved in induction of plant systemic resistance. Appl Environ Microbiol 71:6241–6246
Xu Z, Hansen MA, Hansen LH, Jacquiod S, Sorensen SJ (2014) Bioinformatic approaches reveal metagenomic characterization of soil microbial community. PLoS One 9:e93445. https://doi.org/10.1371/journal.pone.0093445
Yedidia I, Benhamou N, Chet I (1999) Induction of defense responses in cucumber plants (Cucumis sativus L.) by the biocontrol agent Trichoderma harzianum. Appl Environ Microbiol 65:1061–1070
Yedidia I, Shoresh M, Kerem Z, Ben-hamou N, Kapulnik Y, Chet I (2003) Concomitant induction of systemic resistance to Pseudomonas syringae pv. Lachrymans in cucumber by Trichoderma asperellum (T-203) and accumulation of phytoalexins. Appl Environ Microbiol 69:7343–7353
Author information
Authors and Affiliations
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2020 Springer Nature Singapore Pte Ltd.
About this chapter
Cite this chapter
Anandaraj, M., Umadevi, P. (2020). Multipartite Interaction of Trichoderma harzianum (MTCC 5179) as Endophyte and a Growth Promoter of Black Pepper (Piper nigrum L.). In: Sharma, A., Sharma, P. (eds) Trichoderma. Rhizosphere Biology. Springer, Singapore. https://doi.org/10.1007/978-981-15-3321-1_13
Download citation
DOI: https://doi.org/10.1007/978-981-15-3321-1_13
Published:
Publisher Name: Springer, Singapore
Print ISBN: 978-981-15-3320-4
Online ISBN: 978-981-15-3321-1
eBook Packages: Biomedical and Life SciencesBiomedical and Life Sciences (R0)