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References
Demchenko AP (2009) Introduction to fluorescence sensing. Springer, Amsterdam
McFarland SA, Finney NS (2001) Fluorescent chemosensors based on conformational restriction of a biaryl fluorophore. J Am Chem Soc 123:1260–1261
de Silva AP, Fox DB, Moody TS, Weir SM (2001) The development of molecular fluorescent switches. Trends Biotechnol 19:29–34
Marme N, Knemeyer JP, Sauer M, Wolfrum J (2003) Inter- and intramolecular fluorescence quenching of organic dyes by tryptophan. Bioconjug Chem 14:1133–1139
Lebold TP, Yeow EK, Steer RP (2004) Fluorescence quenching of the S1 and S2 states of zinc meso-tetrakis(4-sulfonatophenyl)porphyrin by halide ions. Photochem Photobiol Sci 3:160–166
Chen YG, Zhao D, He ZK, Ai XP (2007) Fluorescence quenching of water-soluble conjugated polymer by metal cations and its application in sensor. Spectrochim Acta A Mol Biomol Spectrosc 66:448–452
Ellison EH, Moodley D, Hime J (2006) Fluorescence study of arene probe microenvironment in the intraparticle void volume of zeolites interfaced with bathing polar solvents. J Phys Chem B 110:4772–4781
de Silva AP, Gunaratne HQN, Gunnaugsson T, Huxley AJM, McRoy CP, Rademacher JT, Rice TE (1997) Signaling recognition events with fluorescent sensors and switches. Chem Rev 97:1515–1566
Demchenko AP (2005) Optimization of fluorescence response in the design of molecular biosensors. Anal Biochem 343:1–22
Descalzo AB, Zhu S, Fischer T, Rurack K (2010) Optimization of the coupling of target recognition and signal generation. In: Demchenko AP (ed) Advanced Fluorescence Reporters in Chemistry and Biology II. Springer Ser Fluoresc 9:41–105
Vogt RFJ, Marti GE, Zenger V (2008) Quantitative fluorescence calibration: a tool for assessing the quality of data obtained by fluorescence measurements. In: Resch-Genger U (ed) Standardization and quality assurance in fluorescence measurements I: Springer Ser Fluoresc 5:3–31
Demchenko AP (2005) The problem of self-calibration of fluorescence signal in microscale sensor systems. Lab Chip 5:1210–1223
Schaferling M, Duerkop A (2008) Intrinsically referenced fluorimetric sensing and detection schemes: methods, advantages and applications. In: Resch-Genger U (ed) Standardization and quality assurance in fluorescence measurements I: Springer Ser Fluoresc 5:373–414
Jameson DM, Croney JC (2003) Fluorescence polarization: past, present and future. Comb Chem High Throughput Screen 6:167–173
Guo XQ, Castellano FN, Li L, Lakowicz JR (1998) Use of a long lifetime Re(I) complex in fluorescence polarization immunoassays of high-molecular weight analytes. Anal Chem 70:632–637
Lakowicz JR (2007) Principles of fluorescence spectroscopy, 3rd edn. Springer, New York
Maliwal BP, Gryczynski Z, Lakowicz JR (2001) Long-wavelength long-lifetime luminophores. Anal Chem 73:4277–4285
Lakowicz JR (1999) Principles of fluorescence spectroscopy. Kluwer Academic, New York
Liebsch G, Klimant I, Krause C, Wolfbeis OS (2001) Fluorescent imaging of pH with optical sensors using time domain dual lifetime referencing. Anal Chem 73:4354–4363
Borisov SM, Neurauter G, Schroeder C, Klimant I, Wolfbeis OS (2006) Modified dual lifetime referencing method for simultaneous optical determination and sensing of two analytes. Appl Spectrosc 60:1167–1173
Yang CJ, Jockusch S, Vicens M, Turro NJ, Tan W (2005) Light-switching excimer probes for rapid protein monitoring in complex biological fluids. Proc Natl Acad Sci USA 102:17278–17283
Yang RH, Chan WH, Lee AWM, Xia PF, Zhang HK, Li KA (2003) A ratiometric fluorescent sensor for Ag-1 with high selectivity and sensitivity. J Am Chem Soc 125:2884–2885
Clegg RM (1996) Fluorescence resonance energy transfer. In: Wang XF, Herman B (eds) Fluorescence imaging spectroscopy and microscopy. John Wiley, New York, pp 179–252
Selvin PR (2000) The renaissance of fluorescence resonance energy transfer. Nat Struct Biol 7:730–734
Tahtaoui C, Guillier F, Klotz P, Galzi JL, Hibert M, Ilien B (2005) On the use of nonfluorescent dye labeled ligands in FRET-based receptor binding studies. J Med Chem 48:7847–7859
Tyagi S, Kramer FR (1996) Molecular beacons: probes that fluoresce upon hybridization. Nat Biotechnol 14:303–308
Hildebrandt N, Charbonniere LJ, Lohmannsroben HG (2007) Time-resolved analysis of a highly sensitive forster resonance energy transfer immunoassay using terbium complexes as donors and quantum dots as acceptors. J Biomed Biotechnol 2007:79169
Wu PG, Brand L (1994) Resonance energy-transfer - methods and applications. Anal Biochem 218:1–13
Petitjean A, Lehn JM (2007) Conformational switching of the pyridine-pyrimidine-pyridine scaffold for ion-controlled FRET. Inorganica Chim Acta 360:849–856
Gershkovich AA, Kholodovych VV (1996) Fluorogenic substrates for proteases based on intramolecular fluorescence energy transfer (IFETS). J Biochem Biophys Methods 33:135–162
Xu H, Wu HP, Huang F, Song SP, Li WX, Cao Y, Fan CH (2005) Magnetically assisted DNA assays: high selectivity using conjugated polymers for amplified fluorescent transduction. Nucleic Acids Res 33:e83
Johansson MK, Cook RM (2003) Intramolecular dimers: a new design strategy for fluorescence-quenched probes. Chemistry 9:3466–3471
Tramier M, Coppey-Moisan M (2008) Fluorescence anisotropy imaging microscopy for homo-FRET in living cells. Methods Cell Biol 85:395–414
Jares-Erijman EA, Jovin TM (2003) FRET imaging. Nat Biotechnol 21:1387–1395
Takakusa H, Kikuchi K, Urano Y, Kojima H, Nagano T (2003) A novel design method of ratiometric fluorescent probes based on fluorescence resonance energy transfer switching by spectral overlap integral. Chemistry 9:1479–1485
Giordano L, Jovin TM, Irie M, Jares-Erijman EA (2002) Diheteroarylethenes as thermally stable photoswitchable acceptors in photochromic fluorescence resonance energy transfer (pcFRET). J Am Chem Soc 124:7481–7489
Selvin PR (2002) Principles and biophysical applications of lanthanide-based probes. Annu Rev Biophys Biomol Struct 31:275–302
Algar WR, Krull UJ (2008) Quantum dots as donors in fluorescence resonance energy transfer for the bioanalysis of nucleic acids, proteins, and other biological molecules. Anal Bioanal Chem 391:1609–1618
Medintz IL, Mattoussi H (2009) Quantum dot-based resonance energy transfer and its growing application in biology. Phys Chem Chem Phys 11:17–45
Resch-Genger U, Grabolle M, Nitschke R, Nann T (2010) Nanocrystals and nanoparticles vs. molecular fluorescent labels as reporters for bioanalysis and the life sciences. A critical comparison. In: Demchenko AP (ed) Advanced Fluorescence Reporters in Chemistry and Biology II. Springer Ser Fluoresc 9:3–40
Charbonniere LJ, Hildebrandt N, Ziessel RF, Lohmannsroben HG (2006) Lanthanides to quantum dots resonance energy transfer in time-resolved fluoro-immunoassays and luminescence microscopy. J Am Chem Soc 128:12800–12809
Demchenko AP (2005) The future of fluorescence sensor arrays. Trends Biotechnol 23:456–460
Clarke RJ, Zouni A, Holzwarth JF (1995) Voltage sensitivity of the fluorescent probe RH421 in a model membrane system. Biophys J 68:1406–1415
Callis PR (2010) Electrochromism and solvatochromism in fluorescence response of organic dyes. A nanoscopic view. In: Demchenko AP (ed) Advanced Fluorescence Reporters in Chemistry and Biology I. Springer Ser Fluoresc 8:309–330
Grynkiewicz G, Poenie M, Tsien RY (1985) A new generation of Ca2+ indicators with greatly improved fluorescence properties. J Biol Chem 260:3440–3450
Chang CJ, Javorski J, Nolan EM, Shaeng M, Lippard SJ (2004) A tautomeric zinc sensor for ratiometric fluorescence imaging: application to nitric oxide-release of intracellular zinc. Proc Natl Acad Sci USA 101:1129–1134
Arnaut LG, Formosinho SJ (1993) Excited-state proton-transfer reactions. 1. Fundamentals and intermolecular reactions. J Photochem Photobiol A Chem 75:1–20
Davenport LD, Knutson JR, Brand L (1986) Excited-state proton transfer of equilenin and dihydro equilenin: inreractions with bilayer vesicles. Biochemistry 25:1186–1195
Formosinho SJ, Arnaut LG (1993) Excited-state proton-transfer reactions. 2. Intramolecular reactions. J Photochem Photobiol A Chem 75:21–48
Hsieh C-C, Ho M-L, Chou P-T (2010) Organic dyes with excited-state transforma-tions (electron, charge and proton transfers). In: Demchenko AP (ed) Advanced Fluorescence Reporters in Chemistry and Biology I. Springer Ser Fluoresc 8:225–266
Shynkar VV, Klymchenko AS, Piemont E, Demchenko AP, Mely Y (2004) Dynamics of intermolecular hydrogen bonds in the excited states of 4′-dialkylamino-3-hydroxyflavones. On the pathway to an ideal fluorescent hydrogen bonding sensor. J Phys Chem A 108:8151–8159
Strandjord AJG, Barbara PF (1985) Proton-transfer kinetics of 3-Hydroxyflavone – solvent effects. J Phys Chem 89:2355–2361
Yushchenko DA, Shvadchak VV, Bilokin MD, Klymchenko AS, Duportail G, Mely Y, Pivovarenko VG (2006) Modulation of dual fluorescence in a 3-hydroxyquinolone dye by perturbation of its intramolecular proton transfer with solvent polarity and basicity. Photochem Photobiol Sci 5:1038–1044
Tomin VI, Oncul S, Smolarczyk G, Demchenko AP (2007) Dynamic quenching as a simple test for the mechanism of excited-state reaction. Chem Phys 342:126–134
Altschuh D, Oncul S, Demchenko AP (2006) Fluorescence sensing of intermolecular interactions and development of direct molecular biosensors. J Mol Recognit 19:459–477
Oncul S, Demchenko AP (2006) The effects of thermal quenching on the excited-state intramolecular proton transfer reaction in 3-hydroxyflavones. Spectrochim Acta A Mol Biomol Spectrosc 65:179–183
Valeur B (2002) Molecular fluorescence. Wiley VCH, Weinheim
Tomin VI (2010) Physical principles behind spectroscopic response of organic fluorophores to intermolecular interactions. In: Demchenko AP (ed) Advanced Fluorescence Reporters in Chemistry and Biology I. Springer Ser Fluoresc 8:189–224
Vazquez ME, Blanco JB, Imperiali B (2005) Photophysics and biological applications of the environment-sensitive fluorophore 6-N, N-Dimethylamino-2, 3-naphthalimide. J Am Chem Soc 127:1300–1306
Grabowski ZR, Rotkiewicz K, Rettig W (2003) Structural changes accompanying intramolecular electron transfer: Focus on twisted intramolecular charge-transfer states and structures. Chem Rev 103:3899–4031
Klymchenko AS, Demchenko AP (2003) Multiparametric probing of intermolecular interactions with fluorescent dye exhibiting excited state intramolecular proton transfer. Phys Chem Chem Phys 5:461–468
Caarls W, Celej MS, Demchenko AP, Jovin TM (2009) Characterization of coupled ground state and excited state equilibria by fluorescence spectral deconvolution. J Fluorescence 20:181–190
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Demchenko, A.P. (2010). Comparative Analysis of Fluorescence Reporter Signals Based on Intensity, Anisotropy, Time-Resolution, and Wavelength-Ratiometry. In: Demchenko, A. (eds) Advanced Fluorescence Reporters in Chemistry and Biology I. Springer Series on Fluorescence, vol 8. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-04702-2_1
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