Abstract
Shuangancistrotectorines A, B, C, D and E are naphthylisoquinoline alkaloids isolated from the twigs of Ancistrocladus tectorius, an indigenous plant in China and South East Asia. Their molecules are all C2-symmetric, i.e., they consist of two identical units. Each unit contains a naphthalene moiety and an isoquinoline moiety. Shuangancistrotectorine B and E are atropo-diastereomers of shuangancistrotectorine A and D respectively. Shuangancistrotectorine A, B and D exhibit very good and specific antimalarial activity, with shuangancistrotectorine A being the most active. The current work presents the results of a detailed conformational study of shuangancistrotectorine A, performed in vacuo and in three solvents with different polarities and different H-bonding abilities (chloroform, acetonitrile and water), using two levels of theory, HF/6-31G(d,p) and DFT/B3LYP/6-31+G(d,p). Particular attention is given to intramolecular hydrogen bonds’ patterns. The results show that intramolecular hydrogen bonds are the dominant factor influencing conformational preferences and energies, and also the other computable molecular properties. The mutual orientation of the moieties is also an energy-influencing factor, and the results show that all the moieties prefer to be perpendicular to each other. Comparisons with the results of other previously-investigated dimeric naphthylisoquinoline alkaloids are also included.
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References
WHO 018 https://apps.who.int/iris/bitstream/handle/10665/275867/9789241565653-eng.pdf?ua=1
Xu M, Bruhn T, Hertlein B, Brun R, Stich A, Wu J, Bringmann G (2010) Chem Eur J 16:4206–4216
Mammino L, Bilonda MK (2016) Theor Chem Acc 135:101. https://doi.org/10.1007/s00214-016-1843-7
Bilonda MK, Mammino L (2018) In: Wang Y, Thachuk M, Krems R, Maruani J (eds) Concepts, methods and applications of quantum systems in chemistry and physics. Springer, Berlin, pp 305–328
Mammino L, Bilonda MK (2017) In: Tadjer A, Pavlov R, Maruani J, Brändas EJ, Delgado-Barrio G (eds) Quantum systems in physics, chemistry, and biology—advances in concepts and applications, Springer, pp 303–316
Bilonda MK, Mammino L (2018) Theor Chem Acc 137:139. https://doi.org/10.1007/s00214-018-2323-z
Bringmann G, Zhang G, Büttner T, Bauckmann G, Kupfer T, Braunschweig H, Brun R, Mudogo V (2013) Chem Eur J 19:916–923
Boyd MR (1994) J Med Chem 37:1740–1745
Becke AD (1993) J Chem Phys 98:5648–5662
Lee C, Yang W, Parr RG (1988) Phys Rev B 37:785–789
Mammino L, Kabanda MM (2009) J Mol Struct (Theochem) 901:210–219
Mammino L, Kabanda MM (2012) Int J Quantum Chem 112:2650–2658
Irikura K, Johnson RD III, Kacker RN (2005) J Phys Chem A 109:8430–8437
Barone V, Cossi M (1997) J Chem Phys 107:3210–3221
Tomasi J, Mennucci B, Cammi R (2005) Chem Rev 105:2999–3093
Barone V, Cossi M, Tomasi J (1998) J Comput Chem 19:404–417
Cossi M, Scalmani G, Rega N, Barone V (2002) J Chem Phys 117:43–54
Cancès E, Mennucci B, Tomasi J (1997) J Chem Phys 107:3032–3041
Tomasi J, Mennucci B, Cancès E, (1999) (Theochem) 464:211–226
Frisch MJ, Trucks GW, Schlegel HB, Scuseria GE, Robb MA, Cheeseman JR, Montgomery JA, Vreven T, Kudin KN, Burant JC, Millam JM, Iyengar SS, Tomasi J, Barone V, Mennucci B, Cossi M, Scalmani G, Rega N, Petersson GA, Nakatsuji H, Hada M, Ehara M, Toyota K, Fukuda R, Hasegawa J, Ishida M, Nakajima T, Honda Y, Kitao O, Nakai H, Klene M, Li X, Knox JE, Hratchian HP, Cross JB, Adamo C, Jaramillo J, Gomperts R, Stratmann RE, Yazyev O, Austin AJ, Cammi R, Pomelli C, Ochterski JW, Ayala PY, Morokuma K, Voth GA, Salvador P, Dannenberg JJ, Zakrzewski VG, Dapprich S, Daniels AD, Strain MC, Farkas O, Malick DK, Rabuck AD, Raghavachari K, Foresman JB, Ortiz JV, Cui Q, Baboul AG, Clifford S, Cioslowski J, Stefanov BB, Liu G, Liashenko A, Piskorz P, Komaromi I, Martin RL, Fox DJ, Keith T, Al-Laham MA, Peng CY, Nanayakkara A, Challacombe M, Gill PMW, Johnson B, Chen W, Wong MW, Gonzalez C, Pople JA (2003) Gaussian 03. Gaussian Inc, Pittsburgh
Pascual-Ahuir JL, Silla E (1990) J Comput Chem 11:1047–1047
Silla E, Villar F, Nilsson O, Pascual-Ahuir JL, Tapia O (1990) J Mol Graph 8:168–172
Silla E, Tunon I, Pascual-Ahuir JL (1991) J Comput Chem 12:1077–1088
Frisch MJ, Trucks GW, Schlegel HB, Scuseria GE, Robb MA, Cheeseman JR, Scalmani G, Barone V, Mennucci B, Petersson GA, Nakatsuji H, Caricato M, Li X, Hratchian HP, Izmaylov AF, Bloino J, Zheng G, Sonnenberg JL, Hada M, Ehara M, Toyota K, Fukuda R, Hasegawa J, Ishida M, Nakajima T, Honda Y, Kitao O, Nakai H, Vreven T, Montgomery JA, Jr, Peralta JE, Ogliaro F, Bearpark M, Heyd JJ, Brothers E, Kudin KN, Staroverov VN, Keith T, Kobayashi R, Normand J, Raghavachari K, Rendell A, Burant JC, Iyengar SS, Tomasi J, Cossi M, Rega N, Millam JM, Klene M, Knox JE, Cross JB, Bakken V, Adamo C, Jaramillo J, Gomperts R, Stratmann RE, Yazyev O, Austin AJ, Cammi R, Pomelli C, Ochterski JW, Martin RL, Morokuma K, Zakrzewski VG, Voth GA, Salvador P, Dannenberg JJ, Dapprich S, Daniels AD, Farkas O, Foresman JB, Ortiz JV, Cioslowski J, Fox DJ, Gaussian (2013), Gaussian 09, Revision E.01, Inc., Wallingford CT
Buemi G, Zuccarello F (2002) J Mol Struct (Theochem) 581:71–85
Simperler A, Lampert H, Mikenda W (1998) J Mol Struct 448:191–199
Gilli G, Bellucci F, Ferretti V, Bertolasi V (1989) J Am Chem Soc 111:1023–1028
Bertolasi V, Gilli P, Ferretti V, Gilli G (1991) J Am Chem Soc 113:4017–4925
Gilli P, Bertolasi V, Ferretti V, Gilli G (1994) J Am Chem Soc 116:909–915
Nolasco MM, Ribeiro-Claro PJA (2005) Chem Phys Chem 6:496–502
Buemi G (2002) Chem Phys 282:181–195
Posokhov Y, Gorski A, Spanget-Larsen J, Duus F, Hansen PE, Waluk (2004) J Chem Phys Chem 5:495–502
Sobczyk L, Grabowski SJ, Krygowski TM (2005) Chem Rev 105:3513–3560
Jablonski M, Kaczmarek A, Sadlej AJ (2006) J Phys Chem A 110:10890–10898
Schalley CA (2009) A. Springer, Mass spectrometry and gas-phase chemistry of non-covalent complexes. Wiley, Hoboken (NJ), p 17
Mammino L (2017) Molecules 22:1294. https://doi.org/10.3390/molecules22081294
Gu Q, Trindle C, Knee JL (2012) J Chem Phys 137:091101
Dasa M, Ghoshb SK (2017) J Chem Sci 129(7):975–981
Chem3D Ultra Version 8.0.3., ChemOffice, Cambridge Software (2003)
Nishiyama Y, Langan P, Chanzy H (2002) J Am Chem Soc 124:9074–9082
López de la Paz M, Ellis G, Pérez M, Perkins J, Jiménez-Barbero J, Vicent C (2002) Eur J Org Chem 5:840–855
Deshmukh MM, Bartolotti LJ, Gadre SR (2008) J Chem Phys. A 112:312–321
Parra RD, Gong B, Zeng XC (2001) J Chem Phys 115(13):6036–6041
Xing B, Yu CW, Chow KH, Ho PL, Fu D, Xu B (2002) J Am Chem Soc 124:14846–14847
Bushelyev SN, Stepanov NF (1989) Elektronnaya Struktura y Biologhicheskaya Aktivnost Molecul. Khimiya, Snaye, Moscow
Acknowledgements
The authors would like to thank the Centre for High Performance Computing (South Africa) for providing computational resources used to conduct this work. M. K. Bilonda is grateful to the National Research Foundation (NRF) of South Africa for a bursary to support her PhD studies.
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Bilonda, M.K., Mammino, L. (2020). Computational Study of Shuangancistrotectorine A: A Naphthylisoquinoline Alkaloid with Antimalarial Activity. In: Mammino, L., Ceresoli, D., Maruani, J., Brändas, E. (eds) Advances in Quantum Systems in Chemistry, Physics, and Biology. QSCP 2018. Progress in Theoretical Chemistry and Physics, vol 32. Springer, Cham. https://doi.org/10.1007/978-3-030-34941-7_10
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