Abstract
In this paper we present a novel statistical shape model for the liver based on a cubic Hermite mesh. With a small number of nodes (4, 12 or 20 for 1, 2 and 4 parametric cubic Hermite elements respectively) the complex liver shape can be captured with details. Such a model evolves from a generic ellipsoid-shaped template to fit to the data clouds of liver surfaces segmented from CT images. No landmarks on the data cloud are required to instruct the deformation of the parametric mesh. Through a Principle Component Analysis (PCA) for the nodal distribution on liver surfaces, a statistical shape model for the liver is generated. We found that 6 modes of the statistical model could interpret 96% of liver shape variations in 15 subject-specific livers. To evaluate the quality of node correspondence we devised a curvature criterion so that mis-alignments of nodes could be detected. In summary, a novel cubic Hermite mesh based statistical shape model is proposed. The mesh has a small set of nodes for PCA analysis, and the nodal correspondence across the shape database can be evaluated from a curvature criterion.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Heimann, T., Wolf, I., Meinzer, H.-P.: Active shape models for a fully automated 3D segmentation of the liver – an evaluation on clinical data. In: Larsen, R., Nielsen, M., Sporring, J. (eds.) MICCAI 2006. LNCS, vol. 4191, pp. 41–48. Springer, Heidelberg (2006). https://doi.org/10.1007/11866763_6
Saito, A., Yamamoto, S., Nawano, S., Shimizu, A.: Automated liver segmentation from a postmortem CT scan based on a statistical shape model. Int. J. Comput. Assist. Radiol. Surg. 12(2), 205–221 (2017)
Cootes, T.F., Taylor, C.J., Cooper, D.H., Graham, J.: Active shape models-their training and application. Comput. Vis. Image Underst. 61(1), 38–59 (1995)
Tsagaan, B., Shimizu, A., Kobatake, H., Miyakawa, K.: An automated segmentation method of kidney using statistical information. In: Dohi, T., Kikinis, R. (eds.) MICCAI 2002. LNCS, vol. 2488, pp. 556–563. Springer, Heidelberg (2002). https://doi.org/10.1007/3-540-45786-0_69
Shimizu, A., Ohno, R., Ikegami, T., Kobatake, H., Nawano, S., Smutek, D.: Segmentation of multiple organs in non-contrast 3D abdominal CT images. Int. J. Comput. Assist. Radiol. Surg. 2(3–4), 135–142 (2007)
Bradley, C., Pullan, A., Hunter, P.: Geometric modeling of the human torso using cubic hermite elements. Ann. Biomed. Eng. 25(1), 96–111 (1997)
Abbena, E., Salamon, S., Gray, A.: Modern Differential Geometry of Curves and Surfaces with Mathematica, 3rd edn. CRC Press, Boca Raton (2017)
Fernandez, J.W., Mithraratne, P., Thrupp, S.F., Tawhai, M.H., Hunter, P.J.: Anatomically based geometric modelling of the musculo-skeletal system and other organs. Biomech. Model. Mechanobiol. 2(3), 139–155 (2004)
Rueckert, D., Sonoda, L.I., Hayes, C., Hill, D.L.G., Leach, M.O., Hawkes, D.J.: Nonrigid registration using free-form deformations: application to breast MR images. IEEE Trans. Med. Imaging 18(8), 712–721 (1999)
Acknowledgments
We acknowledge the support of a Catalyst seed grant (Project number 3711560) from the Royal Society of New Zealand.
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2018 Springer Nature Switzerland AG
About this paper
Cite this paper
Yu, H.B., Nakagawa, Y., Ho, H., Saito, A., Shimizu, A. (2018). Deformable Cubic Hermite Mesh Templates for Statistical Liver Shape Analysis. In: Reuter, M., Wachinger, C., Lombaert, H., Paniagua, B., Lüthi, M., Egger, B. (eds) Shape in Medical Imaging. ShapeMI 2018. Lecture Notes in Computer Science(), vol 11167. Springer, Cham. https://doi.org/10.1007/978-3-030-04747-4_9
Download citation
DOI: https://doi.org/10.1007/978-3-030-04747-4_9
Published:
Publisher Name: Springer, Cham
Print ISBN: 978-3-030-04746-7
Online ISBN: 978-3-030-04747-4
eBook Packages: Computer ScienceComputer Science (R0)