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15.8. References
Bastiaens, P. I. and Pepperkok, R., 2000, Observing proteins in their natural habitat: the living cell. Trends Biochem Sci 25, 631–637.
Bastiaens, P. I. and Squire, A., 1999, Fluorescence lifetime imaging microscopy: spatial resolution of biochemical processes in the cell. Trends Cell Biol 9, 48–52.
Becker, W., Bergmann, A., Hink, M. A., Konig, K., Benndorf, K. and Biskup, C., 2004. Fluorescence lifetime imaging by time-correlated single-photon counting. Microscopy Research and Technique 63, 58–66.
Berney, C. and Danuser, G., 2003, FRET or no FRET: A quantitative comparison. Biophys J 84, 3992–4010.
Borst, J. W., Hink, M. A., van Hoek, A. and Visser, A. J., 2005, Effects of refractive index and viscosity on fluorescence and anisotropy decays of enhanced cyan and yellow fluorescent proteins. J Fluoresc 15, 153–160.
Borst, J. W., Hink, M. A., van Hoek, A. and Visser, A. J., 2003, Multiphoton microspectroscopy in living plant cells. In Proceedings of SPIE, vol. 4963 ed. A. Periasamy and P. T. C. So, pp. 231–238.
Bunt, G. and Wouters, F. S., 2004, Visualization of molecular activities inside living cells with fluorescent labels. Int Rev Cytol 237, 205–277.
Burch, L. R., Scott, M., Pohler, E., Meek, D. and Hupp, T., 2004, Phage-peptide display identifies the interferon-responsive, death-activated protein kinase family as a novel modifier of MDM2 and p21 WAF1. J Mol Biol 337, 115–128.
Campbell, R. E., Tour, O., Palmer, A. E., Steinbach, P. A., Baird, G. S., Zacharias, D. A. and Tsien, R. Y., 2002, A monomeric red fluorescent protein. Proc Natl Acad Sci USA 99, 7877–7882.
Causier, B. and Davies, B., 2002, Analysing protein-protein interactions with the yeast two-hybrid system. Plant Mol Biol 50, 855–870.
Chen, Y., Mills, J. D. and Periasamy, A., 2003, Protein localization in living cells and tissues using FRET and FLIM. Differentiation 71, 528–541.
Clegg, R. M., 1996, in Fluorescence Imaging Spectroscopy and Microscopy X. Wang and B. Herman Eds. New York: Wiley.
De Folter, S., Immink, R. G., Kieffer, M., Parenicova, L., Henz, S. R., Weigel, D., Busscher, M., Kooiker, M., Colombo, L., Kater, M. M., Davies, B. and Angenet, G.C., 2005, Comprehensive interaction map of the arabidopsis MADS Box transcription factors. Plant Cell 17, 1424–1433.
Egea-Cortines, M., Saedler, H. and Sommer, H., 1999, Ternary complex formation between the MADS-box proteins SQUAMOSA, DEFICIENS and GLOBOSA is involved in the control of floral architecture in Antirrhinum majus. EMBO J 18, 5370–9.
Ferrario, S., Busscher, J., Franken, J., Gerats, T., Vandenbussche, M., Angenent, G. C. and Immink, R. G., 2004, Ectopic expression of the petunia MADS box gene UNSHAVEN accelerates flowering and confers leaf-like characteristics to floral organs in a dominant-negative manner. Plant Cell 16, 1490–1505.
Gadella, T. W., Jr., van der Krogt, G. N. and Bisseling, T., 1999, GFP-based FRET microscopy in living plant cells. Trends Plant Sci 4, 287–291.
Gerritsen, H. C., Asselbergs, M. A., Agronskaia, A. V. and Van Sark, W. G., 2002, Fluorescence lifetime imaging in scanning microscopes: acquisition speed, photon economy and lifetime resolution. J Microsc 206, 218–224.
Gerritsen, H. C. and De Grauw, C. J., 1999, Imaging of optically thick specimen using two-photon excitation microscopy. Microscopy Research and Technique 47, 206–209.
Gordon, G. W., Berry, G., Liang, X. H., Levine, B. and Herman, B., 1998, Quantitative fluorescence resonance energy transfer measurements using fluorescence microscopy. Biophys J 74, 2702–2713.
Gratton, E., Breusegem, S., Sutin, J. and Ruan, Q. Q., 2003, Fluorescence lifetime imaging for the two-photon microscope: time-domain and frequency-domain methods. J Biomed Opt 8, 381–390.
Hara, M., Bindokas, V., Lopez, J. P., Kaihara, K., Landa, L. R., Jr., Harbeck, M. and Roe, M. W.,2004, Imaging endoplasmic reticulum calcium with a fluorescent biosensor in transgenic mice. Am J Physiol Cell Physiol 287, C932–938.
Haputs, U., Maiti, S., Schwille, P. and Webb, W. W., 1998, Dynamics of fluorescence fluctuations in green fluorescent protein observed by fluorescence correlation spectroscopy. Proc Natl Acad Sci USA 95, 13573–13578.
Herman, B., 1998, Fluorescence Microscopy. BIOS Scientific Publishers, New York.
Hink, M. A., Bisseling, T. and Visser, A. J. 2002. Imaging protein-protein interactions in living cells. Plant Mol Biol 50, 871–883.
Ho, F. M. and Hall, E. A., 2004, A strand exchange FRET assay for DNA. Biosens Bioelectron 20, 1001–1010.
Honma, T. and Goto, K., 2001, Complexes of MADS-box proteins are sufficient to convert leaves into floral organs. Nature 409, 525–529.
Immink, R. G., Ferrario, S., Busscher-Lange, J., Kooiker, M., Busscher, M. and Angenent, G. C., 2003, Analysis of the petunia MADS-box transcription factor family. Mol Genet Genomics 268, 598–606.
Immink, R. G. H., Gadella, T. W. J., Ferrario, S., Busscher, M. and Angenent, G. C., 2002, Analysis of MADS box protein-protein interactions in living plant cells. Proc Natl Acad Sci USA 99, 2416–2421.
Jares-Erijman, E. A. and Jovin, T. M. 2003. FRET imaging. Nat Biotechnol 21, 1387–1395.
Karpova, T. S., Baumann, C. T., He, L., Wu, X., Grammer, A., Lipsky, P., Hager, G. L. and McNally, J. G., 2003, Fluorescence resonance energy transfer from cyan to yellow fluorescent protein detected by acceptor photobleaching using confocal microscopy and a single laser. J Microsc 209, 56–70.
Kenworthy, A. K., 2001, Imaging protein-protein interactions using fluorescence resonance energy transfer microscopy. Methods 24, 289–296.
Kneen, M., Farinas, J., Li, Y. and Verkman, A. S. 1998. Green fluorescent protein as a noninvasive intracellular pH indicator. Biophys J 74, 1591–1599.
Lakowicz, J. R., 1999, Principles of Fluorescence Spectroscopy, 2nd edition. New York: Kluwer Academic/Plenum Publishers.
Lippincott-Schwartz, J., Snapp, E. and Kenworthy, A., 2001, Studying protein dynamics in living cells. Nat Rev Mol Cell Biol 2, 444–456.
Mahajan, N. P., Harrison-Shostak, D. C., Michaux, J. and Herman, B., 1999, Novel mutant green fluorescent protein protease substrates reveal the activation of specific caspases during apoptosis. Chem Biol 6, 401–409.
Matz, M. V., Fradkov, A. F., Labas, Y. A., Savitsky, A. P., Zaraisky, A. G., Markelov, M. L. and Lukyanov, S. A., 1999, Fluorescent proteins from nonbioluminescent Anthozoa species. Nat Biotechnol 17, 969–973.
Miyawaki, A., Griesbeck, O., Heim, R. and Tsien, R. Y., 1999, Dynamic and quantitative Ca2+ measurements using improved cameleons. Proc Natl Acad Sci USA 96, 2135–2140.
Miyawaki, A., Llopis, J., Heim, R., McCaffery, J. M., Adams, J. A., Ikura, M. and Tsien, R. Y., 1997, Fluorescent indicators for Ca2+ based on green fluorescent proteins and calmodulin. Nature 388, 882–887.
Morgan, M. J. and Thorburn, A., 2001, Measurement of caspase activity in individual cells reveals differences in the kinetics of caspase activation between cells. Cell Death Differ 8, 38–43.
Nougalli-Tonaco, I. A., Borst, J. W., Vries, S. C., Angenent, G. C. and Immink, R. G., 2006, In vivo imaging of MADS box transcription factor interactions. Submitted.
Offterdinger, M., Georget, V., Girod, A. and Bastiaens, P. I., 2004, Imaging phosphorylation dynamics of the epidermal growth factor receptor. J. Biol Chem 279, 36972–36981.
Pellegrini, L., Tan, S. and Richmond, T. J., 1995, Structure of serum response factor core bound to DNA. Nature 376, 490–498.
Peter, M., Ameer-Beg, S. M., Hughes, M. K., Keppler, M. D., Prag, S., Marsh, M., Vojnovic, B. and Ng, T., 2005, Multiphoton-FLIM quantification of the EGFP-mRFP1 FRET pair for localization of membrane receptor-kinase interactions. Biophys J 88, 1224–1237.
Raicu, V., Jansma, D. B., Miller, R. J. and Friesen, J. D., 2005, Protein interaction quantified in vivo by spectrally resolved fluorescence resonance energy transfer. Biochem J 385, 265–277.
Riechmann, J. L. and Meyerowitz, E. M., 1997, MADS domain proteins in plant development. Biol Chem 378, 1079–1101.
Rizzo, M. A., Springer, G. H., Granada, B. and Piston, D. W., 2004, An improved cyan fluorescent protein variant useful for FRET. Nat Biotechnol 22, 445–449.
Russinova, E., Borst, J. W., Kwaaitaal, M., Cano-Delgado, A., Yin, Y., Chory, J. and de Vries, S. C., 2004, Heterodimerization and Endocytosis of Arabidopsis Brassinosteroid Receptors BRI1 and AtSERK3 BAK1. Plant Cell 16, 3216–3229.
Shaner, N. C., Campbell, R. E., Steinbach, P. A., Giepmans, B. N., Palmer, A. E. and Tsien, R. Y., 2004, Improved monomeric red, orange and yellow fluorescent proteins derived from Discosoma sp. red fluorescent protein. Nat Biotechnol 22, 1567–72.
Shore, P. and Sharrocks, A. D., 1995, The MADS-box family of transcription factors. Eur J Biochem 229, 1–13.
Squire, A. and Bastiaens, P. I., 1999, Three dimensional image restoration in fluorescence lifetime imaging microscopy. J Microsc 193, 36–49.
Suhling, K., Siegel, J., Phillips, D., French, P. M., Leveque-Fort, S., Webb, S. E. and Davis, D. M., 2002, Imaging the environment of green fluorescent protein. Biophys J 83, 3589–3595.
Terry, B. R., Matthews, E. K. and Haseloff, J., 1995, Molecular characterisation of recombinant green fluorescent protein by fluorescence correlation microscopy. Biochem Biophys Res Com 217, 21–27.
Tsien, R. Y., 1998, The green fluorescent protein. Annu Rev Biochem 67, 67509–67544.
Verkhusha, V. V. and Lukyanov, K. A. 2004. The molecular properties and applications of Anthozoa fluorescent proteins and chromoproteins. Nat Biotechnol 22, 289–296.
Voss, T. C., Demarco, I. A. and Day, R. N., 2005, Quantitative imaging of protein interactions in the cell nucleus. Biotechniques 38, 413–424.
Wallrabe, H., Elangovan, M., Burchard, A., Periasamy, A. and Barroso, M., 2003, Confocal FRET microscopy to measure clustering of ligand-receptor complexes in endocytic membranes. Biophys J 85, 559–571.
Wilson, G. S. and Gifford, R., 2005, Biosensors for real-time in vivo measurements. Biosens Bioelectron 20, 2388–2403.
Wouters, F. S. and Bastiaens, P. I., 1999, Fluorescence lifetime imaging of receptor tyrosine kinase activity in cells. Curr Biol 9, 1127–1130.
Wouters, F. S., Verveer, P. J. and Bastiaens, P. I. H., 2001, Imaging biochemistry inside cells. Trends Cell Biol 11, 203–211.
Xia, Z. and Liu, Y., 2001, Reliable and global measurement of fluorescence resonance energy transfer using fluorescence microscopes. Biophys J 81, 2395–2402.
Xu, X., Gerard, A. L., Huang, B. C., Anderson, D. C., Payan, D. G. and Luo, Y., 1998, Detection of programmed cell death using fluorescence energy transfer. Nucleic Acids Res 26, 2034–2035.
Zacharias, D. A., Violin, J. D., Newton, A. C. and Tsien, R. Y., 2002, Partitioning of lipid-modified monomeric GFPs into membrane microdomains of live cells. Science 296, 913–916.
Zhang, J., Campbell, R. E., Ting, A. Y. and Tsien, R. Y., 2002, Creating new fluorescent probes for cell biology. Nat Rev Mol Cell Biol 3, 906–918.
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Borst, J.W., Nougalli-Tonaco, I., Hink, M.A., van Hoek, A., Immink, R.G.H., Visser, A.J.W.G. (2006). Protein-Protein Interactions In Vivo: Use of Biosensors Based on FRET. In: Geddes, C.D., Lakowicz, J.R. (eds) Reviews in Fluorescence 2006. Reviews in Fluorescence, vol 2006. Springer, Boston, MA. https://doi.org/10.1007/0-387-33016-X_15
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