Background

Nonalcoholic fatty liver disease (NAFLD) is the hepatic manifestation of metabolic syndrome, a spectrum of liver diseases ranging from simple steatosis to nonalcoholic steatohepatitis, cirrhosis, and even transformation to liver cancer [1, 2]. NAFLD is now the most prevalent liver disease worldwide, with a global prevalence between 25% and 45% [3]. In 2019, NAFLD became the number one chronic liver disease and the leading cause of abnormal liver biochemistry in health screenings [4]. The main pathogenesis of NAFLD is due to hepatic lipid accumulation and disturbed glucose metabolism [5]. Steatosis, or generalized fat buildup in vesicles that replace the cytoplasm of hepatocytes, is a hallmark of NAFLD. There is currently no established protocol for the potential mechanism and effective management of the onset and progression of NAFLD, which mostly involves dietary and lifestyle improvements. Such measures can slow the course of NAFLD and effectively control it by lowering liver lipids, enhancing the activation of liver enzymes, and decreasing plasma triglycerides [6]. According to increasing amounts of data, the gut-liver axis is linked to the development and progression of NAFLD, and is thought to be a potential approach for treating NAFLD [7,8,9,10].

In recent years, numerous studies have shown that patients with NAFLD exhibit variation in the intestinal microbiota and an increase in the occurrence of small intestinal bacterial overgrowth, and these changes seem to be related to the severity of NAFLD. Therefore, aiming to intervene in the gut flora of patients with NAFLD, the use of prebiotics, probiotics, or synbiotics has been the subject of current research [11, 12]. Prebiotics, probiotics, or synbiotics improve the health status of patients with NAFLD through effects on the intestinal flora, such as delaying the onset of the disease by balancing intestinal microbes, permeability, and inflammation when provided at an adequate dosage and for a sufficient duration [13, 14]. Moreover, this treatment protocol not only regulates intestinal microbial homeostasis, permeability, and inflammation, but also enhances the production of short-chain fatty acids such as butyrate through microbial pathways, influences energy metabolism in the gut and systemically, and achieves therapeutic effects to ameliorate disease through the gut-liver axis [15, 16].

Live microbial nutrient supplements called “probiotics” help the equilibrium of intestinal bacteria in the host organism [17]. A previous study showed that the administration of probiotic organisms could exert a lipid-lowering effect to maintain cardiovascular well-being [18,19,20]. Prebiotics are organic compounds that the host does not digest or absorb; instead, they selectively encourage the growth and multiplication of healthy bacteria such as Bifidobacteria, which enhances the host’s wellness [21]. Previous systematic reviews have explored the potential of prebiotics in the treatment of NAFLD by Stachowska et al. [21], who demonstrated that prebiotics could improve anthropometric parameters and liver enzyme levels. Synbiotics, in a preparation called symbiosis, combine probiotics and prebiotics, sometimes with the addition of vitamins, trace minerals, etc. Probiotics and prebiotics can cooperate to prevent disease and retain the microecological balance of the organism by bringing into play both the physiological and bacterial activities of the former [22]. A systematic review and meta-analysis by Khan et al. [23] revealed that probiotics and synbiotics could not only reduce liver enzymes, but also decrease inflammatory cytokines in patients with NAFLD. However, regarding the potential efficacy of employing microbiota treatment in the clinical care of patients with NAFLD, the available evidence is contradictory.

The potential for improving NAFLD with probiotics, prebiotics, and synbiotics has already been examined in meta-analyses and systematic reviews [17, 23,24,25,26]. Nevertheless, other meta-analysis studies included only a small number of published articles, some of which focused solely on the effectiveness of probiotics or prebiotics, and concentrated on the outcomes of insulin resistance and lipid profiles (and not liver-specific outcomes) [11, 27,28,29]. We investigated the improvements in liver-specific indicators, lipid profiles, and inflammation induced by probiotics, prebiotics, and synbiotics through a meta-analysis to obtain more conclusive results.

Methods

Search strategy

This systematic review and meta-analysis of randomized controlled trials (RCTs) were carried out following the PRISMA guidelines, which recommend reporting items for systematic reviews and meta-analyses. The literature search was performed in Embase, PubMed, Cochrane Library, and Web of Science from inception to March 2024. The following search strings were used in the search process: (“probiotic” OR “synbiotic” OR “prebiotic”) in combination with (“non-alcoholic fatty liver disease”) and (“randomized controlled trials”), and a lookup of the relevant free words in databases of foreign language literature such as PubMed. To identify intersections, we used the subjects and free words with the Boolean operation AND/OR to search for target articles in abstract keywords or titles, and the language was limited to English. Moreover, the reference or citation lists of the retrieved articles were checked to search for further relevant studies. The full search approach is detailed in Appendix 1 Supplemental Table 1.

Inclusion criteria and exclusion criteria

Inclusion criteria

Original studies were included if they met the following criteria: (1) each subject included in the literature complied with the Chinese Medical Association’s Guidelines for the Treatment of Non-Alcoholic Fatty Liver Disease (2010 version); (2) the inclusion of data with spelled out means, standard deviations, or standard deviations that can be computed mathematically; and (3) randomized controlled trial with a control group or placebo, and an intervention group of probiotic, prebiotic, or synbiotic for NAFLD. No restrictions on the utilization of blinding or allocation concealment were placed on the randomized controlled trial. The research question for the systematic review was established using criteria (Table 1).

Table 1 PICOS criteria for inclusion and exclusion for studies

Exclusion criteria

Original studies were excluded if they met the following criteria: (1) were duplicate literature; (2) were reviews, case reports, conference proceedings, or article for which data were unavailable, for which the article statements were not available; (3) had viral hepatitis, alcoholic hepatitis, drug-related hepatitis, autoimmune hepatitis, or chronic liver diseases caused by genetic metabolic diseases; (4) had apparent errors in the statistical methods or contradictory experimental results; or (5) were nonrandomized controlled trials or animal experiments (Table 1).

Study screening and data extraction

Duplicate literature was removed using Endnote software and manual reading, and the read titles and abstracts of the remaining publications were then assessed to determine whether the literature met the inclusion criteria. Data extraction was independently conducted using a standardized data collection by two investigators (Y.Y., W.M.), and a third evaluator (C.Y.) was asked to jointly discuss whether to include the literature that had different opinions. The data extracted included the basic information of the included studies, including the first author, year of publication, case number, age, intervention measures, treatment course, and outcome indicators.

The primary outcome indicators included liver-related outcomes, namely, serum Alanine aminotransferase (ALT), aspartate aminotransferase (AST) levels, changes in hepatic fibrosis via elastography, and changes in hepatic steatosis via ultrasound. The secondary outcomes were body mass index (BMI), g-glutamyltransferase (GGT), alkaline phosphatase (ALP), total cholesterol (TC), triglyceride (TG), high-density lipoprotein (HDL), low-density lipoprotein (LDL), high-sensitivity C-reactive protein (hs-CRP), tumour necrosis factor α (TNF-α), lipopolysaccharide (LPS), and interleukin 6 (IL-6) levels.

Study quality assessment

The quality of the included literature was evaluated based on the Cochrane risk of bias assessment tool, which was divided into the following areas: (1) selection bias (random sequence generation) (2) selection bias (allocation concealment) (3) implementation bias (blinding of investigators and subjects) (4) measurement bias (blinded evaluation of study outcomes) (5) follow-up bias (completeness of outcome) (6) reporting bias (selective reporting of study results), and (7) other bias (other sources of bias). RevMan 5.4 software was used to classify the above biases as “low risk”, “high risk”, or “unclear risk”. We comprehensively evaluated the “risk” levels and the reasonableness and stringency of each article. Funnel plots were also used to evaluate publication bias.

Statistical analysis

The data from the included studies were synthesized and analysed by Stata MP 16, and the quality of the included literatures was estimated by RevMan 5.4. The included studies must contain at least 1 of the above outcomes of interest for this review and include the baseline and endpoint values or net changes between them with the mean and standard deviation available. Considering the different scales for some outcomes used in the original studies, we calculated the standardized mean difference (SMD) and its 95% confidence interval (95% CI) to observe continuous outcomes, while effect size will be represented by odds ratios (ORs) and 95% CI for continuous data if the assessment tools were the same across the original studies.

The heterogeneity among studies was examined through the Q test and the I2 value. Random-effects or fixed-effects models were used based on the results of the heterogeneity test; P < 0.05 or I2 > 50% was considered to indicate significant heterogeneity, and a random-effect model was used to conduct the meta-analysis (I2 > 25%); otherwise, a fixed-effect model was used (I2 ≤ 25%). Meta-regression was conducted to examine the characteristics of the studies that were hypothesized to influence the observed treatment effects. The association between the overall estimate of effect sizes and potential moderator variables, including intervention type, country, intervention duration, and sample size, was assessed.

Further subgroup analyses were performed to explore the impacts of certain characteristics: intervention duration (≤ 12 weeks and > 12 weeks), country (Asian and Europe & US (European and American countries)), intervention type (probiotic, prebiotic, and synbiotic), and sample size (> 40 and ≤ 40). The Begg’s and Egger’s test tests were used to assess the publication bias of the studies included in the final analysis. The alpha level for statistical significance was set at 0.05.

Results

Selection and characteristics of studies

Figure 1 illustrates the procedure for extracting the data. Using the planned search technique, the last electronic database search was completed on March 17, 2024, and 2,079 articles were retrieved. Ultimately, the qualitative review included 34 double-blind, randomized, placebo-controlled trials [30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46,47,48,49,50,51,52,53,54,55,56,57,58,59,60,61,62,63].

Fig. 1
figure 1

Flowchart for selecting articles included in this Systematic Review

The characteristics of the included trials are summarized in Table 2. Except for fibrosis (I2 = 22.00%) and steatosis (I2 = 0.00%), all included studies employed a random-effects model. All included studies were conducted between 2012 and 2024. Of the 34 included studies, 20 were conducted in Asia, and the remaining 14 were conducted in Europe, America and Africa. The therapeutic interventions were prebiotic in 5 studies, probiotic included 19 studies, and synbiotic in 10 studies. The intervention duration of the studies ranged from 8 to 56 weeks. The age of the participants was less than 18 years in 2 studies, and the age of the remaining 32 studies was more than 18 years. Patient and control sample sizes ranged from 14 to 140. The risk of bias was assessed as shown in Fig. 2 and Appendix 1 Supplementary Fig. 1.

Table 2 Characteristics of included trials
Fig. 2
figure 2

Review authors’ judgements about each risk of bias item presented as percentages across all included studies

Among the 34 studies, 91.18% reported adequate random sequence generation but were considered high risk in one study and unclear in the remaining two. The risk of bias in allocation concealment was 61.76%, and the risk in one trial was high and unclear in thirteen studies. The outcome assessment was double- or triple-blinded in 55.88% of the trials and was unclear in fifteen trials. A total of 70.59% of the trials had a low risk of bias due to the blinding of participants and key researchers, and ten trials had an unclear risk of bias. Additionally, a low risk of bias was shown in most of the trials based on incomplete outcome data and selective outcome reporting but was unclear in the two studies. The biases were mainly derived from blinding and unrealized allocation concealment in the outcome assessment, followed by nonspecific implementer and participant double-blinding.

Effects of primary outcomes

Hepatic fibrosis

The effect of probiotics, prebiotics, and synbiotics on improvingt in hepatic fibrosis, as measured by elastography, was assessed in 6 studies (339 participants). The combined SMD for hepatic fibrosis significantly decreased (SMD = -0.31; 95% CI: -0.53, -0.09) (Fig. 3A). There was low between-study heterogeneity among the studies (I2 = 22.00%). Subgroup analysis revealed that probiotics could effectively improve hepatic fibrosis (SMD = -0.58; 95% CI: -0.94, -0.22). Furthermore, there was a promising effect on treating hepatic fibrosis when the duration of intervention was more than 12 weeks (SMD = -0.35; 95% CI: 0.61, -0.10). Country and sample size may be factors influencing heterogeneity (Table 3). There was no evidence of publication bias (Egger’s tests = 0.33; Begg’s tests = 0.76) (Appendix 2 Figure S1). As shown in Appendix 1 Supplemental Table 2, the quality of evidence for hepatic fibrosis was rated as high.

Fig. 3
figure 3

Forest plot of the effect of microbiota therapies on primary outcomes. (A) The role of microbiota-therapy on hepatic fibrosis on different interventions. (B) The role of microbiota-therapy on hepatic steatosis on different interventions. (C) The role of microbiota-therapy on AST on different interventions. (D) The role of microbiota-therapy on ALT on different interventions

Table 3 Results of subgroup analysis of included randomized controlled trials in the meta-analysis of primary outcomes

Hepatic steatosis

Five studies with 205 participants evaluated the impact of probiotics, prebiotics, and synbiotics on reducing hepatic steatosis determined by liver ultrasound. Neither probiotics, nor prebiotics, nor synbiotics improved moderate/severe hepatic steatosis (OR: 0.95; 95% CI: 0.62, 1.41) (Fig. 3B). There was low between-study heterogeneity among the studies (I2 = 0.00%). No significant small-study effects were found using Begg’s tests and Egger’s (P = 0.55 and P = 0.69), respectively). As shown in Appendix 1 Supplemental Table 2, the quality of evidence for hepatic fibrosis was rated as moderate (based on inconsistency).

AST

According to the meta-analysis of 26 studies (1515 participants), probiotics, prebiotics, and synbiotics significantly reduced AST levels, and the pooled estimate of SMD = -0.35 (95% CI: -0.55, -0.15; I2 = 73.10% was reported. Country, intervention duration, sample size, and intervention type were detected as sources of heterogeneity (Table 3). Subgroup analysis revealed that the reducing effects of probiotic supplementation were greater than those of other intervention types (SMD = -0.39; 95% CI: -0.63, -0.15) (Fig. 3C), and the effectiveness of probiotic, prebiotic, and synbiotic supplementation on decreasing AST levels was greater in studies with sample sizes > 40. Moreover, the beneficial effect on alleviating AST levels occurred irrespective of the intervention time and country. No significant small-study effect was shown using Egger’s and Begg’s tests (P = 0.70 and P = 0.49, respectively) (Appendix 2 Figure S3). GRADE results showed that the evidence for AST was of had high quality (Appendix 1 Supplemental Table 2).

ALT

The effects of probiotics, prebiotics, and synbiotics on ALT levels were reported in 27 studies (1501 participants). Our analysis revealed a significant reduction in ALT levels (SMD = -0.48; 95% CI: -0.71, -0.25). Compared with control, probiotics (SMD = -0.41; 95% CI: -0.66, -0.12) and prebiotics (SMD = -1.51; 95% CI: -2.19, -0.83) were associated with a significantly greater reduction in ALT (Fig. 3D). Subgroup analysis revealed that probiotics, prebiotics, and synbiotics supplementation contributed to a more robust decrease in ALT levels in studies with duration of ≤ 12 weeks. Moreover, there was an improvement in lowering ALT levels irrespectively of country and sample size (Table 3). Egger weighted regression statistics (P < 0.01) indicated that there was publication bias. Additional analysis with the trim and fill method revealed four missing studies, and after imputation, the overall effect size did not change (SMD= -0.44; 95% CI: -0.54, -0.35; P < 0.01). Based on the GRADE method, there was a moderate level of evidence for ALT (based on inconsistency) (Appendix 1 Supplemental Table S3).

Effects of secondary outcomes

BMI

A meta-analysis of the relevant data from 19 studies (1058 participants) revealed 89.80% heterogenety, and the results of a random effects model revealed that probiotics (SMD = -0.98; 95% CI: -1.87, -0.08) had a discernible impact on BMI (Fig. 4A). Subgroup analysis revealed that patients from Asia (SMD = -0.52; 95% CI: -0.95, -0.08) and duration of treatment greater than 12 weeks (SMD = -0.77; 95% CI: -1.38, -0.16) were associated with a reduced BMI. In, addition, there was decreasing effect on BMI regardless of sample size (> 40: SMD = -0.58; 95% CI: -1.12, -0.02; ≤ 40: SMD = -0.43; 95% CI: -0.75, -0.10) (Appendix 1 Supplemental Table 3). There was a significant small-study effects using Egger’s tests (P = 0.02). The trim-and-fill analysis suggested that five iterations of the iterative technique did not significantly change the pooled effect size estimates did not significantly change (SMD = -0.61, 95% CI: -0.72, -0.50), which indicates that the results are generally stable and that publication bias has little impact. Appendix 1 Supplemental Table 2 presents the quality of evidence (calculated by the GRADE method) for BMI that was high.

Fig. 4
figure 4

Forest plot of the effect of microbiota therapies on BMI, ALP, and GGT. (A) The role of microbiota-therapy on BMI on different interventions. (B) The role of microbiota-therapy on ALP on different interventions. (C) The role of microbiota-therapy on GGT on different interventions

ALP

Eight studies (338 participants) evaluated the effect of probiotics, prebiotics, and synbiotics supplementation on ALP levels among NAFLD patients. Overall, there was significant reduction compared to that in placebo group (SMD = -0.81; 95% CI: -1.55, -0.8) (Fig. 4B). Subgroup analysis revealed the effectiveness of probiotics, prebiotics, and synbiotics supplementation in lowering ALP levels in studies with a treatment duration ≤ 12 weeks (SMD = -1.39; 95% CI: -2.59, -0.19) and in individuals from Asia (SMD = -1.09; 95% CI: -2.05, -0.13) (Appendix 1 Supplemental Table 3). Begg’s (P = 0.07) and Egger’s tests (P = 0.11) suggested no publication bias. ALP has a moderate level of evidence due to inconsistency based on the GRADE method (Appendix 2 Supplemental Table 2).

GGT

Consistently, a forest plot of 15 datasets (860 participants) did not indicate a significant reduction in GGT levels after taking probiotics, prebiotics, or synbiotics compared to the placebo (SMD = -0.23; 95% CI: -0.57, 0.16; I2 = 82.60%) (Appendix 1 Supplemental Table 3). Subgroup analysis by study population, sample size, and intervention duration did not reveal the source of heterogeneity Furthermore, symbiotics, but not probiotics or prebiotics, were associated with a greater reduction in GGT levels (Fig. 4C). There was no publication bias according to the Begg’s (P = 0.36) and Egger’s tests (P = 0.79). The result of the GRADE results showed that the evidence for GGT was of moderate quality, which was reduced by inconsistency (Appendix 1 Supplemental Table 2).

HDL

Twenty trials (1307 participants) reported the effect of probiotics, prebiotics, and synbiotics on HDL (Fig. 5A). The pooled effect size indicated no significant improvement in HDL compared to the placebo (SMD = -0.10; 95% CI: -0.32, 0.13, I2 = 74.30%). Subgroup analysis indicated that according to the study population, sample size, intervention duration and intervention type did not improve HDL levels (Appendix 1 Supplemental Table 4). No significant small-study effect was shown using Egger’s and Begg’s tests (P = 0.22 and P = 0.41, respectively). GRADE results showed that the evidence for HDL was of high quality (Appendix 1 Supplemental Table 2).

Fig. 5
figure 5

Forest plot of the effect of microbiota therapies on lipid profiles in patients with NAFLD. (A) The role of microbiota-therapy on HDL on different interventions. (B) The role of microbiota-therapy on LDL on different interventions. (C) The role of microbiota-therapy on TG on different interventions. (D) The role of microbiota-therapy on TC on different interventions

LDL

Nineteen trials (1242 participants) evaluated the effect of probiotics, prebiotics, and synbiotics on LDL levels among NAFLD patients. Overall, there was no significant reduction in LDL compared to that in the placebo group (SMD = -0.21; 95% CI: -0.48, 0.06) (Appendix 1 Supplemental Table 4). Subgroup analysis revealed that prebiotic (SMD = -1.22; 95% CI: -2.23, -0.22) and synbiotic (SMD = -0.47; 95% CI: -0.91, -0.02) supplementation attenuated LDL levels (Fig. 5B). In addition, the effectiveness of the intake of prebiotics, probiotics, and synbiotics had a reducing-effect on LDL levels in subjects from Asia (SMD = -0.50; 95% CI: -0.75, -0.25) and those with an intervention time less than 12 weeks (SMD = -0.34; 95% CI: -0.60, -0.08). No significant small-study effects were found using Egger’s and Begg’s tests (P = 0.20 and P = 0.54, respectively). LDL has a moderate level of evidence due to inconsistency based on the GRADE method (Appendix 1 Supplemental Table 2).

TG

Twenty-four trials (1493 participants) reported the effect of microbiota treatment on TG. The meta-analysis revealed that the administration of probiotics, prebiotics, and synbiotics decreased TG levels (SMD = -0.22; 95% CI: -0.43, -0.02; I2 = 72.70%) (Appendix 1 Supplemental Table 4). Subgroup analysis showed that the lowering effects of probiotics, prebiotics, and synbiotics occurred in subjects from Asia (SMD = -0.36; 95% CI: -0.64, -0.09) and a positive effect on TG was detected in individuals supplemented with prebiotic (SMD = -0.89, 95% CI: -1.68, -0.10) (Fig. 5C). No evidence of publication bias was detected according to Egger’s (P = 0.76)) and Begg’s tests (P = 0.38). TG had a high level of evidence based on the GRADE method (Appendix 1 Supplemental Table 2).

TC

The pooled effect size of twenty-one studies (1281 participants) revealed that there was no significant effect of the probiotics, prebiotics, or synbiotics treatment on TC (SMD = -0.26; 95% CI: -0.54, 0.03) (Appendix 1 Supplemental Table 4). Subgroup analysis revealed a greater reduction in patients receiving prebiotics (SMD = -0.69; 95% CI: -0.98, -0.40) (Fig. 5D). Furthermore, there was a positive effect on alleviating TC levels when subjects were Asian (SMD = -0.57; 95% CI: -0.93, -0.20), had a duration of treatment less than 12 weeks (SMD = -0.52; 95% CI: -0.96, -0.09), and had a sample size less than forty (SMD = -0.87; 95% CI: -1.64, -0.10). No evidence of publication bias was detected according to Egger’s (P = 0.89) and Begg’s tests (P = 0.56). There was a moderate level of evidence for TC due to inconsistency based on the GRADE method (Appendix 1 Supplemental Table 2).

hs-CRP

The quantitative analysis of hs-CRP values (12 trials, 637 participants) indicated a significant reduction in hs-CRP compared to that in the placebo group (SMD = -0.47; 95% CI: -0.88, -0.06) with high heterogeneity across studies (I2 = 84.00%) (Fig. 6A). Subgroup analysis indicated that by study population, sample size, intervention duration and intervention types did not have a promising effect on improving hs-CRP levels (Appendix 1 Supplemental Table 5). No evidence of publication bias was detected according to Egger’s (P = 0.09) and Begg’s tests (P = 0.64). Appendix 1 Supplemental Table 2 presents the quality of evidence (calculated by the GRADE method) for hs-CRP which was moderate due to inconsistency.

Fig. 6
figure 6

Forest plot of the effect of microbiota therapies on inflammation factors in patients with NAFLD. (A) The role of microbiota-therapy on hs-CRP on different interventions. (B) The role of microbiota-therapy on TNF-α on different interventions. (C) The effect of microbiota therapies on IL-6. (D) The effect of microbiota therapies on LPS

TNF-α

The quantitative analysis of TNF-α (10 trials, 412 participants) indicated a significant reduction compared to that in the placebo group (SMD = -0.86; 95% CI: -1.56, -0.56) with high heterogeneity across studies (I2 = 90.50%). Subgroup analysis revealed a more prominent effect of synbiotics supplementation on TNF-α levels (SMD = -0.74; 95% CI: -1.38, -0.10) (Fig. 6B). Moreover, the observed decreasing impact was greater in studies with larger sample sizes (≤ 40), and with Asian subjects (Appendix 1 Supplemental Table 5). Egger’s test revealed publication bias (P = 0.04). The trim-and-fill analysis suggested that three iterations of the iterative technique did not significantly change the pooled effect size estimates (SMD = -1.04, 95% CI: -1,79, -0.30), which indicates that the results are generally stable and that publication bias has little impact. There was a moderate level of evidence TNF-α due to inconsistency (Appendix 1 Supplemental Table 2).

IL-6

Eight trials were conducted (379 participants) to evaluate the effect of the probiotics, prebiotics, and synbiotics supplementation on IL-6 levels among NAFLD patients. There was no significant reduction in the mean difference in IL-6 (SMD = -0.55; 95% CI: -1.21, 0.12; I2 = 89.00%) (Appendix 1 Supplemental Table 5). Subgroup analysis indicated that the study population, sample size, intervention duration and intervention types did not improve IL-6 levels (Fig. 6C). There was no publication bias, as determined by the Begg’s (P = 0.20) and Egger’s tests (P = 0.15). There was a had a moderate level of evidence for IL-6 due to inconsistency based on the GRADE method (Appendix 1 Supplemental Table 2).

LPS

The meta-analysis of 3 trials (115 participants) revealed that probiotics, prebiotics, or synbiotics supplementation did not affect the reduction of LPS levels (SMD = -1.15; 95% CI: -3.18, 0.87) (Fig. 6D). We did not perform further subgroup analyses due to the small number of literatures. No significant small-study effect was shown using Egger’s and Begg’s tests (P = 0.37 and P = 0.06, respectively). Appendix 1 Supplemental Table 2 presents the quality of evidence (calculated by the GRADE method) for LPS which was moderate due to inconsistency.

Discussion

A total of 34 RCTs assessing microbial treatments in NAFLD patients were found in this meta-analysis. We observed that probiotics, prebiotics, and synbiotics supplementation improved not only liver histology (hepatic fibrosis) and liver function (AST, ALT, and ALP) but also TG levels and BMI. Moreover, it significantly decreased the levels of inflammatory markers including TNF-α and hs-CRP. Intervention duration, study population, sample size, and treatment types were potential sources of heterogeneity in the different subgroup analyses.

Improvement in liver function in patients with NAFLD is clinically measured by quantifying established clinical diagnostic indicators of liver dysfunction, such as ALT, AST, and ALP, which are thought to be reliable signs of liver damage. It has been discovered that microbiota treatments are successful in lowering liver enzymes in the NAFLD patients [12, 64]. When the intestinal microbiota is dysbiosis, the enterotoxins secreted by pathogenic bacteria, such as endotoxin (lipopolysaccharide), increase the permeability of the intestinal mucosa, leading to bacterial translocation, which can cause endotoxemia and long-term damage to liver cells [65]. Probiotics can regulate intestinal ecological disorders and improve the integrity of the intestinal mucosal barrier, thereby reducing the inflammatory response of the liver [66]. According to this analysis, supplementation with probiotics was linked to lower levels of AST, ALT and ALP, which may have a protective impact by changing the gut’s microbial makeup and metabolism in NAFLD patients [67]. Subgroup analysis of liver enzyme levels showed that intervention durations ≤ 12 weeks were more conducive to reducing ALT and ALP levels, while a reduction in AST levels occured regardless of the duration of treatment. A systematic review and meta-analysis also showed that probiotics supplements should be continued for at least 12 weeks [68]. Another 12-week study showed that probiotics supplementation was able to decrease ALT and AST compared to control group [37]. In addition, we carefully examined the duration of the included treatment and discovered that the majority of the intervention time in the literature were approximately 12 weeks [31, 37, 39, 69,70,71]. Therefore, we speculated that 12 weeks might be the required time for probiotics to fully take effect. Furthermore, our study demonstrated that probiotics had a more beneficial impact on hepatic fibrosis. Some studies have shown that the development of pathogenic intestinal bacteria results in an increase in endotoxin, which can worsen the hepatic fibrosis process in cirrhotic rats and increase blood levels of AST and ALT. Endotoxin increases the permeability of hepatocytes to potassium ions, leading to mitochondrial swelling and impaired adenosine triphosphate (ATP) production, resulting in swelling or necrosis of hepatocytes, and leading to fibrotic changes [72].

Researchers investigated the BMI of NAFLD patients in the included studies and revealed that probiotics, preciotics, or synbiotics supplementation could reduce BMI. Probiotic supplements have been shown in earlier research to benefit weight loss, lower body fat mass, and decrease waist circumference in overweight people, improving body composition and fat distribution [73]. Previous studies have shown that probiotics can produce short chain fatty acids (SCFAs). The binding of SCFAs to specific g-protein coupled receptors can stimulate the release of glucagon like peptides (GLP-1) and GLP-2 to maintain energy homeostasis and enhance fat storage, which is consistent with our results [68, 74, 75]. The results of meta-analysis revealed that microbial treatments could significantly decrease lipid levels, which was consistent with the findings of Musazadeh et al. [76]. Subgrouping the studies based on the intervention type showed that prebiotics supplementation had more beneficial effects on lipid profiles compared to probiotics or synbiotics. Prebiotics are water-soluble dietary fibers that cannot be directly digested and absorbed by the human body; they can regulate the intestinal environment and selectively promote the proliferation of various beneficial bacteria in the intestine [77]. Research has demonstrated that prebiotics can control the expression of genes related to lipogenic enzymes, lessen the production of hepatic fatty acids at the source, and consequently lower the levels of hepatic triglycerides [78]. An animal study also showed that prebiotics could reduce liver fat and lower serum cholesterol levels in non-alcoholic fatty liver disease model rats [79]. The study population is another important factor that changes the overall effect. Supplementation of Asian populations with probiotics, prebiotics, or synbiotics leads to improvements in TG, TC, and LDL levels. The reason for this observation may be the diet structure, the Asian diet is dominated by grains, with a large number of vegetables and fruits, supplemented by bean products and fish and shellfish. Hence, compared to those of individuals in Europe, America, and Africa, the intestinal environment may be more normal [80].

Previous meta-analysis have indicated that microbial therapy can effectively decrease TNF-α and hs-CRP levels [11, 24, 26, 81]. Consistently, our study demonstrated that it had a statistically significant effect on lowering TNF-α and hs-CRP. Another RCT involving 52 NAFLD patients found that taking synbiotic for 28 weeks can greatly decrease TNF-α and hs-CRP levels [82]. Clinical studies have also shown that almost all patients with NAFLD have abnormal levels of inflammatory cytokines, which trigger inflammatory response pathways in the NAFLD gut flora [83]. Microbial treatments may be a potential target for local mucosal inflammation, such as hs-CRP and TNF-α [84]. It has been established that supplementation with synbiotics can improve NAFLD by increasing SCFA synthesis and decreasing the expression of genes associated with inflammation [85]. SCFAs have anti-inflammatory effects by controlling the release of cytokines, reactive oxygen species (ROS), and immune cell chemotaxis [86]. Although we found that supplementation with synbiotics had an effective impact on reducing the TNF-α concentration, neither prebiotics nor probiotics had the same effect and further investigation is required to determine whether this is the result of a small sample effect.

There are several limitations to this study. First, there are no high-quality large RCTs, and there are currently few large-scale clinical trials of microbial therapy. Second, the microbiological distinctions between men and women may be influenced by sex hormones and chromosomes [87]. An earlier study hypothesized that the prevalence of NAFLD and obesity may be significantly influenced by sex-specific microbiomes [88]. However, the association between microbiota therapy and sexuality was not analyzed as too few studies were included; Third, due to the limited number of subgroup studies on inflammation factors that do not allow for verified method analysis, some indicators call for caution when concluding.

Conclusion

The meta-analysis revealed probiotics, prebiotics, and synbiotics supplementation may reduce BMI, liver injury, lipid profiles, and inflammatory factors in NAFLD patients. Of these, probiotics supplementation had an improving effect on liver injury, including hepatic fibrosis, AST, ALT, and ALP, and prebiotics supplementation had lower effect on TC, TG, and LDL-C. In the future, more researches, considering patients’ sex and stresses, should be undertaken on NAFLD patients under RCT design at numerous centers.