Erratum
After publication of the original article [1] the authors have brought to our attention that the following revisions had not been incorporated into the final published version.
In Definition 1 (Petri net): “E ⊆ ((P x T)∪(T x P))” is the set of directed edges not “E ⊆ ((P T) ∪ (T P))”. A segment of the Legend in Figure two: “A model of insulin receptor activation and recycling.” was incorrect and has been removed. The Legend of Figure three was incorrect and the correct legend is: “The model of insulin receptor recycling according to Figure 2 is represented as a Petri net. Places are drawn as circles and transitions as black squares.”
These mistakes have been updated in the original article as detailed in this erratum.
Reference
Balazki P, Lindauer K, Einloft J, Ackermann J, Aarum S, Koch I. MONALISA for stochastic simulations of Petri net models of biochemical systems. BMC Bioinformatics. 2015;16:215.
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Balazki, P., Lindauer, K., Einloft, J. et al. Erratum to: MONALISA for stochastic simulations of Petri net models of biochemical systems. BMC Bioinformatics 16, 371 (2015). https://doi.org/10.1186/s12859-015-0725-7
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DOI: https://doi.org/10.1186/s12859-015-0725-7