Abstract.
We introduce a path-sampling scheme that allows equilibrium state-ensemble averages to be computed by means of a biased distribution of non-equilibrium paths. This non-equilibrium method is applied to the case of the 38-atom Lennard-Jones atomic cluster, which has a double-funnel energy landscape. We calculate the free energy profile along the Q4 bond orientational order parameter. At high or moderate temperature the results obtained using the non-equilibrium approach are consistent with those obtained using conventional equilibrium methods, including parallel tempering and Wang-Landau Monte Carlo simulations. At lower temperatures, the non-equilibrium approach becomes more efficient in exploring the relevant inherent structures. In particular, the free energy agrees with the predictions of the harmonic superposition approximation.
Similar content being viewed by others
References
G.M. Torrie, J.P. Valleau, J. Comput. Phys. 23, 187 (1977)
B.A. Berg, T. Neuhaus, Phys. Lett. B 267, 249 (1991)
B.A. Berg, T. Neuhaus, Phys. Rev. Lett. 68, 9 (1992)
E. Marinari, G. Parisi, Europhys. Lett. 19, 451 (1992)
J. VandeVondele, U. Röthlisberger, J. Chem. Phys. 113, 4863 (2000)
F. Wang, D.P. Landau, Phys. Rev. Lett. 86, 2050 (2001)
F. Calvo, Molec. Phys. 100, 3421 (2003)
E.A. Carter, G. Ciccotti, J.T. Hynes, R. Kapral, Chem. Phys. Lett. 156, 472 (1989)
W. Watanabe, W.P. Reinhardt, Phys. Rev. Lett. 65, 3301 (1990)
C. Jarzynski, Phys. Rev. Lett. 78, 2690 (1997)
C. Dellago, P.G. Bolhuis, F.S. Csajka, D. Chandler, J. Chem. Phys. 108, 1964 (1998)
D.J. Wales, Molec. Phys. 100, 3285 (2002)
D.M. Ceperley, Rev. Mod. Phys. 67, 279 (1995)
P.A. Frantsuzov, V.A. Mandelshtam, J. Chem. Phys. 121, 9247 (2004)
M. Athènes, Eur. Phys. J. B 38, 651 (2004)
J.P.K. Doye, M.A. Miller, D.J. Wales, J. Chem. Phys. 110, 6896 (1999)
M.A. Miller, J.P.K. Doye, D.J. Wales, Phys. Rev. E 60, 3701 (1999)
D.J. Wales, Molec. Phys. 102, 891 (2004)
P.J. Steinhardt, D.R. Nelson, M. Ronchetti, Phys. Rev. B 28, 784 (1983)
G.J. Geyer, in Computing Science and Statistics: Proceedings of the 23rd Symposium on the Interface, edited by E.K. Keramidas (Interface Foundation, Fairfax Station, 1991), p. 156
J.P. Neirotti, F. Calvo, D.L. Freeman, J.D. Doll, J. Chem. Phys. 112, 10340 (2000); F. Calvo, J.P. Neirotti, D.L. Freeman, J.D. Doll, J. Chem. Phys. 112, 10350 (2000)
P. Poulain, F. Calvo, R. Antoine, M. Broyer, Ph. Dugourd, Phys. Rev. E 73, 056704 (2006)
D. Wu, D.A. Kofke, J. Chem. Phys. 122, 204104 (2005)
G. Adjanor, M. Athènes, J. Chem. Phys. 121, 234104 (2005)
D. Frenkel, B. Smit, Understanding molecular simulation, 2nd edn. (Academic Press, San Diego, 2003)
J.A. Siepmann, D. Frenkel, Molec. Phys. 75, 59 (1992)
G.N. Bochkov, Yu.E. Kuzovlev, J. Exp. Theor. Phys. 45, 125 (1978)
G.N. Bochkov, Yu.E. Kuzovlev, Physica A 106, 481 (1981)
G.E. Crooks, Phys. Rev. E 61, 2361 (2000)
J.P.K. Doye, D.J. Wales, Phys. Rev. Lett. 80, 1357 (1998); J.P.K. Doye, D.J. Wales, M.A. Miller, J. Chem. Phys. 109, 8143 (1998)
J. Jortner, Z. Phys. D: At. Mol. Clusters 24, 247 (1992)
D.J. Wales, Molec. Phys. 78, 151 (1993)
F. Calvo, J.P.K. Doye, D.J. Wales, Chem. Phys. Lett. 366, 176 (2002)
J.P.K. Doye, D.J. Wales, J. Chem. Phys. 102, 9659 (1995)
F. Calvo, J.P.K. Doye, D.J. Wales, J. Chem. Phys. 115, 9627 (2001)
F.H. Stillinger, Phys. Rev. E 59, 48 (1999)
D.J. Wales, Energy Landscapes (Cambridge University Press, Cambridge, 2003)
F. Calvo, J. Chem. Phys. 123, 124106 (2005)
T.V. Bogdan, D.J. Wales, F. Calvo, J. Chem. Phys. 124, 044102 (2006)
C. Dellago, P.G. Bolhuis, P. Geissler, Adv. Chem. Phys. 123, 1 (2002)
M. Athènes, Phys. Rev. E 64, 046705 (2002)
F. Calvo, J.P.K. Doye, Phys. Rev. E 63, 010902 (2000)
Y. Sugita, A. Kitao, Y. Okamoto, J. Chem. Phys. 113, 6042 (2000)
Y. Sugita, Y. Okamoto, Chem. Phys. Lett. 329, 261 (2000)
R. Faller, Q. Yan, J.J. de Pablo, J. Chem. Phys. 116, 5419 (2002)
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Adjanor, G., Athènes, M. & Calvo, F. Free energy landscape from path-sampling: application to the structural transition in LJ38 . Eur. Phys. J. B 53, 47–60 (2006). https://doi.org/10.1140/epjb/e2006-00353-0
Received:
Published:
Issue Date:
DOI: https://doi.org/10.1140/epjb/e2006-00353-0