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Diversity of cultured aerobic organisms in the areas of natural oil seepage on Lake Baikal

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Abstract

The diversity of cultured aerobic organisms collected from water samples and bottom sediment from two areas of natural oil seepage on Lake Baikal has been researched. Representatives of Alpha-, Beta-, and Gammaproteobacteria have been found in samples collected near the Bol’shaya Zelenovskaya River mouth, while near Cape Gorevoi Utes Betaproteobacteria were absent. Most cultures are characterized by a sufficiently high homology level (96–100%) with nucleotide sequences from the international database.

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References

  • Amann, R.I., Stromley, J., Devereux, R., et al., Molecular and Microscopic Identification of Sulfate-Reducing Bacteria in Multispecies Biofilms, Appl. Environ. Microbiol., 1992, vol. 58, no. 2, pp. 614–623.

    PubMed  CAS  Google Scholar 

  • Baryshnikova, L.M., Grishchenkov, V.G., Arinbasarov, M.U., et al., Biodegradation of Oil Products by Individual Degrading Strains and Their Associations in Liquid Media, Prikl. Biokhim. Mikrobiol., 2001, vol. 37, no. 5, pp. 542–548.

    PubMed  CAS  Google Scholar 

  • Bel’kova, N.L., Taxonomic Diversity of Microbial Community of Water Column of Lake Baikal, Extended Abstract of Cand. Sci. (Biol.) Dissertation, Vladivostok: DVGU, 2004.

    Google Scholar 

  • Borzenkov, I.A., Milekhina, E.I., Gotoeva, M.T., et al., The Properties of Hydrocarbon-Oxidizing Bacteria Isolated from the Oilfields of Tatarstan, Western Siberia, and Vietnam, Mikrobiologiya, 2006, vol. 75, no. 1, pp. 82–89.

    CAS  Google Scholar 

  • Dyksterhouse, S.E., Gray, J.P., Herwig, R.P., et al., Cycloclasticus pugetii gen. nov., An Aromatic Hydrocarbon-Degrading Bacterium from Marine Sediment, Int. J. Syst. Bacteriol., 1995, vol. 45, pp. 116–123.

    Article  PubMed  CAS  Google Scholar 

  • Goebel, B.M. and Stackebrandt, E., Cultural and Phylogenetic Analysis of Mixed Microbial Populations Found in Natural and Commercial Bioleaching Environments, Appl. Environ. Microbiol., 1994, vol. 60, no. 5, pp. 1614–1621.

    PubMed  CAS  Google Scholar 

  • Golyshin, P.N., Chernikova, T.N., Abraham, W.R., et al., Oleiphilaceae fam. nov., to Include Oleiphilus messinensis gen. nov., sp. nov., a Novel Marine Bacterium That Obligately Utilizes Hydrocarbons, Int. J. Syst. Evol. Microbiol., 2002, vol. 52, pp. 901–911.

    Article  PubMed  CAS  Google Scholar 

  • Head, I.M., Jones, D.M., and Roling, F.M., Marine Microorganisms Make a Meal of Oil, Nature, 2006, vol. 4, pp. 173–182.

    CAS  Google Scholar 

  • Isaev, V.P., Primina, S.P., and Shiribon, A.A., Problem of Petroleum Potential of Lake Baikal and Ust’-Selenga Depression, in Mater. Nauch.-Prakt. Soveshch. (Proc. Sci.-Pract. Conf.), Ulan-Ude: Izd. Buryat. Nauch. Tsentra Sib. Otd. Ros. Akad. Nauk, 2003, pp. 43–48.

    Google Scholar 

  • Kashirtsev, V.A., Kontorovich, A.E., Filp, R.P., et al., Biomarkers in Oil-Bearing Eastern Areas of the Siberian Platform as Indicators of Conditions of Formation of Oil-Producing Sediments, Geol. Geofiz., 1999, vol. 40, no. 11, pp. 1700–1710.

    CAS  Google Scholar 

  • Khlystov, O.M., Gorshkov, A.G., Egorov, A.V., et al., Oil in the Lake of World Heritage, Dokl. Akad. Nauk, 2007, vol. 414, no. 5, pp. 656–659.

    Google Scholar 

  • Kontorovich, A.E., Kashirtsev, V.A., Moskvin, V.I., et al., Petroleum Potential of Sediments of Lake Baikal, Geol. Geofiz., 2007, vol. 48, no. 12, pp. 1346–1356.

    CAS  Google Scholar 

  • Leahy, J.G. and Colwell, R.R., Microbial Degradation of Hydrocarbons in the Environment, Microbiol. Rev., 1990, vol. 54, pp. 305–315.

    PubMed  CAS  Google Scholar 

  • Nazina, T.I. and Grigor’yan, A.A., Syue Yan-Fen., et al. Phylogenetic Diversity of Aerobic Saprotrophic Bacteria Isolated from the Daqing Oil Field, Mikrobiologiya, 2002, vol. 71, no. 1, pp. 103–110.

    CAS  Google Scholar 

  • Nazina, T.I., Sokolova, D.Sh., Shestakova, N.M., et al., The Phylogenetic Diversity of Aerobic Organotrophic Bacteria from the Dagang High-Temperature Oil Field, Mikrobiologiya, 2005, vol. 74, no. 3, pp. 401–409.

    CAS  Google Scholar 

  • Parfenova, V.V., Bel’kova, N.L., Denisova, L.Ya., et al., Study of Species Composition of Cultivated Heterotrophic Microorganisms of Lake Baikal, Biol. Vnutr. Vod, 2006, no. 1, pp. 8–15.

  • Pavlova, O.N., Zemskaya, T.I., Gorshkov, A.G., et al., Comparative Characterization of Microbial Communities in Two Regions of Natural Oil Seepage in Lake Baikal, Izv. Akad. Nauk, Ser. Biol., 2008, vol. 35, no. 3, pp. 1–8.

    Google Scholar 

  • Raymond, R.L., Microbial Oxidation of N-Paraffinic Hydrocarbons, Develop. Industry Microbiol, 1961, vol. 2, no. 1, pp. 23–32.

    CAS  Google Scholar 

  • Rochelle, P.A., DNA Extraction for 16S RRNA Gene Analysis to Determine Genetic Diversity in Deep Sediment Communities, FEMS Microbiol. Letts., 1992, vol. 100, pp. 59–66.

    Article  CAS  Google Scholar 

  • Rodina, A.G., Metody vodnoi mikrobiologii (Methods of Aquatic Microbiology), Moscow: Nauka, 1965.

    Google Scholar 

  • Romanenko, V.I. and Kuznetsov, S.I., Ekologiya mikroorganizmov presnykh vodoemov (Ecology of Freshwater Microorganisms), Moscow: Nauka, 1974.

    Google Scholar 

  • Rozanova, E.P. and Kuznetsov, S.I., Mikroflora neftyanykh mestorozhdenii (Microflora of Oil Deposits), Moscow: Nauka, 1974.

    Google Scholar 

  • Ryazanov, V.D., Ozokerite and Oil Deposits in Cisbaikalia, in Mater. Soveshch. po geologii i poleznym iskopaemym Dal’nego Vostoka (Proc. Conf. on Geology and Mineral Resources of the Far East), Vladivostok: Izd. Dal’nevost. Univ., 1928, issue 19, pp. 24–32.

    Google Scholar 

  • Sohngen, N.L., Benzin, Petroleum, Paraffin Als Kohlenstoffund Energiequelle fur Microben, Zentraibl. Bacteriol. Parasitenkd. Infektionskr. Hyg. Abt., 1913, vol. 37, pp. 595–609.

    CAS  Google Scholar 

  • Yakimov, M.M., Giuliano, L., Denaro, R., et al., Thalassolituus oleivorans gen. nov., sp. nov., a Novel Marine Bacterium That Obligately Utilizes Hydrocarbons, Int. J. Syst. Evol. Microbiol. 2004, vol. 54, pp. 141–148.

    Article  PubMed  CAS  Google Scholar 

  • Yakimov, M.M., Golyshin, P.N., Lang, S., et al., lcanivorax borkumensis gen. nov., sp. nov., a New, Hydrocarbon-Degrading and Surfactant-Producing Marine Bacterium, Int. J. Syst. Bacteriol., 1998, vol. 48, pp. 339–348.

    PubMed  CAS  Google Scholar 

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Correspondence to A. V. Lomakina.

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Original Russian Text © A.V. Lomakina, O.N. Pavlova, O.V. Shubenkova, T.I. Zemskaya, 2009, published in Izvestiya Akademii Nauk, Seriya Biologicheskaya, 2009, No. 5, pp. 515–522.

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Lomakina, A.V., Pavlova, O.N., Shubenkova, O.V. et al. Diversity of cultured aerobic organisms in the areas of natural oil seepage on Lake Baikal. Biol Bull Russ Acad Sci 36, 430–436 (2009). https://doi.org/10.1134/S1062359009050021

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