Skip to main content
Log in

Structure and Forming of Mitochondrial Gene Pool of Russian Population of Eastern Europe

  • HUMAN GENETICS
  • Published:
Russian Journal of Genetics Aims and scope Submit manuscript

Abstract

Phylogeographic analysis of the variability of whole mitochondrial genomes in the Russian populations of Eastern Europe (n = 557) showed that, in the Russian mitochondrial gene pool, there were subgroups of mtDNA characteristic only of Russians and other Eastern Slavs (11.7%), as well as of Slavs as a whole (12.2%), Slavs and Germans (6.6%), and Slavs and Baltic Finns (5.7%). The results of molecular dating suggest that the mitochondrial subgroups characteristic of Russians and Slavs in general began to arise 2700–3500 years ago. The results of the study of the dynamics of the effective population size based on the Bayesian analysis of data on the variability of mtDNA haplotypes specific to Russians and Slavs showed that a rapid increase in population sizes occurred immediately after its decline 4000–5000 years ago. The data obtained are discussed in comparison with the results of the analysis of Y-chromosome polymorphism in European populations.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1.

Similar content being viewed by others

REFERENCES

  1. Malyarchuk, B., Litvinov, A., Derenko, M., et al., Mitogenomic diversity in Russians and Poles, Forensic Sci. Int.: Genet., 2017, vol. 30, pp. 51—56. https://doi.org/10.1016/j.fsigen.2017.06.003

    Article  CAS  Google Scholar 

  2. Malyarchuk, B.A., Derenko, M.V., and Litvinov, A.N., The macrohaplogroup U structure in Russians, Russ. J. Genet., 2017, vol. 53, no. 4, pp. 498—503. https://doi.org/10.1134/S1022795417020053

    Article  CAS  Google Scholar 

  3. Malyarchuk, B., Derenko, M., Grzybowski, T., et al., Differentiation of mitochondrial DNA and Y chromosomes in Russian populations, Hum. Biol., 2004, vol. 76, pp. 877—900.

    Article  PubMed  Google Scholar 

  4. Morozova, I., Evsyukov, A., Kon’kov, A., et al., Russian ethnic history inferred from mitochondrial DNA diversity, Am. J. Phys. Anthropol., 2012, vol. 147, pp. 341—351. https://doi.org/10.1002/ajpa.21649

    Article  PubMed  Google Scholar 

  5. Kushniarevich, A., Utevska, O., Chuhryaeva, M., et al., Genetic heritage of the Balto-Slavic speaking populations: a synthesis of autosomal, mitochondrial and Y-chromosomal data, PLoS One, 2015, vol. 10. e0135820. https://doi.org/10.1371/journal.pone.0135820

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  6. Gimbutas, M., The Prehistory of Eastern Europe, part 1: Mesolithic, Neolithic and Copper Age Cultures in Russia and the Baltic Area, Cambridge: The Peabody Museum, 1956.

  7. Allentoft, M.E., Sikora, M., Sjogren, K.G., et al., Population genomics of Bronze Age Eurasia, Nature, 2015, vol. 522, pp. 167—172. https://doi.org/10.1038/nature14507

    Article  CAS  PubMed  Google Scholar 

  8. Haak, W., Lazarids, I., Patterson, N., et al., Massive migration from the steppe was a source for Indo-European languages in Europe, Nature, 2015, vol. 522, pp. 207—211. https://doi.org/10.1038/nature14317

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  9. Malyarchuk, B.A., Grzybowski, T., Derenko, M., et al., Mitochondrial DNA phylogeny in Eastern and Western Slavs, Mol. Biol. Evol., 2008, vol. 25, no. 8, pp. 1651—1658. https://doi.org/10.1093/molbev/msn114

    Article  CAS  PubMed  Google Scholar 

  10. Malyarchuk, B., Derenko, M., Grzybowski, T., et al., The peopling of Europe from the mitochondrial haplogroup U5 perspective, PLoS One, 2010, vol. 5. e10285. https://doi.org/10.1371/journal.pone.0010285

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  11. Derenko, M., Malyarchuk, B., Denisova, G., et al., Western Eurasian ancestry in modern Siberians based on mitogenomic data, BMC Evol. Biol., 2014, vol. 14, p. 217. https://doi.org/10.1186/s12862-014-0217-9

    Article  PubMed  PubMed Central  Google Scholar 

  12. Bandelt, H.J., Forster, P., and Röhl, A., Median-joining networks for inferring intraspecific phylogenies, Mol. Biol. Evol., 1999, vol. 16, pp. 37—48. https://doi.org/10.1093/oxfordjournals.molbev.a026036

    Article  CAS  PubMed  Google Scholar 

  13. Soares, P., Ermini, L., Thomson, N., et al., Correcting for purifying selection: an improved human mitochondrial molecular clock, Am. J. Hum. Genet., 2009, vol. 84, pp. 740—759. https://doi.org/10.1016/j.ajhg.2009.05.001

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  14. Perego, U.A., Achilli, A., Angerhofer, N., et al., Distinctive Paleo-Indian migration routes from Beringia marked by two rare mtDNA haplogroups, Curr. Biol., 2009, vol. 19, pp. 1—8. https://doi.org/10.1016/j.cub.2008.11.058

    Article  CAS  PubMed  Google Scholar 

  15. Översti, S., Onkamo, P., Stoljarova, M., et al., Identification and analysis of mtDNA genomes attributed to Finns reveal long-stagnant demographic trends obscured in the total diversity, Sci. Rep., 2017, vol. 7. 6193. https://doi.org/10.1038/s41598-017-05673-7

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  16. Drummond, A.J., Suchard, M.A., Xie, D., et al., Bayesian phylogenetics with BEAUti and the BEAST 1.7, Mol. Biol. Evol., 2012, vol. 29, pp. 1969—1973. https://doi.org/10.1093/molbev/mss075

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  17. Tamura, K., Peterson, D., Peterson, N., et al., MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods, Mol. Biol. Evol., 2011, vol. 28, pp. 2731—2739. https://doi.org/10.1093/molbev/msr121

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  18. Peter, B.M., Wegmann, D., and Excoffier, L., Distinguishing between population bottleneck and population subdivision by a Bayesian model choice procedure, Mol. Ecol., 2010, vol. 19, pp. 4648—4860. https://doi.org/10.1111/j.1365-294X.2010.04783.x

    Article  PubMed  Google Scholar 

  19. Heller, R., Chikhi, L., and Siegismund, H.R., The confounding effect of population structure on Bayesian skyline plot inferences of demographic history, PLoS One, 2013, vol. 8. e62992. https://doi.org/10.1371/journal.pone.0062992

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  20. Mazet, O., Rodríguez, W., Grusea, S., et al., On the importance of being structured: instantaneous coalescence rates and human evolution—lessons for ancestral population size inference?, Heredity (Edinburgh), 2016, vol. 116, pp. 362—371. https://doi.org/10.1038/hdy.2015.104

    Article  CAS  PubMed  Google Scholar 

  21. Lippold, S., Xu, H., Ko, A., et al., Human paternal and maternal demographic histories: insights from high-resolution Y chromosome and mtDNA sequences, Invest. Genet., 2014, vol. 5. 13. https://doi.org/10.1186/2041-2223-5-13

    Article  Google Scholar 

  22. Karmin, M., Saag, L., Vicente, M., et al., A recent bottleneck of Y chromosome diversity coincides with a global change in culture, Genome Res., 2015, vol. 25, pp. 459—466. https://doi.org/10.1101/gr.186684.114

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  23. Batini, C., Hallast, P., Vågene, Å.J., et al., Population resequencing of European mitochondrial genomes highlights sex-bias in Bronze Age demographic expansions, Sci. Rep., 2017, vol. 7. 12086. https://doi.org/10.1038/s41598-017-11307-9

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  24. Batini, C., Hallast, P., Zadik, D., et al., Large-scale recent expansion of European patrilineages shown by population resequencing, Nat. Commun., 2015, vol. 6. 7152. https://doi.org/10.1038/ncomms8152

    Article  CAS  PubMed  PubMed Central  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to B. A. Malyarchuk.

Additional information

Translated by A. Kazantseva

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Malyarchuk, B.A., Litvinov, A.N. & Derenko, M.V. Structure and Forming of Mitochondrial Gene Pool of Russian Population of Eastern Europe. Russ J Genet 55, 622–629 (2019). https://doi.org/10.1134/S1022795419050107

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1134/S1022795419050107

Keywords:

Navigation