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Ribosomal genes in the human genome: Identification of four fractions, their organization in the nucleolus and metaphase chromosomes

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Abstract

Completion of human genome reading stimulated intense studies in the field of functional genomics and characterization of individual genomes. Of considerable importance is the study of the complex of multicopy ribosomal genes (RGs), but its thorough analysis was not a task of the “Human Genome” program. In this short review we present our data on the copy number of rRNA genes in individual human genomes and on their heterogeneity in the functional respect. Fractions of active and potentially active RGs as well as fractions of inactive and silent RGs intensively methylated in the transcribed region are characterized. Their location in the nucleolus structures and in metaphase chromosomes is discussed.

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References

  1. Veiko, N.N., Structural and Functional Organization of Human Ribosomal Repeats, Doctoral (Biol.) Dissertation, Moscow: RCMG RAMS., 2001, p. 258.

    Google Scholar 

  2. Veiko, N.N., Lyapunova, N.A., Bogush, A.I., et al., Ribosomal Gene Number in Individual Human Genomes: Data from Comparative Molecular and Cytogenetic Analysis, Mol. Biol. (Moscow), 1996, vol. 30, no. 5, suppl. 1, pp. 641–647.

    Google Scholar 

  3. Veiko, N.N., Egolina, N.A., Radzivil, G.G, et al., Quantitation of Repetitive Sequences in Human Genomic DNA and Detection of an Elevated Ribosomal Repeat Copy Number in Schizophrenia: The Results of Molecular and Cytogenetic Analyses, Mol. Biol. (Moscow), 2003, vol. 37, no. 3, pp. 349–357.

    Article  CAS  Google Scholar 

  4. Conconi, A., Widmer, R.M., Koller, Th., and Sogo, J.M., Two Different Chromatin Structures Coexist in Ribosomal RNA Genes throughout the Cell Cycle, Cell, 1989, vol. 57, no. 5, pp. 753–761.

    Article  CAS  PubMed  Google Scholar 

  5. Veiko, N.N., Lyapunova, N.A., Kosyakova, N.V., and Spitkovskii, D.M., Variation in Chromatin Structure of the rDNA Transcribed Region in Human Peripheral Blood Lymphocytes, Mol. Biol. (Moscow), 2001, vol. 35, no. 1, pp. 45–55.

    Article  CAS  Google Scholar 

  6. Lyapunova, N.A., Kravets-Mandron, I.A., and Tsvetkova, T.G., Cytogenetics of the Nucleolus Organizer Regions (NORs) of Human Chromosomes: The Identification, Individual Variation, and Chromosome Distribution of Four Morphological Functional Variants of NORs, Russ. J. Genet., 1998, vol. 34, no. 9, pp. 1095–1102.

    CAS  Google Scholar 

  7. Lyapunova, N.A., Egolina, N.A., Tsvetkova, T.G., et al., Nucleolus Organizer Regions of Human Chromosomes: Experience of Quantitative Cytogenetic and Molecular Analysis, Biol. Membrany Kletki (Moscow), 2001, vol. 18, no. 3, pp. 189–199.

    CAS  Google Scholar 

  8. Malinovskaya, E.M., Smirnova, T.D., Egolina, N.A., et al., Changes in Human Ribosomal Genes Ensemble with Ageing, Med. Genet. (Moscow), 2008, vol. 7, no. 2, pp. 10–16.

    CAS  Google Scholar 

  9. Sirri, V., Urcuqui-Inchima, S., Roussel, P., and Hernandez-Verdun, D., Nucleolus: The Fascinating Nuclear Body, Histochem. Cell Biol., 2008, vol. 129, pp. 13–31.

    Article  CAS  PubMed  Google Scholar 

  10. Veiko, N.N., Lyapunova, N.A., Bogush, A.I., and Spitkovskii, D.M., Proteins Are Tightly Bound with Transcribed Regions of Human Ribosomal Genes, Mol. Biol. (Moscow), 1998, vol. 32, no. 4, pp. 518–522.

    CAS  Google Scholar 

  11. Veiko, N.N., Lyapunova, N.A., Kovalev, L.I., et al., Proteins Tightly Bound with rDNA Transcribed Regions in Nuclei, Nucleoids, and Nucleoproteins of Human Lymphocytes: Isolation and Characterization of Candidate Proteins, Mol. Biol. (Moscow), 2000, vol. 34, no. 2, pp. 250–255.

    Article  CAS  Google Scholar 

  12. Veiko, N.N., Kovalev, L.I., Lyapunova, N.A., and Spitkovskii, D.M., Content of Proteins Tightly Bound with rDNA Transcribed Regions in Human Genome Varies in Different Cells and Probably Correlates with Their Physiological Activity, in Genom cheloveka (Human Genome), Collection of Reports of Scientific Council, 2000, Moscow, 2001, pp. 13–14.

  13. Gustafson, T.A., Taylor, A., and Kedes, L., DNA Bending Is Induced Transcription Factor That Interacts with the Human c-FOS and α-Actin Promoters, Proc. Natl. Acad. Sci. USA, 1989, vol. 86, pp. 2162–2166.

    Article  CAS  PubMed  Google Scholar 

  14. Heliot, L., Kaplan, H., Lucas, L., et al., Electron Tomography of Metaphase Nucleolar Organizer Regions: Evidence for a Twisted-Loop Organization, Mol. Biol. Cell, 1997, vol. 8, pp. 2199–2216.

    CAS  PubMed  Google Scholar 

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Correspondence to N. A. Lyapunova.

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Original Russian Text © N.A. Lyapunova, N.N. Veiko, 2010, published in Genetika, 2010, Vol. 46, No. 9, pp. 1205–1209.

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Lyapunova, N.A., Veiko, N.N. Ribosomal genes in the human genome: Identification of four fractions, their organization in the nucleolus and metaphase chromosomes. Russ J Genet 46, 1070–1073 (2010). https://doi.org/10.1134/S1022795410090140

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  • DOI: https://doi.org/10.1134/S1022795410090140

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