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Identification of the di-n-butyl phthalate-biodegrading strains and the biodegradation pathway in strain LMB-1

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Abstract

DNA isolated from a greenhouse soil (Nanjing, Jiangsu Province, China) was suitable for PCR amplification of gene segment coding for the 16S rRNA. Diverse PCR products were characterized by cloning and sequencing, and analysis of bacterial colonies showed the presence over 26 phyla. The most bacteria belonged to Proteobacteria, Actinobacteria, Gemmatimonadetes, Acidobacteria and Planctomycetes. Furthermore, after the enrichment procedure of DBP-degrading microorganisms, 4 strains were isolated from the soil sample with di-n-butyl phthalate (DBP) biodegradability, and they were identified to be Rhizobium sp., Streptomyces sp., Pseudomonas sp. and Acinetobacter sp. Analysis of the degradation products by LC-MS led to identification of metabolites of DBP in strain LMB-1 (identified as Rhizobium sp.) which suggests that DBP was degraded through β-oxidation, demethylation, de-esterification and cleavage of aromatic ring.

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References

  1. Wang, Y.N., Ying Yong Sheng Tai Xue Bao, 2014, vol. 25, no. 4, pp. 1115–1124.

    CAS  PubMed  Google Scholar 

  2. Wang, Y., Fan, Y., and Gu, J.D., Int. Biodet. Biodegrad., 2004, vol. 53, no. 2, pp. 93–101.

    Article  CAS  Google Scholar 

  3. Li, J.X., Gu, J.D., and Yao, J.H., Int. Biodet. Biodegrad., 2005, vol. 56, no. 3, pp. 158–165.

    Article  CAS  Google Scholar 

  4. Jin, D., Kong, X., Cui, B., Bai, Z., and Zhang, H., Int. J. Mol. Sci., 2013, vol. 14, no. 12, pp. 24046–24054.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  5. Chatterjee, S. and Dutta, T.K., Biochem. Biophys. Res. Commun., 2003, vol. 309, no.1, pp. 36–43.

    Article  CAS  PubMed  Google Scholar 

  6. Li, J. and Gu, J.D., Ecotoxicology, 2006, vol. 15, no. 4, pp. 391–397.

    Article  CAS  PubMed  Google Scholar 

  7. Li, J. and Gu, J.D., Sci. Total Environ., 2007, vol. 380, nos. 1–3, pp. 181–187.

    Article  CAS  PubMed  Google Scholar 

  8. Schloss, P.D., Westcott, S.L., Ryabin, T., Hall, J.R., Hartmann, M., Hollister, E.B., and Sahl, J.W., Appl. Environ. Microbiol., 2009, vol. 75, no. 23, pp. 7537–7541.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  9. Li, W., Bioinformatics, 2006, vol. 22, no. 13, pp. 1658–1659.

    Article  CAS  PubMed  Google Scholar 

  10. Chao, A. and Lee, S.M., J. Am. Stat. Assoc., 1992, vol. 87, pp. 210–217.

    Article  Google Scholar 

  11. Wu, X., Liang, R., Dai, Q., Jin, D., Wang, Y., and Chao, W., J. Hazard. Mater., 2010, vol. 176, nos. 1–3, pp. 262–268.

    Article  CAS  PubMed  Google Scholar 

  12. Wu, Q., Liu, H., Ye, L.S., Li, P., and Wang, Y.H., Int. Biodeterior. Biodegrad., 2013, vol. 76, pp. 102–107.

    Article  CAS  Google Scholar 

  13. Li, J., Cai, W., and Cai, J., J. Hazard. Mater., 2009, vol. 165, no. 1–3, pp. 950–954.

    Article  CAS  PubMed  Google Scholar 

  14. Haddadi, A. and Shavandi, M., Int. Biodeterior. Biodegrad., 2013, vol. 85, pp. 29–34.

    Article  CAS  Google Scholar 

  15. Aukema, K.G., Kasinkas, L., Aksan, A., and Wackett, L.P., Appl. Environ. Microbiol., 2014, vol. 80, no. 16, pp. 4968–4976.

    Article  PubMed  PubMed Central  Google Scholar 

  16. Fida, T.T., Palamuru, S., Pandey, G., and Spain, J.C., Appl. Environ. Microbiol., 2014, vol. 80, no. 24, pp. 7725–7731.

    Article  PubMed  PubMed Central  Google Scholar 

  17. Aburto-Medina, A., Adetutu, E.M., Aleer, S., Weber, J., Patil, S.S., Sheppard, P.J., and Juhasz, A.L., Biodegradation, 2012, vol. 23, no. 6, pp. 813–822.

    Article  CAS  PubMed  Google Scholar 

  18. Maeda, A.H., Nishi, S., Hatada, Y., Ozeki, Y., and Kanaly, R.A., Microb. Biotechnol., 2014, vol. 7, no. 2, pp. 114–129.

    Article  CAS  PubMed  Google Scholar 

  19. Luo, Q., Shen, X.R., Zhang, J.G., Fan, Z.Q., and He, Y., Afric. J. Microbiol. Res., 2012, vol. 6, no. 5, pp. 1033–1040.

    CAS  Google Scholar 

  20. Jiang, L., Ruan, Q., Li, R., and Li, T., J. Basic Microbiol., 2013, vol. 53, no. 3, pp. 224–230.

    Article  CAS  PubMed  Google Scholar 

  21. Ebrahimi, P. and Plettner, E., Biodegradation, 2014, vol. 25, no. 1, pp. 31–39.

    Article  CAS  PubMed  Google Scholar 

  22. Liang, L., Song, X., Kong, J., Shen, C., Huang, T., and Hu, Z., Biodegradation, 2014, vol. 25, no. 6, pp. 825–833.

    Article  CAS  PubMed  Google Scholar 

  23. Dong, W., Jiang, S., Shi, K., Wang, F., Li, S., Zhou, J., and Huang, Y., Bioresour. Technol., 2015, vol. 186, pp. 114–121.

    Article  CAS  PubMed  Google Scholar 

  24. Balachandran, C., Duraipandiyan, V., Balakrishna, K., and Ignacimuthu, S., Bioresour. Technol., 2012, vol. 112, pp. 83–90.

    Article  CAS  PubMed  Google Scholar 

  25. Ma, J., Xu, L., and Jia, L., Bioresour. Technol., 2013, vol. 140, pp. 15–21.

    Article  CAS  PubMed  Google Scholar 

  26. Krizova, L., Maixnerova, M., Sedo, O., and Nemec, A., Syst. Appl. Microbiol., 2014, vol. 37, no. 7, pp. 467–473.

    Article  PubMed  Google Scholar 

  27. Liao, C.S., Chen, L.C., Chen, B.S., and Lin, S.H., Chemosphere, 2010, vol. 78, no. 3, pp. 342–346.

    Article  CAS  PubMed  Google Scholar 

  28. Wu, X., Wang, Y., Liang, R., Dai, Q., Jin, D., and Chao, W., Process Biochem., 2011, vol. 46, no. 5, pp. 1090–1094.

    Article  CAS  Google Scholar 

  29. Cartwright, C.D., Owen, S.A., Thompson, I.P., and Burns, R.G., FEMS Microbiol. Lett., 2000, vol. 186, no. 1, pp. 27–34.

    Article  CAS  PubMed  Google Scholar 

  30. Amir, S., Hafidi, M., Merlina, G., Hamdi, H., Jouraiphy, A., El Gharous, M., and Revel, J.C., Process Biochem., 2005, vol. 40, no. 6, pp. 2183–2190.

    Article  CAS  Google Scholar 

  31. Xu, X.R., Li, H.B., and Gu, J.D., Int. Biodeterior. Biodegrad., 2005, vol. 55, no. 1, pp. 9–15.

    Article  CAS  Google Scholar 

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Correspondence to Y. Zhou.

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Fang, Y., Zhang, LS., Wang, J. et al. Identification of the di-n-butyl phthalate-biodegrading strains and the biodegradation pathway in strain LMB-1. Appl Biochem Microbiol 53, 310–317 (2017). https://doi.org/10.1134/S000368381703005X

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  • DOI: https://doi.org/10.1134/S000368381703005X

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