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Differentiation of the Dolly Varden Char (Salvelinus malma) and the Taranetz Char (Salvelinus taranetzi) Inferred from the PCR–RFLP Analysis of Mitochondrial DNA

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Abstract

Genetic differentiation of two sympatric char species, the Dolly Varden char (Salvelinus malma Walbaum) and the Taranetz char (S. taranetzi Kaganovski), has been studied. Restriction fragment length polymorphism (RFLP) analysis has been used to compare three mitochondrial DNA (mtDNA) fragments (ND1/ND2, ND5/ND6, and Cytb/D-loop) amplified via polymerase chain reaction (PCR). The divergence between S. malma and S. taranetzi inferred from mtDNA nucleotide sequences is 2.8%; between S. leucomaenis and S. taranetzi, 7.1%; and between S. malma and S. leucomaenis, 7.5%. The absence of common haplotypes and the degree of divergence indicate that the Dolly Varden char and the Taranetz char are genetically isolated and confirm that S. taranetzimay be regarded as a separate species.

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REFERENCES

  1. Chereshnev, I.A., To the Taxonomic Status of Sympatric Migrant Char of the Genus Salvelinus (Salmonidae) from Eastern Chukotka, Vopr. Ikhtiol., 1982, vol. 22,no. 6, pp. 922-936.

    Google Scholar 

  2. Chereshnev, I.A., An Annotated List of Arctic Freshwater Fish Species, Vopr. Ikhtiol., 1996, vol. 36,no. 5, pp. 597-608.

    Google Scholar 

  3. Chereshnev, I.A., Volobuev, V.V., Shestakov, A.V., and Frolov, S.V., Lososevidnye ryby Severo-Vostoka Rossii (Salmoniformes of Northeastern Russia), Vladivostok: Dal'nauka, 2002.

    Google Scholar 

  4. Glubokovsky, M.K., Evolyutsionnaya biologiya lososevykh ryb (Evolutionary Biology of Salmonids), Moscow: Nauka, 1995.

    Google Scholar 

  5. Savvaitova, K.A., Arkticheskie gol'tsy (struktura populyatsionnykh sistem, perspectivy khozyaistvennogo ispol'zovaniya) (Arctic Chars: Structure of Population Systems and Perspectives of Commercial Use), Moscow: Agropromizdat, 1989.

    Google Scholar 

  6. Benhke, R.J., Interpreting the Phylogeny of Salvelinus, Physiol. Ecol. Jpn., 1989, vol. 1, pp. 35-48.

    Google Scholar 

  7. Salmenkova, E.A., Omelchenko, V.T., Kolesnikov, A.A., and Malinina, T.V., Genetic Differentiation of Chars in the Russian North and Far East, J. Fish Biol., 2000, vol. 57,suppl. A, pp. 136-157.

    Google Scholar 

  8. Gudkov, P.V., On Several Specific Biological Features of Taranetz Char Salvelinus taranetzi from the Achchen Lake, Vopr. Ikhtiol., 1994, vol. 34,no. 1, pp. 58-63.

    Google Scholar 

  9. Frolov, S.V., Karyotype Divergence in Char of the Genus Salvelinus from Chukotka, Dokl. Akad. Nauk, 1997, vol. 357,no. 5, pp. 703-705.

    Google Scholar 

  10. Omel'chenko, V.T., Salmenkova, E.A., Malinina, T.V., and Frolov, S.V., Genetic Differentiation of Sympatric Populations of Chars of the Genus Salvelinus from the Achchen Lake (Chukotka), Genetika (Moscow), 1998, vol. 34,no. 3, pp. 399-405.

    Google Scholar 

  11. Radchenko, O.A. and Malyarchuk, B.A., Genetic Differentiation of the Dolly Varden Char and Taranetz Char Populations Based on Restriction Endonuclease Analysis of the Cytochrome b Gene, Genetika (Moscow), 1999, vol. 35,no. 8, pp. 1104-1108.

    Google Scholar 

  12. Radchenko, O.A., Derenko, M.V., and Malyarchuk, B.A., Sequence Variability of the Mitochondrial DNA Cytochrome b Gene in Dolly Varden Char and Taranetz Char, Genetika (Moscow), 2000, vol. 36,no. 7, pp. 908-914.

    Google Scholar 

  13. Radchenko, O.A. and Malyarchuk, B.A., Comparative Restriction Enzyme Analysis of Mitochondrial DNA in Populations of Dolly Varden Char Salvelinus malma Walbaum and Taranetz Char S. taranetzi Kaganovsky, Vopr. Ikhtiol., 2000, vol. 40,no. 2, pp. 256-262.

    Google Scholar 

  14. Brunner, P.C., Douglas, M.R., Osinov, A., et al., Holarctic Phylogeography of Arctic Char (Salvelinus alpinus L.) Inferred from Mitochondrial DNA Sequences, Evolution, 2001, vol. 55,no. 3, pp. 573-586.

    Google Scholar 

  15. Sambrook, J., Fritsch, E.F., and Maniatis, T., Molecular Cloning: A Laboratory Manual, Cold Spring Harbor, New York: Cold Spring Harbor Lab., 1989.

    Google Scholar 

  16. Gharrett, A.J., Gray, A.K., and Brykov, V.A., Mitochondrial DNA Variation in Alaskan Coho Salmon, Onchorhynchus kisutch, Fish. Bull., 2001, vol. 99, pp. 528-544.

    Google Scholar 

  17. McElroy, D., Moran, P., Bermingham, E., and Kornfield, I., REAP: An Integrated Environment for the Manipulation and Phylogenetic Analysis of Restriction Data, J. Hered., 1992, vol. 83, pp. 153-158.

    Google Scholar 

  18. Sneath, P.H.A. and Sokal, R.P., Numerical Taxonomy: The Principles and Practice of Numerical Classification, San Francisco: Freeman, 1973.

    Google Scholar 

  19. Rohlf, F.J., NTSYS-Pc: Numerical Taxonomy and Multivariate Analysis System, Version 1.60, New York: Exter, 1990.

    Google Scholar 

  20. Oleinik, A.G., Skurikhina, L.A., and Brykov, Vl.A., The Divergence of the Dolly Varden Char Salvelinus malma in Asian Northern Pacific Population Inferred from the PCR-RFLP Analysis of Mitochondrial DNA, Genetika (Moscow), 2002, vol. 38,no. 10, pp. 1393-1401.

    Google Scholar 

  21. Nei, M. and Tajima, F., DNA Polymorphism Detectable by Restriction Endonucleases, Genetics, 1981, vol. 97, pp. 145-163.

    Google Scholar 

  22. Nei, M. and Miller, J.C., A Simple Method for Estimating Average Number of Nucleotide Substitutions within and between Populations from Restriction Data, Genetics, 1990, vol. 125, pp. 873-879.

    Google Scholar 

  23. Berg, W.J. and Ferris, S.D., Restriction Endonuclease Analysis of Salmonid Mitochondrial DNA, Can. J. Fish. Aquat. Sci., 1984, vol. 41, pp. 1041-1047.

    Google Scholar 

  24. Gyllensten, U.B. and Wilson, A.C., Mitochondrial DNA of Salmonids: Inter-and Intraspecific Variability Detected with Restriction Enzymes, in Population Genetics and Fishery Management, Seattle: Univ. Washington Press, 1987, pp. 301-317.

    Google Scholar 

  25. Kartavtsev, Yu.F., Glubokovskii, M.K., and Chereshnev, I.A., Genetic Differentiation and Variation of Two Sympatric Char Species (Salvelinus, Salmonidae) of Chukotka, Genetika (Moscow), 1983, vol. 19,no. 4, pp. 584-593.

    Google Scholar 

  26. Osinov, A.G. and Pavlov, S.D., Allozyme Variation and Genetic Divergence of Populations of Arctic Char and Dolly Varden Char (Salvelinus alpinus-S. malma Complex), Vopr. Ikhtiol., 1998, vol. 38,no. 1, pp. 47-61.

    Google Scholar 

  27. Osinov, A.G., Arctic Char Salvelinus alpinus of Trans-Baikal Region and Taimyr: Genetic Differentiation and Origin, Vopr. Ikhtiol., 2002, vol. 42,no. 2, pp. 149-160.

    Google Scholar 

  28. Osinov, A.G., Evolutionary Relationships between the Major Taxa of the Salvelinus alpinus-Salvelinus malma Complex: The Results of Comparison of Allozyme Data by Different Authors, Vopr. Ikhtiol., 2001, vol. 41,no. 2, pp. 167-183.

    Google Scholar 

  29. Oleinik, A.G. and Skurikhina, L.A., Phylogenetic Relationships among Anadromous Chars of the Genus Salvelinus (Salmonidae, Salmoniformes) Based on Restriction Endonuclease Analysis of Nuclear DNA, Genetika (Moscow), 1999, vol. 35,no. 9, pp. 1258-1268.

    Google Scholar 

  30. Phillips, R.B., Sajdak, S.L., and Domanico, M.J., Relationships among Chars Based on DNA Sequences, Nordic J. Freshwater Res., 1995, vol. 71, pp. 378-391.

    Google Scholar 

  31. Behnke, R.J., A Systematic Review of the Genus Salvelinus, Chars: Salmonid Fishes of the Genus Salvelinus, Balon, E.K., Ed., Hague: Junk, 1980, pp. 441-480.

    Google Scholar 

  32. Pavlinov, I.Ya., Potapova, E.G., and Yakhontov, E.L., Quantitative Analysis of the Effect of Initial Conditions on the Results of Phylogenetic Reconstructions, Zh. Obshch. Biol., 1993, vol. 54,no. 2, pp. 149-166.

    Google Scholar 

  33. Grewe, P.M., Billington, N., and Hebert, P.D.N., Phylogenetic Relationships among Members of Salvelinus Inferred from Mitochondrial DNA Divergence, Can. J. Fish. Aquat. Sci., 1990, vol. 47,no. 5, pp. 984-991.

    Google Scholar 

  34. Wilson, G.M., Thomas, W.K., and Beckenbach, A.T., Intra-and Interspecific Mitochondrial DNA Sequence Divergence in Salmo: Rainbow, Steelhead and Cutthroat Trouts, Can. J. Zool., 1985, vol. 63,no. 9, pp. 2088-2094.

    Google Scholar 

  35. Wilson, C.C., Hebert, P.D.N., Reist, J.D., and Dempson, J.B., Phylogeography and Postglacial Dispersal of Arctic Char Salvelinus alpinus in North America, Mol. Evol., 1996, vol. 5, pp. 187-197.

    Google Scholar 

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Oleinik, A.G., Skurikhina, L.A. & Brykov, V.A. Differentiation of the Dolly Varden Char (Salvelinus malma) and the Taranetz Char (Salvelinus taranetzi) Inferred from the PCR–RFLP Analysis of Mitochondrial DNA. Russian Journal of Genetics 40, 300–306 (2004). https://doi.org/10.1023/B:RUGE.0000021631.11738.25

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