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Development of Molecular Cytogenetics and Physical Mapping of Ribosomal RNA Genes in Lupinus

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Biologia Plantarum

Abstract

Identification of individual chromosomes in Lupinus is not possible due to gradient in size and similar morphology. To overcome this problem, molecular cytogenetics was developed for Lupinus. As an initial step in karyotype analysis, fluorescent in situ hybridization (FISH) was performed to determine genomic distribution of rRNA genes in L. hispanicus, L. luteus and L. × hispanicoluteus. It was found that all three diploid species posses two chromosome pairs carrying 18S-5.8S-25S rDNA and one chromosome pair carrying 5S rDNA. The use of probes for rDNA permitted unambiguous identification of three different pairs of chromosomes and revealed conservation of the number of rDNA loci among the three species. The study represents the first step in physical mapping of Lupinus genome through FISH by providing distinct chromosome landmarks.

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References

  • Adachi, J., Watanabe, K., Fukui, K., Ohmido, N., Kosuge, K.: Chromosomal location and reorganization of the 45S and 5S rDNA in the Brachyscome lineariloba complex (Asteraceae).-J. Plant Res. 110: 371–377, 1997.

    CAS  Google Scholar 

  • Ali, H.B., Meister, A., Schubert, I.: DNA content, rDNA loci, and DAPI bands reflect the phylogenetic distance between Lathyrus species.-Genome 43: 1027–1032, 2000.

    Article  PubMed  CAS  Google Scholar 

  • Atkins, C.A., Smith, P.M.C., Gupta, S., Jones, M.G.K., Caligari, P.D.S.: Genetics, cytology and biotechnology.-In: Gladstones, J.S., Atkins, C.A., Hamblin, J. (ed.): Lupins as Crop Plants: Biology, Production and Utilization. Pp. 67–92. CAB International, Wallingford-New York 1998.

    Google Scholar 

  • Calderini, O., Pupilli, F., Cluster, P.D., Mariani, A., Arcioni, S.: Cytological studies of the nucleolus organizing regions in the Medicago complex: sativa-coerulea-falcata.-Genome 39: 914–920, 1996.

    Google Scholar 

  • Cheng, Z., Presting, G.G., Buell, C.R., Wing, R.A., Jiang, J.: High-resolution pachytene chromosome mapping of bacterial artificial chromosomes anchored by genetic markers reveals the centromere location and the distribution of genetic recombination along chromosome 10 of rice.-Genetics 157: 1749–1757, 2001.

    PubMed  CAS  Google Scholar 

  • Cuadrado, A., Schwarzacher, T.: The chromosomal organization of simple repeats in wheat and rye genomes.-Chromosoma 107: 587–594, 1998.

    Article  PubMed  CAS  Google Scholar 

  • Doleželová, M., Valárik, M., Swennen, R., Horry, J.P., Doležel, J.: Physical mapping of the 18S–25S and 5S ribosomal RNA genes in diploid bananas.-Biol. Plant. 41: 497–505, 1998.

    Article  Google Scholar 

  • Dong, F., Song, J., Naess, S.K., Helgeson, J.P., Gebhardt, C., Jiang, J.: Development and applications of a set of chromosome-specific cytogenetic DNA markers in potato.-Theor. appl. Genet. 101: 1001–1007, 2000.

    Article  CAS  Google Scholar 

  • Fuchs, J., Kühne, M., Schubert, I.: Assignment of linkage groups to pea chromosomes after karyotyping and gene mapping by fluorescent in situ hybridization.-Chromosoma 107: 272–276, 1998.

    Article  PubMed  CAS  Google Scholar 

  • Gladstones, J.S.: Distribution, origin, taxonomy, history and importance.-In: Gladstones, J.S., Atkins, C.A., Hamblin, J. (ed.): Lupins as Crop Plants: Biology, Production and Utilization. Pp. 1–37. CAB International, Wallingford-New York 1998.

    Google Scholar 

  • Hanson, R.E., Islam-Faridi, M.N., Percival, E.A., Crane, C.F., Ji, Y., McKnight, T.D., Stelly, D.M., Price, H.J.: Distribution of 5S and 18S–28S rDNA loci in a tetraploid cotton (Gossypium hirsutum L. and its putative diploid ancestors.-Chromosoma 105: 55–61, 1996.

    Article  PubMed  CAS  Google Scholar 

  • Heslop-Harrison, J.S.: The molecular cytogenetics of plants.-J. Cell Sci. 100: 15–21, 1991.

    CAS  Google Scholar 

  • Kulikova, O., Gualtieri, G., Geurts, R., Kim, D.J., Cook, D., Huguet, T., de Jong, H., Fransz, P.F., Bisseling, T.: Integration of the FISH pachytene and genetic maps of Medicago truncatula.-Plant J. 27: 49–58, 2001.

    Article  PubMed  CAS  Google Scholar 

  • Maluszyńska, J., Heslop-Harrison, J.S.: Physical mapping of rDNA loci in Brassica species.-Genome 36: 774–781, 1993.

    Google Scholar 

  • Naganowska, B., Ladoń, D.: Chromosomes of Lupinus hispanicus subsp. hispanicus Boiss. et Reut., L. luteus L. and their hybrids.-J. appl. Genet. 41: 167–170, 2000.

    Google Scholar 

  • Nouzová, M., Kubaláková, M., Doleželová, M., Koblížková, A., Neumann, P., Doležel, J., Macas, J.: Cloning and characterization of new repetitive sequences in field bean (Vicia faba L.).-Ann. Bot. 83: 535–541, 1999.

    Article  Google Scholar 

  • Obermayer, R., Święcicki, W.K., Greilhuber, J.: Flow cytometric detection of genome size in some Old World Lupinus species (Fabaceae).-Plant Biol. 1: 1–8, 1999.

    Google Scholar 

  • Ohmido, N., Fukui, K.: Cytological studies of African cultivated rice, Oryza glaberrima.-Theor. appl. Genet. 91: 212–217, 1995.

    Article  CAS  Google Scholar 

  • Pickering, R.A., Malyshev, S., Künzel, G., Johnston, P.A., Korzun, V., Menke, M., Schubert, I.: Locating introgressions of Hordeum bulbosum chromatin within the H. vulgare genome.-Theor. appl. Genet. 100: 27–31, 2000.

    Article  CAS  Google Scholar 

  • Raina, S.N., Mukai, Y.: Detection of a variable number of 18S-5.8S-26S and 5S ribosomal DNA loci by fluorescent in situ hybridization in diploid and tetraploid Arachis species.-Genome 42: 52–59, 1999.

    Article  CAS  Google Scholar 

  • Rogers, S.O., Bendich, A.J.: Ribosomal RNA genes in plants: A variability in copy number and in the intergenic spacer.-Plant mol. Biol. 9: 509–520, 1987.

    Article  CAS  Google Scholar 

  • Schmidt, T., Jung, C., Heslop-Harrison, J.S., Kleine, M.: Detection of alien chromatin conferring resistance to the beet cyst nematode (Heterodera schachtii Schm.) in cultivated beet (Beta vulgaris L.) using in situ hybridization.-Chromosome Res. 5: 186–1963, 1997.

    Article  PubMed  CAS  Google Scholar 

  • Święcicki, W., Święcicki, W.K., Nijaki, T.: Lupinus × hispanicoluteus — an interspecific hybrid of Old World lupins.-Acta Soc. Bot. Pol. 68: 217–220, 1999.

    Google Scholar 

  • Wolko, B., Weeden, N.F.: Estimation of Lupinus genome polyploidy on the basis of isozymic loci number.-Genet. Pol. 30: 165–171, 1989.

    Google Scholar 

  • Yakura, K., Tanifuji, S.: Molecular cloning and restriction analysis of EcoRI-fragments of Vicia faba rDNA.-Plant Cell Physiol. 24: 1327–1330, 1983.

    CAS  Google Scholar 

Download references

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Naganowska, B., Doležel, J. & Święcicki, W. Development of Molecular Cytogenetics and Physical Mapping of Ribosomal RNA Genes in Lupinus . Biologia Plantarum 46, 211–215 (2003). https://doi.org/10.1023/A:1022846526246

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