Skip to main content
Log in

Soil pathogen, Fusarium oxysporum induced wilt disease in chickpea: a review on its dynamicity and possible control strategies

  • Review Article
  • Published:
Proceedings of the Indian National Science Academy Aims and scope Submit manuscript

Abstract

Chickpea (Cicer arietinum L.) is the major crop legume gaining steady focus for its enormous nutritional and medicinal properties globally. India is the crucial contributor to chickpea production in the world. Despite of its extensive significance, the yield of this crop legume is seriously curtailed by wilt causing pathogen Fusarium oxysporum f. sp. ciceris. Extensive pathogenic variability and mutability favors the pathogenesis over resistance. Although many approaches have been taken to restrain the pathogen most of them failed to meet the need. Recently, various advanced genomics and transcriptomics platforms give a wider arena in this field with a new dimension. The huge information that is generated bit-by-bit may give clues to develop future resistance strategy for Chickpea against Fusarium attack. The present review focuses on detailed symptomatic analyses of wilt disease in chickpea, the disease cycle, and genetic variability of the pathogen. Besides, different wilt management strategies that are followed are also discussed. Finally, the possibilities and utilization of different transcriptomic techniques, especially next-generation sequencing platforms are also highlighted. This review will surely portray a comprehensive idea of the disease, pathogen as well as control strategies which will be useful in future research on chickpea-Fusarium interplay.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6

Similar content being viewed by others

References

  • Ahmad, Z., Mumtaz, A.S., Ghafoor, A., Ali, A., Nisar, M.: Marker Assisted Selection (MAS) for chickpea Fusarium oxysporum wilt resistant genotypes using PCR based molecular markers. Mol. Biol. Rep. 41, 6755–6762 (2014)

    Article  CAS  Google Scholar 

  • Almasi, M.A.: Development of a colorimetric loop-mediated isothermal amplification assay for the visual detection of Fusarium oxysporum f. sp. melonis. Horticul. Plant J. 5, 129–136 (2019)

    Article  Google Scholar 

  • Annis, S.L., Goodwin, P.H.: Recent advances in the molecular genetics of plant cell wall-degrading enzymes produced by plant pathogenic fungi. Eur. J. Plant Pathol. 103, 1–14 (1997)

    Article  CAS  Google Scholar 

  • Artiaga, O.P., Spehar, C.R., Silva, P.P., Nascimento, W.M., Boiteux, L.S.: Chemical and genetic control of the Fusarium species complex in chickpea and their effects on stand establishment under highland subtropical conditions. Acta Hortic. 1249, 189–192 (2019)

    Article  Google Scholar 

  • Ashraf, N., Ghai, D., Barman, P., Basu, S., Gangisetty, N., Mandal, M.K., Chakraborty, S.: Comparative analyses of genotype dependent expressed sequence tags and stress-responsive transcriptome of chickpea wilt illustrate predicted and unexpected genes and novel regulators of plant immunity. BMC Genomics 10, 415 (2009)

    Article  CAS  Google Scholar 

  • Atkinson, N.J., Urwin, P.E.: The interaction of plant biotic and abiotic stresses: from genes to the field. J. Exp. Bot. 63, 3523–3543 (2012)

    Article  CAS  Google Scholar 

  • Ayyar, V.R., Iyer, R.B.: A preliminary note on the mode of inheritance of reaction to wilt in Cicer arietinum. Proc. Plant Sci. 3, 438–443 (1936)

    Article  Google Scholar 

  • Baayen, R.P., O’Donnell, K., Bonants, P.J., Cigelnik, E., Kroon, L.P., Roebroeck, E.J., Waalwijk, C.: Gene genealogies and AFLP analyses in the Fusarium oxysporum complex identify monophyletic and nonmonophyletic formae speciales causing wilt and rot disease. Phytopathology 90, 891–900 (2000)

    Article  CAS  Google Scholar 

  • Bailey, K.L., Lazarovits, G.: Suppressing soil-borne diseases with residue management and organic amendments. Soil Tillage Res. 72, 169–180 (2003)

    Article  Google Scholar 

  • Bani, M., Rispail, N., Evidente, A., Rubiales, D., Cimmino, A.: Identification of the main toxins isolated from Fusarium oxysporum f. sp. pisi race 2 and their relation with isolates’ pathogenicity. J. Agric. Food Chem. 62, 2574–2580 (2014)

    Article  CAS  Google Scholar 

  • Bekkar, A.A., Zaim, S., Belabid, L.: Induction of systemic resistance in chickpea against Fusarium wilt by Bacillus strains. Arch. Phytopathol. Plant Prot. 51, 70–80 (2018)

    Article  Google Scholar 

  • Bell, A.A., Gu, A., Olvey, J., Wagner, T.A., Tashpulatov, J.J., Prom, S., Quintana, J., Nichols, R.L., Liu, J.: Detection and characterization of Fusarium oxysporum f. sp. vasinfectum VCG0114 (race 4) isolates of diverse geographic origins. Plant Dis. 103, 1998–2009 (2019)

    Article  CAS  Google Scholar 

  • Bhar, A., Gupta, S., Chatterjee, M., Sen, S., Das, S.: Differential expressions of photosynthetic genes provide clues to the resistance mechanism during Fusarium oxysporum f. sp. ciceri race 1 (Foc1) infection in chickpea (Cicer arietinum L.). Eur. J. Plant Pathol. 148, 533–549 (2017)

    Article  CAS  Google Scholar 

  • Bockus, W.W., O’Connor, J.P., Raymond, P.J.: Effect of residue management method on incidence of Cephalosporium stripe under continuous winter wheat production. Plant Dis. 67, 1323–1324 (1983)

    Article  Google Scholar 

  • Boyko, A., Kovalchuk, I.: Genome instability and epigenetic modificationheritable responses to environmental stress? Curr. Opin. Plant Biol. 14, 260–266 (2011)

    Article  Google Scholar 

  • Butler, E.J.: Fungi and Diseases in Plants, pp 547. Thacker Spink and Co., Calcutta, India (1918)

  • Buxton, E.W.: A change of pathogenic race in Fusarium oxysporum f. sp. pisi induced by root exudates from a resistant host. Nature 181, 1222–1224 (1958)

    Article  Google Scholar 

  • Cabello, S., Lorenz, C., Crespo, S., Cabrera, J., Ludwig, R., Escobar, C., Hofmann, J.: Altered sucrose synthase and invertase expression affects the local and systemic sugar metabolism of nematode-infected Arabidopsis thaliana plants. J. Exp. Bot. 65, 201–212 (2013)

    Article  CAS  Google Scholar 

  • Chauhan, Y.S., Nene, Y.L., Johansen, C., Haware, M.P., Saxena, N.P., Sardar, S., Sharma, S.B., Sahrawat, K.L., Burford, J.R., Rupela, O.P., Kumar Rao, J.V.D.K., Sithanantham, S.: Effects of soil solarization on pigeon pea and chickpea. Research Bulletin no. 11. International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Patancheru, AP, India (1988)

  • Cherdshewasart, W., Gharti-Chhetri, G.B., Saul, M.W., Jacobs, M., Negrutiu, I.: Expression instability and genetic disorders in transgenic Nicotiana plumbaginifolia L. plants. Transgenic Res 2, 307–320 (1993)

    Article  CAS  Google Scholar 

  • Choudhary, A.K., Kumar, S., Patil, B.S., Sharma, M., Kemal, S., Ontagodi, T.P., Datta, S., Patil, P., Chaturvedi, S.K., Sultana, R., Hegde, V.S.: Narrowing yield gaps through genetic improvement for Fusarium wilt resistance in three pulse crops of the semi-arid tropics. SABRAO J. Breed Gen. 45, 341–370 (2013)

    Google Scholar 

  • Cole, R.J., Kirksey, J.W., Cutler, H.G., Doupnik, B.L., Peckham, J.C.: Toxin from Fusarium moniliforme: effects on plants and animals. Science 179, 1324–1326 (1973)

    Article  CAS  Google Scholar 

  • Collard, B.C., Mackill, D.J.: Marker-assisted selection: an approach for precision plant breeding in the twenty-first century. Philos. Trans. R. Soc. Lond. B Biol. Sci. 363, 557–572 (2008)

    Article  CAS  Google Scholar 

  • Conn, K.L., Tenuta, M., Lazarovits, G.: Liquid swine manure can kill Verticillium dahliae microsclerotia in soil by volatile fatty acid, nitrous acid, and ammonia toxicity. Phytopathology 95, 28–35 (2005)

    Article  Google Scholar 

  • Crouch, J.H. Molecular Marker-Assisted Breeding. Asia and Pacific Seed Association Annual Conference, http://oar.icrisat.org/6299/1/Molecular%20Marker-Assisted%20Breeding.pdf(2000)

  • Das, S., Upadhyaya, H.D., Srivastava, R., Bajaj, D., Gowda, C.L.L., Sharma, S., Parida, S.K.: Genome-wide insertion–deletion (InDel) marker discovery and genotyping for genomics-assisted breeding applications in chickpea. DNA Res dsv020 (2015)

  • De Chaudhary, R.K., Naimuddin, R.G.: Comparative efficacy of bin-control agents and fungicides for controlling chickpea wilt caused by Fusarium oxysporum f sp ciceri. Ind. J. Agric. Sci. 66, 370–373 (1996)

    Google Scholar 

  • Demers, J.E., Gugino, B.K., Jiménez-Gasco, M.D.M.: Highly diverse endophytic and soil Fusarium oxysporum populations associated with field-grown tomato plants. Appl. Environ. Microbiol. 81, 81–90 (2015)

    Article  CAS  Google Scholar 

  • Dhedhi, B.M., Gupta, O., Patel, V.A.: Antagonistic effect of microorganisms to Fusarium oxysporum f. sp. ciceri. Ind. J. Mycol. Plant Pathol. 20, 70–71 (1990)

    Google Scholar 

  • Gan, X., Stegle, O., Behr, J., Steffen, J.G., Drewe, P., Hildebrand, K.L., Kahles, A.: Multiple reference genomes and transcriptomes for Arabidopsis thaliana. Nature 477, 419–423 (2011)

    Article  CAS  Google Scholar 

  • Glazebrook, J.: Contrasting mechanisms of defense against biotrophic and necrotrophic pathogens. Annu. Rev. Phytopathol. 43, 205–227 (2005)

    Article  CAS  Google Scholar 

  • Grewal, R.K., Das, S.: Microarray data analysis: gaining biological insights. J. Biomed. Sci. Eng. 6, 996–1005 (2013)

    Article  Google Scholar 

  • Gumber, R.K., Kumar, J., Hanaware, M.P.: Inheritance of resistance to Fusarium wilt in chickpea. Plant Breed 114, 277–279 (1995)

    Article  Google Scholar 

  • Gupta, S., Chakraborti, D., Rangi, R.K., Basu, D., Das, S.: A molecular insight into the early events of Chickpea (Cicer arietinum) and Fusarium oxysporum f. sp. ciceri (Race 1) interaction through cDNA-AFLP analysis. Phytopathology 99, 1245–1257 (2009)

    Article  CAS  Google Scholar 

  • Gupta, S., Chakraborti, D., Sengupta, A., Basu, D., Das, S.: Primary metabolism of chickpea is the initial target of wound inducing early sensed Fusarium oxysporum f. sp. ciceri race I. PLoS ONE 5, e9030 (2010)

    Article  CAS  Google Scholar 

  • Gupta, S., Bhar, A., Das, S.: Understanding the molecular defence responses of host during chickpea–Fusarium interplay: where do we stand? Funct. Plant Biol. 40, 1285–1297 (2013)

    Article  Google Scholar 

  • Gupta, S., Bhar, A., Chatterjee, M., Ghosh, A., Das, S.: Transcriptomic dissection reveals wide spread differential expression in chickpea during early time points of Fusarium oxysporum f. sp. ciceri Race 1 attack. PLoS ONE 12, e0178164 (2017)

    Article  CAS  Google Scholar 

  • Gurjar, G.S., Giri, A.P., Gupta, V.S.: Gene expression profiling during wilting in chickpea caused by Fusarium oxysporum f. sp. ciceri. Am. J. Plant Sci. 3, 190 (2012)

    Article  CAS  Google Scholar 

  • Haware, M.P.: Fusarium wilt and other important diseases of chickpea in the Mediterranean area. Options Méditerranéennes Série a: Séminaires Méditerranéens 9, 61–64 (1990)

    Google Scholar 

  • Haware, M.P., Nene, Y.L.: Sources of resistance to wilt and root rots of chickpea. Int. Chickpea Newslett. 3, 11–12 (1980)

    Google Scholar 

  • Haware, M.P., Nene, Y.L.: Symptomless carriers of chickpea wilt Fusarium [Cicer arietinum, Fusarium oxysporum, cultivated plants and weeds]. Plant Dis. 66, 250–251 (1982)

    Article  Google Scholar 

  • Haware, M.P., Nene, Y.L., Rajeshwari, R.: Eradication of Fusarium oxysporum f. sp. ciceri transmitted in chickpea seed. Phytopathology 68, 1364–1367 (1978)

    Article  Google Scholar 

  • Haware, M.P., Nene, Y.L., Natarajan, M.: The survival of Fusarium oxysporum f. sp. ciceri in the soil in the absence of chickpea. Phytopathol Mediterranea 35(1), 9–12 (1996)

    Google Scholar 

  • Hudec, K.: Influence of seed treatment, temperature and origin of inocula on pathogenicity of Fusarium species to wheat and barley seedlings. Cereal Res. Commun. 34, 1059–1066 (2006)

    Article  CAS  Google Scholar 

  • Jalali, B.L., Chand, H.: Chickpea Wilt. Plant Dis. Iint. Imp. 1, 429–444 (1992)

    Google Scholar 

  • Jamali, F., Sharifi-Tehrani, A., Okhovvat, M., Zakeri, Z., Saberi-Riseh, R.: Biological control of chickpea Fusarium wilt by antagonistic bacteria under greenhouse condition. Commun. Agric. Appl. Biol. Sci. 69, 649–651 (2003)

    Google Scholar 

  • Jamil, A., Ashraf, S.: Utilization of chemical fungicides in managing the wilt disease of chickpea caused by Fusarium oxysporum f. sp. ciceri. Arch. Phytopathol. Plant Protect. (2020). https://doi.org/10.1080/03235408.2020.1803705

    Article  Google Scholar 

  • Jendoubi, W., Bouhadida, M., Boukteb, A., BéjiKharrat, M.M.: Fusarium wilt affecting chickpea crop. Agriculture 7, 23 (2017)

    Article  CAS  Google Scholar 

  • Jhanwar, S., Priya, P., Garg, R., Parid, S.K., Tyagi, A.K., Jain, M.: Transcriptome sequencing of wild chickpea as a rich resource for marker development. Plant Biotech. J. 10, 690–702 (2012)

    Article  CAS  Google Scholar 

  • Jha, U.C., Chaturvedi, S.K., Bohra, A., Basu, P.S., Khan, M.S., Barh, D.: Abiotic stresses, constraints and improvement strategies in chickpea. Plant Breed. 133(2), 163–178 (2014)

    Article  Google Scholar 

  • Jimenez-Diaz, R.M., Trapero-Casas, A., de La Colina, J.C.: Races of Fusarium oxysporum f. sp. ciceri infecting chickpeas in southern Spain. In: Tjamos, E.C., Beckman, C.H. (eds.) Vascular wilt diseases of plants, pp. 515–520. Springer, Berlin, Heidelberg (1989)

    Chapter  Google Scholar 

  • Jiménez-Díaz, R.M., Alcala-Jimenez, A., Hervás, A., Trapero-Casas, J.L.: Pathogenic variability and host resistance in the Fusarium oxysporum f. sp. ciceris-Cicer arietinum pathosystem. Hodowla Roślin, Aklimatyzacja i Nasiennictwo 37, 87–94 (1993)

    Google Scholar 

  • Jiménez-Díaz, R.M., Jiménez-Gasco, M.D.M. Integrated management of Fusarium wilt diseases. http://hdl.handle.net/10396/11002 (2011)

  • Jiménez-Díaz, R.M., Castillo, P., Jiménez-Gasco, M.D.M., Landa, B.B., Navas-Cortés, J.A.: Fusarium wilt of chickpeas: biology, ecology and management. Crop Protect 73, 16–27 (2015)

    Article  Google Scholar 

  • Jiménez-Fernández, D., Montes-Borrego, M., Jiménez-Díaz, R.M., Navas-Cortés, J.A., Landa, B.B.: In planta and soil quantification of Fusarium oxysporum f. sp. ciceris and evaluation of Fusarium wilt resistance in chickpea with a newly developed quantitative polymerase chain reaction assay. Phytopathol 101, 250–262 (2011)

    Article  CAS  Google Scholar 

  • Jiménez-Gasco, M., Navas-Cortés, J.A., Jiménez-Díaz, R.M.: The Fusarium oxysporum f. sp. ciceris/Cicer arietinum pathosystem: a case study of the evolution of plant-pathogenic fungi into races and pathotypes. Int. Microbiol. 7, 95–104 (2004)

    Google Scholar 

  • Jorge, I., Navas-Cortes, J.A., Jiménez-Díaz, R.M., Tena, M.: Cell wall degrading enzymes in fusarium wilt of chickpea: correlation between pectinase and xylanase activities and disease development in plants infected with two pathogenic races of Fusarium oxysporum f. sp. ciceris. Botany 84, 1395–1404 (2006)

    CAS  Google Scholar 

  • Katoh, H., Yamazaki, S., Fukuda, T., Sonoda, S., Nishigawa, H., Natsuaki, T.: Detection of Fusarium oxysporum f. sp. fragariae by using loop-mediated isothermal amplification. Plant Dis. (2020). https://doi.org/10.1094/PDIS-03-20-0590-RE

    Article  Google Scholar 

  • Kaur, N.P., Mukhopadhyay, A.N.: Integrated control of ‘chickpea wilt complex’ by Trichoderma and chemical methods in India. Int. J. Pest. Manage. 38, 372–375 (2008)

    Google Scholar 

  • Kaur, P., Thakur, R., Duhan, J.S., Chaudhary, A.: Management of wilt disease of chickpea in vivo by silver nanoparticles; biosynthesized by rhizospheric microflora of chickpea (Cicer arietinum). J. Chem. Technol. Biotech. (2018). https://doi.org/10.1002/jctb.5680

    Article  Google Scholar 

  • Kelly, A., Alcala-Jimenez, A.R., Bainbridge, B.W., Heale, J.B., Perez-Artes, E., Jiménez-Díaz, R.M.: Use of genetic fingerprinting and random amplified polymorphic DNA to characterize pathotypes of Fusarium oxysporum f. sp. ciceris infecting chickpea. Phytopathology 84, 1293–1298 (1994)

    Article  CAS  Google Scholar 

  • Kelly, A.G., Bainbridge, B.W., Heale, J.B., Perez-Artes, E., Jiménez-Dıaz, R.M.: In planta-polymerase-chain-reaction detection of the wilt-inducing pathotype of Fusarium oxysporum f. sp. ciceris in chickpea (Cicer arietinum L.). Physiol. Mol. Plant Pathol. 52, 397–409 (1998)

    Article  CAS  Google Scholar 

  • Khemka, N., Singh, V.K., Garg, R., Jain, M.: Genome-wide analysis of long intergenic non-coding RNAs in chickpea and their potential role in flower development. Sci. Rep. 6, 33297 (2016)

    Article  CAS  Google Scholar 

  • Kumar, S.: Inheritance of resistance to Fusarium wilt (race 2) in chickpea. Plant Breed. 117, 139–142 (1998)

    Article  Google Scholar 

  • Kumar, J., Haware, M.P.: Inheritance of resistance to fusarium wilt in chickpea. Phytopathology 72, 1035–1036 (1982)

    Article  Google Scholar 

  • Latvala, S., Haapalainen, M., Kivijärvi, P., Suojala Ahlfors, T., Iivonen, S., Hannukkala, A.: Sampling and PCR method for detecting pathogenic Fusarium oxysporum strains in onion harvest. Lett. Appl. Microbiol. 70, 210–220 (2020)

    Article  CAS  Google Scholar 

  • Lazarovits, G.: Managing soilborne plant diseases through selective soil disinfestation by a knowledge-based application of soil amendments. Phytoparasitica 32, 427–432 (2004)

    Article  Google Scholar 

  • Libault, M., Farmer, A., Joshi, T., Takahashi, K., Langley, R.J., Franklin, L.D., He, J., Xu, D., May, G., Stacey, G.: An integrated transcriptome atlas of the crop model Glycine max, and its use in comparative analyses in plants. Plant J. 63, 86–99 (2010)

    CAS  Google Scholar 

  • Magdama, F., Monserrate-Maggi, L., Serrano, L., Sosa, D., Geiser, D.M., Jiménez-Gasco, M.D.M.: Comparative analysis uncovers the limitations of current molecular detection methods for Fusarium oxysporum f. sp. cubense race 4 strains. PLoS ONE 14, e0222727 (2019)

    Article  CAS  Google Scholar 

  • Maloy, O.C.: Plant disease control: principles and practice. Wiley, New York (1993)

    Google Scholar 

  • Matthews, M.C., Mostert, D., Ndayihanzamaso, P., Rose, L.J., Viljoen, A.: Quantitative detection of economically important Fusarium oxysporum f. sp. cubense strains in Africa in plants, soil and water. PLoS ONE 15, e0236110 (2020)

    Article  CAS  Google Scholar 

  • Mendgen, K., Hahn, M.: Plant infection and the establishment of fungal biotrophy. Trends Plant Sci. 7, 352–356 (2002)

    Article  CAS  Google Scholar 

  • Meshram, S., Patel, J.S., Yadav, S.K., Singh, D.P., Kumar, G., Singh, H.B., Sarma, B.K.: Trichoderma mediate early and enhanced lignifications in chickpea during Fusarium oxysporum f. sp. ciceris infection. J. Basic Microbiol. (2018). https://doi.org/10.1002/jobm.201800212

    Article  Google Scholar 

  • Metz, P.L., Jacobsen, E., Stiekema, W.J.: Occasional loss of expression of phosphinothricin tolerance in sexual offspring of transgenic oilseed rape (Brassica napus L.). Euphytica 98, 189–196 (1997)

    Article  CAS  Google Scholar 

  • Mina, U., Dubey, S.C.: Effect of environmental variables on development of Fusarial wilt in chickpea (Cicer arietinum) cultivars. Indian J. Agric. Sci. 80, 23 (2010)

    Google Scholar 

  • Moradi, H., Bahramnejad, B., Amini, J., Siosemardeh, A., Haji-Allahverdipoor, K.: Suppression of chickpea (Cicer arietinum L.) Fusarium wilt by Bacillus subtillis and Trichoderma harzianum. Plant Omics 5, 68–74 (2012)

    CAS  Google Scholar 

  • Morin, R.D., Aksay, G., Dolgosheina, E., Ebhardt, H.A., Magrini, V., Mardis, E.R., Sahinalp, S.C., Unrau, P.J.: Comparative analysis of the small RNA transcriptomes of Pinus contorta and Oryza sativa. Genome Res. 18, 571–584 (2008)

    Article  CAS  Google Scholar 

  • Navas-Cortés, J.A., Landa, B.B., Méndez-Rodríguez, M.A., Jiménez-Díaz, R.M.: Quantitative modeling of the effects of temperature and inoculum density of Fusarium oxysporum f. sp. ciceris Races 0 and 5 on development of Fusarium wilt in chickpea cultivars. Phytopathology 97(5), 564–573 (2007)

    Article  CAS  Google Scholar 

  • Nene, Y.L., Reddy, M.V.: Chickpea diseases and their control. In: Saxena, M.C., Singh, K.B. (eds.) The chickpea, pp. 233–270. CABI, Wallingford (1987)

    Google Scholar 

  • Nikam, P.S., Jagtap, P.S., Sontakke, P.L.: Management of chickpea wilt caused by Fusarium oxysporum f. sp. ciceri. Afr. J. Agric. Res. 2(12), 692–697 (2007)

    Google Scholar 

  • Nimbalkar, S.B., Harsulkar, A.M., Giri, A., Sainani, M.N., Franceschi, V., Gupta, V.S.: Differentially expressed gene transcripts in roots of resistant and susceptible chickpea plant (Cicer arietinum L.) upon Fusarium oxysporum infection. Physiol. Mol. Plant Pathol. 68, 176–188 (2006)

    Article  CAS  Google Scholar 

  • Padwick, G.W.: The genus Fusarium III A critical study of the fungus causing wilt of Gram (Cicer arietinum L.) and of the related species of the subsection Orthocera, with special relation to the variability of key characteristics. Indian J Agricul. Sci. 10, 241–284 (1940)

  • Palmieri, D., Vitullo, D., De Curtis, F., Lima, G.: A microbial consortium in the rhizosphere as a new biocontrol approach against Fusarium decline of chickpea. Plant Soil 412, 425–439 (2017)

    Article  CAS  Google Scholar 

  • Pande, S., Rao, J.N., Sharma, M.: Establishment of the chickpea wilt pathogen Fusarium oxysporum f. sp. ciceris in the soil through seed transmission. Plant Pathol. J. 23, 3–6 (2007)

    Article  Google Scholar 

  • Pollier, J., Moses, T., González-Guzmán, M., De Geyter, N., Lippens, S., Vanden Bossche, R., Marhavý, P., Kremer, A., Morreel, K., Guérin, C.J., Tava, A., Oleszek, W., Thevelein, J.M., Campos, N., Goormachtig, S., Goossens, A.: The protein quality control system manages plant defence compound synthesis. Nature 504(7478), 148–152 (2013)

    Article  CAS  Google Scholar 

  • Pringle, R.B., Scheffer, R.P.: Host-specific plant toxins. Annu. Rev. Phytopathol. 2, 133–156 (1964)

    Article  CAS  Google Scholar 

  • Rachwa-Rosiak, D., Nebesny, E., Budryn, G.: Chickpeas—composition, nutritional value, health benefits, application to bread and snacks: a review. Crit. Rev. Food Sci. Nutr. 55, 1137–1145 (2015)

    Article  CAS  Google Scholar 

  • Ray, M., Achary, K.G., Nayak, S., Singh, S.: Development of a colloidal gold strip based immunochromatographic assay for rapid detection of Fusarium oxysporum in ginger. J. Sci. Food Agric. 99, 6155–6166 (2019)

    Article  CAS  Google Scholar 

  • Roldán-Arjona, T., Pérez-Espinosa, A., Ruiz-Rubio, M.: Tomatinase from Fusarium oxysporum f. sp. lycopersici defines a new class of saponinases. Mol. Plant-Microbe Interact. 12, 852–861 (1999)

    Article  Google Scholar 

  • Rubio, J., Hajj-Moussa, E., Kharrat, M., Moreno, M.T., Millan, T., Gil, J.: Two genes and linked RAPD markers involved in resistance to Fusarium oxysporum f. sp. ciceris race 0 in chickpea. Plant Breed. 122, 188–191 (2003)

    Article  CAS  Google Scholar 

  • Saabale, P.R., Dubey, S.C., Priyanka, K., Sharma, T.R.: Analysis of differential transcript expression in chickpea during compatible and incompatible interactions with Fusarium oxysporum f. sp. ciceris Race 4. 3 Biotech 8(2), 111 (2018)

    Article  Google Scholar 

  • Sabbavarapu, M.M., Sharma, M., Chamarthi, S.K., Swapna, N., Rathore, A., Thudi, M., Varshney, R.K.: Molecular mapping of QTLs for resistance to Fusarium wilt (race 1) and Ascochyta blight in chickpea (Cicer arietinum L.). Euphytica 193, 121–133 (2013)

    Article  Google Scholar 

  • Schippers, B., Van Eck, W.H.: Formation and survival of chlamydospores in Fusarium: disease, biology, and taxonomy, pp. 250–260. Penn State University Press, University Park (1981)

    Google Scholar 

  • Sestili, S., Polverari, A., Luongo, L., Ferrarini, A., Scotton, M., Hussain, J., Delledonne, M., Ficcadenti, N., Belisario, A.: Distinct colonization patterns and cDNA-AFLP transcriptome profiles in compatible and incompatible interactions between melon and different races of Fusarium oxysporum f. sp. melonis. BMC Genomics 12, 1 (2011)

    Article  CAS  Google Scholar 

  • Severin, A.J., Woody, J.L., Bolon, Y.T., Joseph, B., Diers, B.W., Farmer, A.D., Graham, M.A.: RNA-Seq Atlas of Glycine max: a guide to the soybean transcriptome. BMC Plant Biol. 10, 1 (2010)

    Article  CAS  Google Scholar 

  • Sharma, P.: Alarming occurrence of Fusarium wilt disease in pea (Pisum sativum L.) cultivations of Jabalpur district in Central India revealed by an array of pathogenicity tests. Agric. Biol. JN Am. 2, 981–994 (2011)

    Article  Google Scholar 

  • Sharma, K.D., Muehlbauer, F.J.: Fusarium wilt of chickpea: physiological specialization, genetics of resistance and resistance gene tagging. Euphytica 157, 1–14 (2007)

    Article  CAS  Google Scholar 

  • Sharma, K.D., Winter, P., Kahl, G., Muehlbauer, F.J.: Molecular mapping of Fusarium oxysporum f. sp. ciceris race 3 resistance gene in chickpea. Theor. Appl. Genet. 108, 1243–1248 (2004)

    Article  CAS  Google Scholar 

  • Sharma, M., Varshney, R.K., Rao, J.N., Kannan, S., Hoisington, D., Pande, S.: Genetic diversity in Indian isolates of Fusarium oxysporum f. sp. ciceris, chickpea wilt pathogen. Afr. J. Biotech. 8, 1016–1023 (2009)

    CAS  Google Scholar 

  • Sharma, K.D., Chen, W., Muehlbauer, F.J.: Genetics of chickpea resistance to five races of Fusarium wilt and a concise set of race differentials for Fusarium oxysporum f. sp. ciceris. Plant Dis 89, 385–390 (2005)

    Article  Google Scholar 

  • Sindhu, J.S., Singh, K.P., Slinkard, A.E.: Inheritance of resistance to Fusarium wilt in chickpeas. J. Hered. 74, 68–68 (1983)

    Article  Google Scholar 

  • Song, Z., Cox, R.J., Lazarus, C.M., Simpson, T.J.: Fusarin C biosynthesis in Fusarium moniliforme and Fusarium venenatum. Chem. Biol. Chem. 5, 1196–1203 (2004)

    Article  CAS  Google Scholar 

  • Stölting, K.N., Gort, G., Wüst, C., Wilson, A.B.: Eukaryotic transcriptomics in silico: optimizing cDNA-AFLP efficiency. BMC Gen. 10, 565 (2009)

    Article  CAS  Google Scholar 

  • Strange, R.N., Scott, P.R.: Plant disease: a threat to global food security. Annu. Rev. Phytopathol. 43, 83–116 (2005)

    Article  CAS  Google Scholar 

  • Stuthman, D.D., Leonard, K.J., Miller-Garvin, J.: Breeding crops for durable resistance to disease. Adv. Agron. 95, 319–367 (2007)

    Article  Google Scholar 

  • Sundin, G.W., Weigand, M.R.: The microbiology of mutability. FEMS Microbiol. Lett. 277, 11–20 (2007)

    Article  CAS  Google Scholar 

  • Szittya, G., Moxon, S., Santos, D.M., Jing, R., Fevereiro, M.P., Moulton, V., Dalmay, T.: High-throughput sequencing of Medicago truncatula short RNAs identifies eight new miRNA families. BMC Gen. 9, 1 (2008)

    Article  CAS  Google Scholar 

  • Tauzin, A.S., Giardina, T.: Sucrose and invertases a part of the plant defense response to the biotic stresses. Front. Plant Sci. 5, 293 (2014)

    Article  Google Scholar 

  • Tekeoglu, M., Tullu, A., Kaiser, W.J., Muehlbauer, F.J.: Inheritance and linkage of two genes that confer resistance to Fusarium wilt in chickpea. Crop Sci. 40, 1247–1251 (2000)

    Article  CAS  Google Scholar 

  • Trapero-Casas, A., Jiménez-Díaz, R.M.: Fungal wilt and root rot diseases of chickpea in southern Spain. Phytopathology 75, 1146–1151 (1985)

    Article  Google Scholar 

  • Tullu, A., Muehlbauer, F.J., Simon, C.J., Mayer, M.S., Kumar, J., Kaiser, W.J., Kraft, J.M.: Inheritance and linkage of a gene for resistance to race 4 of fusarium wilt and RAPD markers in chickpea. Euphytica 102, 227–232 (1998)

    Article  CAS  Google Scholar 

  • Tullu, A., Kaiser, W.J., Kraft, J.M., Muehlbauer, F.J.: A second gene for resistance to race 4 of Fusarium wilt in chickpea and linkage with a RAPD marker. Euphytica 109, 43–50 (1999)

    Article  CAS  Google Scholar 

  • Upasani, M.L., Limaye, B.M., Gurjar, G.S., Kasibhatla, S.M., Joshi, R.R., Kadoo, N.Y., Gupta, V.S.: Chickpea-Fusarium oxysporum interaction transcriptome reveals differential modulation of plant defense strategies. Sci. Rep. 7, 7746 (2017)

    Article  CAS  Google Scholar 

  • Varshney, R.K., Song, C., Saxena, R.K., Azam, S., Yu, S., Sharpe, A.G., Millan, T., Cook, D.R.: Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nat. Biotech. 31, 240–246 (2013)

    Article  CAS  Google Scholar 

  • Volkmuth, W., Turk, S., Shapiro, A., Fang, Y., Iegle, E., Van Haaren, M., Donson, J.: Technical advances: genome-Wide cDNA-AFLP analysis of the Arabidopsis transcriptome. Omics J. Integrat. Biol. 7, 143–159 (2003)

    Article  CAS  Google Scholar 

  • Walton, J.D.: Deconstructing the cell wall. Plant Physiol. 104, 1113 (1994)

    Article  CAS  Google Scholar 

  • Wang, Z., Gerstein, M., Snyder, M.: RNA-Seq: a revolutionary tool for transcriptomics. Nat. Rev. Genet. 10, 57–63 (2009)

    Article  CAS  Google Scholar 

  • Westermann, A.J., Gorski, S.A., Vogel, J.: Dual RNA-seq of pathogen and host. Nat. Rev. Microbiol. 10, 618–630 (2012)

    Article  CAS  Google Scholar 

  • Westermann, A.J., Barquist, L., Vogel, J.: Resolving host–pathogen interactions by dual RNA-seq. PLoS Pathogens 13, e1006033 (2017)

    Article  CAS  Google Scholar 

  • Xu H, Gao Y and Wang J (2012) Transcriptomic analysis of rice (Oryza sativa) developing embryos using the RNA-Seq technique. PLoS ONE 7 e30646

  • Zaim, S., Belabid, L., Bellahcene, M.: Biocontrol of chickpea Fusarium wilt by Bacillus spp. rhizobacteria. J. Plant Protect. Res. 53, 177–183 (2013)

    Article  Google Scholar 

Download references

Acknowledgements

This work was supported by the Grant provided to AB by Council of Scientific and Industrial Research, India (09/015(0378)/2009-EMR-1). SD acknowledges Indian National Academy of Sciences for her Senior Scientist fellowship. Funding organizations had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.

Author information

Authors and Affiliations

Authors

Corresponding authors

Correspondence to Anirban Bhar or Sampa Das.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Bhar, A., Jain, A. & Das, S. Soil pathogen, Fusarium oxysporum induced wilt disease in chickpea: a review on its dynamicity and possible control strategies. Proc.Indian Natl. Sci. Acad. 87, 260–274 (2021). https://doi.org/10.1007/s43538-021-00030-9

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s43538-021-00030-9

Keywords

Navigation