Abstract
Biofouling in environmental systems employs bacterial quorum sensing signals (autoinducers) and extracellular polymeric substances to onset the event. The present review has highlighted on the fundamental mechanisms behind biofilm formation over broad spectrum environmental niches especially membrane biofouling in water systems and consequent chances of pathogenic contamination leading to global economic loss. It has broadly discussed on bioelectrical signal (via, potassium gradient) and molecular signal (via, AHLs) mediated quorum sensing which help to propagate biofilm formation. The review has illustrated the potential of genomic intervention towards biofouled membrane microbial community and has uncovered possible features of biofilm microenvironment like quorum quenching bacteria, bioelectrical waves capture, siderophores arrest and surface modifications. Based on information, the concept of interception of quorum signals (AHLs) and bioelectrical signals (K+) by employing electro-modified (negative charges) membrane surface have been hypothesized in the present review to favour anti-biofouling.
Similar content being viewed by others
References
Anbazhagan D, Mansor M, Yan GO, Yusof MY, Hassan H, Sekaran SD (2012) Detection of quorum sensing signal molecules and identification of an autoinducer synthase gene among biofilm forming clinical isolates of Acinetobacter spp. PloS One 7:e36696
Araújo PA, Kruithof JC, Van Loosdrecht MCM, Vrouwenvelder JS (2012) The potential of stard modified feed spacers for biofouling control. J MemSci 403:58–70. https://doi.org/10.1016/j.memsci.2012.02.015
Babu SS, Mathew S, Kalarikkal N, Thomas S (2016) Antimicrobial, antibiofilm, and microbial barrier properties of poly (ε-caprolactone)/cloisite 30B thin films. 3 Biotech 6:249
Bengtsson MM, Sjøtun K, Øvreås L (2010) Seasonal dynamics of bacterial biofilms on the kelp Laminaria hyperborean. Aquat Microb Ecol. https://doi.org/10.3354/ame01409
Bouchez V, Caro V, Levillain E, Guigon G, Guiso N (2008) Genomic content of Bordetella pertussis clinical isolates circulating in areas of intensive children vaccination. PLoS One 3:e2437. https://doi.org/10.1371/journal.pone.0002437
Callow ME (1986) Fouling algae from 'in-service'ships. Bot Mar 29:351–358
Chae HR, Lee J, Lee CH, Kim IC, Park PK (2015) Graphene oxide-embedded thin-film composite reverse osmosis membrane with high flux, anti-biofouling, chlorine resistance. J Membr Sci 483:128–135. https://doi.org/10.1016/j.memsci.2015.02.045
Chede S, Anaya NM, Oyanedel-Craver V, Gorgannejad S, Harris TA, Al-Mallahi J, Abu-Dalo M, Qdais HA, Escobar IC (2017) Desalination using low biofouling nanocomposite membranes: from batch-scale to continuous-scale membrane fabrication. Desalination. https://doi.org/10.1016/j.desal.2017.05.007
Chen Y, Zhang Y, Zhang H, Liu J, Song C (2013) Biofouling control of halloysite nanotubes-decorated polyethersulfone ultrafiltration membrane modified with chitosan–silver nanoparticles. Chem Eng J 228:12–20. https://doi.org/10.1016/j.cej.2013.05.015
Chiellini C, Iannelli R, Modeo L, Bianchi V, Petroni G (2012) Biofouling of reverse osmosis membranes used in river water purification for drinking purposes: analysis of microbial populations. Biofouling 28:969–984
Chien SH, Hsieh MK, Li H, Monnell J, Dzombak D, Vidic R (2012) Pilot-scale cooling tower to evaluate corrosion, scaling, biofouling control strategies for cooling system makeup water. Rev Sci Instrum 83:024101. https://doi.org/10.1063/1.3680563
Copel A, Lucas S, Lapidus A, Barry K, Glavina del Rio T, Dalin E, Tice H, Pitluck S, Lowry S, Clum A, Schmutz J, Larimer F, Hauser L, Kyrpides N, Kim E, Schleheck D, Richardson P (2007) Complete sequence of Delftia acidovorans DSM 14801/SPH-1. Submitted to the EMBL/GenBank/DDBJ databases
Dancer SJ (2014) Controlling hospital-acquired infection: focus on the role of the environment and new technologies for decontamination. Clin Microbiol Rev 27:665–690
Das SK, Khan MMR, Parhaman T, Laffir F, Guha AK, Sekaran G, Mal AB (2013) Nano-silica fabricated with silver nanoparticles: antifouling adsorbent for efficient dye removal, effective water disinfection biofouling control. Nanoscale 5:5549–5560. https://doi.org/10.1039/c3nr00856h
Davey ME, O’toole GA (2000) Microbial biofilms: from ecology to molecular genetics. Microbiol Mol Biol Revs 64:847–867. https://doi.org/10.1128/MMBR.64.4.847-867.2000
Deep A, Chaudhary U, Gupta V (2011) Quorum sensing bacterial pathogenicity: from molecules to disease. J Lab Physicians 3:4. https://doi.org/10.4103/0974&%23x00AD;2727.78553
Dobretsov S, Abed RM, Teplitski M (2013) Mini-review: inhibition of biofouling by marine microorganisms. Biofouling 29:423–441. https://doi.org/10.1080/08927014.2013.776042
Dong C, Wang Z, Wu J, Wang Y, Wang J, Wang S (2017) A green strategy to immobilize silver nanoparticles onto reverse osmosis membrane for enhanced anti-biofouling property. Desalination 401:32–41. https://doi.org/10.1016/j.desal.2016.06.034
Douterelo I, Jackson M, Solomon C, Boxall J (2017) Spatial and temporal analogies in microbial communities in natural drinking water biofilms. Sci Total Environ 581:277–288
Eppinger M, Rosovitz MJ, Fricke WF, Rasko DA, Kokorina G, Fayolle C, Lindler LE, Carniel E, Ravel J (2007) The complete genome sequence of Yersinia pseudotuberculosis IP31758, the causative agent of far east scarlet-like fever. PLoS Genet 3:142. https://doi.org/10.1371/journal.pgen.0030142
Fang PK, Raphael BH, Maslanka SE, Cai S, Singh BR (2010) Analysis of genomic differences among Clostridium botulinum type A1 strains. BMC Genom 11:725. https://doi.org/10.1186/1471-2164-11-725
Feng L, Wu Z, Yu X (2013) Quorum sensing in water wastewater treatment biofilms. J Environ Biol 34:437
Firmani MA, Riley LW (2002) Mycobacterium tuberculosis CDC1551 is resistant to reactive nitrogen oxygen intermediates in vitro. Infect Immun 70:3965–3968. https://doi.org/10.1128/IAI.70.7.3965-3968.2002
Flemming HC, Wingender J, Szewzyk U, Steinberg P, Rice SA, Kjelleberg S (2016) Biofilms: an emergent form of bacterial life. Nat Rev Microbiol 14:563–575. https://doi.org/10.1038/nrmicro.2016.94
Ghosh S, Qureshi A, Purohit HJ (2017a) Biofilm microenvironments: understanding through modelling approaches. In: Purohit HJ et al (eds) Optimisation and applicability of bioprocess. Springer Nature, Singapore, pp 305–322. https://doi.org/10.1007/978-981-10-6863-8_15
Ghosh S, Qureshi A, Purohit HJ (2017b) Enhanced expression of catechol 1,2 dioxygenase gene in biofilm forming Pseudomonas mendocina EGD-AQ5 under increasing benzoate stress. Int Biodeterior Biodegrad 118:57–65. https://doi.org/10.1016/j.ibiod.2017.01.019
Grobbler C, Virdis B, Nouwens A, Harnisch F, Rabaey K, Bond PL (2015) Use of SWATH mass spectrometry for quantitative proteomic investigation of Shewanellaoneidensis MR-1 biofilms grown on graphite cloth electrodes. Sys Appl Microbiol 38:135–139
Gittens JE, Smith TJ, Suleiman R, Akid R (2013) Current emerging environmentally-friendly systems for fouling control in the marine environment. Biotechnol adv 31:1738–1753. https://doi.org/10.1016/j.biotechadv.2013.09.002
Glass EM, Wilkening J, Wilke A, Antonopoulos D, Meyer F (2010) Using the metagenomics RAST server (MG-RAST) for analyzing shotgun metagenomes. Cold Spring Harb Protoc 1:5368
Gomez-Alvarez V, Revetta RP, Santo Domingo JW (2012) Metagenome analyses of corroded concrete wastewater pipe biofilms reveal a complex microbial system. BMC Microbiol 12:122. https://doi.org/10.1186/1471-2180-12-122
Gulhane M, Khardenavis AA, Karia S, Pandit P, Kanade GS, Lokhande S, Vaidya AN, Purohit HJ (2016) Biomethanation of vegetable market waste in an anaerobic baffled reactor: effect of effluent recirculation and carbon mass balance analysis. Bioresour Technol 215:100–109
Guo Z, Xie C, Zhang P, Zhang J, Wang G, He X, Ma Y, Zhao B, Zhang Z (2017) Toxicity and transformation of graphene oxide and reduced graphene oxide in bacteria biofilm. Science Total Environ 580:1300–1308
Hall-Stoodley L, Costerton JW, Stoodley P (2004) Bacterial biofilms: from the natural environment to infectious diseases. Nat Rev Microbiol 2:95–108. https://doi.org/10.1038/nrmicro821
Harrison F, Buckling A (2009) Siderophore production and biofilm formation as linked social traits. ISME J 3:632
Heidelberg JF, Eisen JA, Nelson WC, Clayton RA, Gwinn ML, Dodson RJ, Haft DH, Hickey EK, Peterson JD, Umayam L, Gill SR (2000) DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae. Nature 406:477–483. https://doi.org/10.1038/35020000
Herzberg M, Elimelech M (2008) Physiology genetic traits of reverse osmosis membrane biofilms: a case study with Pseudomonas aeruginosa. ISME J 2:180–194. https://doi.org/10.1038/ismej.2007
Hess P, Villacorte LO, Dixon MB, Boerlage SF, Anderson DM, Kennedy MD, Schippers JC (2017) Harmful algal blooms (HABs) and desalination: a guide to impacts, monitoring and management. UNESCO. http://archimer.ifremer.fr/doc/00407/5183/52438.pdf
Hibbs MR, McGrath LK, Kang S, Adout A, Altman SJ, Elimelech M, Cornelius CJ (2016) Designing a biocidal reverse osmosis membrane coating: synthesis biofouling properties. Desalination 380:52–59. https://doi.org/10.1016/j.desal.2015.11.017
Hong SH, Hegde M, Kim J, Wang X, Jayaraman A, Wood TK (2012) Synthetic quorum-sensing circuit to control consortial biofilm formation dispersal in a microfluidic device. Nat Commun 3:613. https://doi.org/10.1038/ncomms1616
Huang S, Voutchkov N, Jiang SC (2013) Investigation of environmental influences on membrane biofouling in a Southern California desalination pilot plant. Desalination 319:1–9
Humphries J, Xiong L, Liu J, Prindle A, Yuan F, Arjes HA, Tsimring L, Süel GM (2017) Species-independent attraction to biofilms through electrical signaling. Cell 168:200–209. https://doi.org/10.1016/j.cell.2016.12.014
Intelligence GW, DesalData. com. (2017). http://www.desaldata.com/
ISAAC: Imaging Spectroscopy Analysis Centre (2006) Biofilms: a major scourge. The University of Glasgow, charity number SC00440. http://www.gla.ac.uk/media/media_244370_en.pdf
Janssen PJ, Van Houdt R, Moors H, Monsieurs P, Morin N, Michaux A, Benotmane MA, Leys N, Vallaeys T, Lapidus A, Monchy S (2010) The complete genome sequence of Cupriavidus metallidurans strain CH34, a master survivalist in harsh anthropogenic environments. PLoS One. https://doi.org/10.1371/journal.pone.0010433
Javaux EJ, Marshall CP, Bekker A (2010) Organic-walled microfossils in 3.2-billion-year-old shallow-marine siliciclastic deposits. Nature 463:934
Jeong S, Naidu G, Vigneswaran S (2013) Submerged membrane adsorption bioreactor as a pretreatment in seawater desalination for biofouling control. Bioresour Technol 141:57–64. https://doi.org/10.1016/j.biortech.2013.01.021
Jiang S, Li Y, Ladewig BP (2017) A review of reverse osmosis membrane fouling and control strategies. Sci Total Environ 595:567–583
Johansen C, Falholt P, Gram L (1997) Enzymatic removal and disinfection of bacterial biofilms. Appl Environ Microbiol 63:3724–3728
Kalia VC (2013) Quorum sensing inhibitors: an overview. Biotechnol Adv 31:224–245. https://doi.org/10.1016/j.biotechadv.2012.10.004
Kalia VC, Purohit HJ (2011) Quenching the quorum sensing system: potential antibacterial drug targets. Crit Rev Microbiol 37:121–140. https://doi.org/10.3109/1040841X.2010.532479
Katebian L, Gomez E, Skillman L, Li D, Ho G, Jiang SC (2016) Inhibiting quorum sensing pathways to mitigate seawater desalination RO membrane biofouling. Desalination 393:135–143
Kim SR, Oh HS, Jo SJ, Yeon KM, Lee CH, Lim DJ, Lee CH, Lee JK (2013) Biofouling control with bead-entrapped quorum quenching bacteria in membrane bioreactors: physical biological effects. Environ Sci Technol 47:836–842. https://doi.org/10.1021/es303995s
Kiyokawa S, Ito T, Ikehara M, Kitajima F (2006) Middle Archean volcano-hydrothermal sequence: bacterial microfossil-bearing 3.2 Ga Dixon Island Formation, coastal Pilbara terrane, Australia. Geol Soc Am Bull 118:3–22. https://doi.org/10.1130/B25748.1
Koo H, Allan RN, Howlin RP, Stoodley P, Hall-Stoodley L (2017) Targeting microbial biofilms: current and prospective therapeutic strategies. Nat Rev Microbiol 15:740
Kristensen JB, Meyer RL, Laursen BS, Shipovskov S, Besenbacher F, Poulsen CH (2008) Antifouling enzymes the biochemistry of marine settlement. Biotechnol Adv 26:471–481. https://doi.org/10.1016/j.biotechadv.2008.05.005
Kriwy P, Uthicke S (2011) Microbial diversity in marine biofilms along a water quality gradient on the Great Barrier Reef. Syst Appl Microbiol 34:116–126
Kusić D, Rösch P, Popp J (2016) Fast label-free detection of Legionella spp. in biofilms by applying immunomagneticbeads Raman spectroscopy. Syst Appl Microbiol 39:132–140
Lade H, Paul D, Kweon JH (2014) N-acyl homoserine lactone-mediated quorum sensing with special reference to use of quorum quenching bacteria in membrane biofouling control. BioMed Res Int. https://doi.org/10.1155/2014/162584
Lakshmi DS, Jaiswar S, Tasselli F, Raval HD (2017) Preparation and performance of biofouling resistant PAN/chitosan hollow fiber membranes. 3 Biotech 7:224
Leary DH, Li RW, Hamdan LJ, Hervey IVWJ, Lebedev N, Wang Z, Deschamps JR, Kusterbeck AW, Vora GJ (2014) Integrated metagenomic metaproteomic analyses of marine biofilm communities. Biofouling 30:1211–1223. https://doi.org/10.1080/08927014.2014.977267
Lee SH, Lee S, Lee K, Nahm CH, Kwon H, Oh HS, Won YJ, Choo KH, Lee CH, Park PK (2016) More efficient media design for enhanced biofouling control in a membrane bioreactor: quorum quenching bacteria entrapping hollow cylinder. Environ Sci Technol 50:8596–8604. https://doi.org/10.1021/acs.est.6b01221
Li XL (2013) Conditions favouring growth of fresh water biofouling in hydraulic canals the impact of biofouling on pipe flows. Doctoral dissertation, University of Tasmania
Li S, Sinha S, Leiknes T, Amy GL, Ghaffour N (2016) Evaluation of potential particulate/colloidal TEP foulants on a pilot scale SWRO desalination study. Desalination 393:127–134. https://doi.org/10.1016/j.desal.2016.01.017
Liao YC, Huang TW, Chen FC, Charusanti P, Hong JS, Chang HY, Tsai SF, Palsson BO, Hsiung CA (2011) An experimentally validated genome-scale metabolic reconstruction of Klebsiella pneumoniae MGH 78578, iYL1228. J Bacteriol 193:1710–1717. https://doi.org/10.1128/JB.01218-10
Lindner E (1992) A low surface free energy approach in the control of marine biofouling. Biofouling 6:193–205
Liu X, Tang B, Gu Q, Yu X (2014) Elimination of the formation of biofilm in industrial pipes using enzyme cleaning technique. MethodsX 1:130–136. https://doi.org/10.1016/j.mex.2014.08.008
Liu S, Fang F, Wu J, Zhang K (2015) The anti-biofouling properties of thin-film composite nanofiltration membranes grafted with biogenic silver nanoparticles. Desalination 375:121–128. https://doi.org/10.1016/j.desal.2015.08.007
Logan BE (2017) The global challenge of sustainable seawater desalination. Environ Sci Technol Lett. https://doi.org/10.1021/acs.estlett.7b00167
Majumdar S, Pal S (2017) Cross-species communication in bacterial world. J Cell Commun Signal 11:187. https://doi.org/10.1007/s12079-017-0383-9
Malaeb L, Le-Clech P, Vrouwenvelder JS, Ayoub GM, Saikaly PE (2013) Do biological-based strategies hold promise to biofouling control in MBRs? Water Res 47:5447–5463
Matin A, Khan Z, Gleason KK, Khaled M, Zaidi SMJ, Khalil A, Moni P, Yang R (2014) Surface-modified reverse osmosis membranes applying a copolymer film to reduce adhesion of bacteria as a strategy for biofouling control. Sep Purif Technol 124:117–123. https://doi.org/10.1016/j.seppur.2013.12.032
McLean JS, Lombardo MJ, Ziegler MG, Novotny M, Yee-Greenbaum J, Badger JH, Tesler G, Nurk S, Lesin V, Brami D, Hall AP (2013) Genome of the pathogen Porphyromonas gingivalis recovered from a biofilm in a hospital sink using a high-throughput single-cell genomics platform. Genome Res 23:867–877. https://doi.org/10.1101/gr.150433.112
Miller DJ, Araujo PA, Correia PB, Ramsey MM, Kruithof JC, van Loosdrecht MC, Freeman BD, Paul DR, Whiteley M, Vrouwenvelder JS (2012) Short-term adhesion long-term biofouling testing of polydopamine poly (ethylene glycol) surface modifications of membranes feed spacers for biofouling control. Water Res 46:3737–3753. https://doi.org/10.1016/j.watres.2012.03.058
Nagaraja N, Skillman L, Xie Z, Jiang S, Ho G, Li D (2017) Investigation of compounds that degrade biofilm polysaccharides on reverse osmosis membranes from a full scale desalination plant to alleviate biofouling. Desalination 403:88–96. https://doi.org/10.1016/j.desal.2016.06.002
Nguyen T, Roddick FA, Fan L (2012) Biofouling of water treatment membranes: a review of the underlying causes, monitoring techniques control measures. Membranes 2:804–840. https://doi.org/10.3390/membranes2040804
Nobile CJ, Fox EP, Nett JE, Sorrells TR, Mitrovich QM, Hernday AD, Tuch BB, Andes DR Johnson AD (2012) A recently evolved transcriptional network controls biofilm development in Candida albicans. Cell 148:126–138. https://doi.org/10.1016/j.cell.2011.10.048
Ochiai H, Inoue Y, Takeya M, Sasaki A, Kaku H (2005) Genome sequence of Xanthomonas oryzae pv. oryzae suggests contribution of large numbers of effector genes insertion sequences to its race diversity. Jpn Agric Res Quart JARQ 39:275–287. https://doi.org/10.6090/jarq.39.275
Oh HS, Yeon KM, Yang CS, Kim SR, Lee CH, Park SY, Han JY, Lee JK (2012) Control of membrane biofouling in MBR for wastewater treatment by quorum quenching bacteria encapsulated in microporous membrane. Environ Sci Technol 46:4877–4884. https://doi.org/10.1021/es204312u
Olson BH (1984) Evaluation of cleaning strategies for removal of biofilms from reverse-osmosis membranes. Appl Environ Microbiol 48:395–403
Ong CS, Goh PS, Lau WJ, Misdan N, Ismail AF (2016) Nanomaterials for biofouling scaling mitigation of thin film composite membrane: a review. Desalination 393:2–15. https://doi.org/10.1016/j.desal.2016.01.007
Overbeek R, Olson R, Pusch GD, Olsen GJ, Davis JJ, Disz T, Edwards RA, Gerdes S, Parrello B, Shukla M, Vonstein V (2013) The SEED the rapid annotation of microbial genomes using subsystems technology (RAST). Nucleic Acids Res 42:206–214
Pal S, Qureshi A, Purohit HJ (2016) Antibiofilm activity of biomolecules: gene expression study of bacterial isolates from brackish fresh water biofouled membranes. Biologia 71:239–246. https://doi.org/10.1515/biolog-2016-0045
Percival SL, Suleman L, Vuotto C, Donelli G (2015) Healthcare-associated infections, medical devices and biofilms: risk, tolerance and control. J Med Microbiol 64:323–334
Perkins KJ, Rewartha JM, McMinn A, Cook SS, Hallegraeff GM (2010) Succession physiological health of freshwater microalgal fouling in a Tasmanian hydropower canal. Biofouling 26:637–644. https://doi.org/10.1080/08927014.2010.506610
Piyadasa C, Ridgway HF, Yeager TR, Stewart MB, Pelekani C, Gray SR, Orbell JD (2017) The application of electromagnetic fields to the control of the scaling biofouling of reverse osmosis membranes—a review. Desalination 418:19–34. https://doi.org/10.1016/j.desal.2017.05.017
Powell LC, Hilal N, Wright CJ (2017) Atomic force microscopy study of the biofouling mechanical properties of virgin industrially fouled reverse osmosis membranes. Desalination 404:313–321. https://doi.org/10.1016/j.desal.2016.11.010
Qu X, Alvarez PJ, Li Q (2013) Applications of nanotechnology in water wastewater treatment. Water Res 47:3931–3946. https://doi.org/10.1016/j.watres.2012.09.058
Qureshi A, Smita P, Saheli G, Atya K, Purohit HJ (2015) Antibiofouling biomaterials. Int J Recent Adv Multidiscip Res 2:677–684
Rasmussen B (2000) Filamentous microfossils in a 3,235-million-year-old volcanogenic massive sulphide deposit. Nature 405:676. https://doi.org/10.1038/35015063
Read TD, Peterson SN, Tourasse N, Baillie LW, Paulsen IT, Nelson KE, Tettelin H, Fouts DE, Eisen JA, Gill SR, Holtzapple EK (2003) The genome sequence of Bacillus anthracis Ames comparison to closely related bacteria. Nature 423:81–86. https://doi.org/10.1038/nature01590
Rosenhahn A, Schilp S, Kreuzer HJ, Grunze M (2010) The role of “inert” surface chemistry in marine biofouling prevention. Phys Chem Chem Phys 12:4275–4286
Saeki D, Karkhanechi H, Matsuura H, Matsuyama H (2016) Effect of operating conditions on biofouling in reverse osmosis membrane processes: bacterial adhesion, biofilm formation, permeate flux decrease. Desalination 378:74–79. https://doi.org/10.1016/j.desal.2015.09.020
Sikorski J, Lapidus A, Chertkov O, Lucas S, Copel A, Del Rio TG, Nolan M, Tice H, Cheng JF, Han C, Brambilla E (2010) Complete genome sequence of Acetohalobium arabaticum type strain (Z-7288 T). Stards Genom Sci 3:57. https://doi.org/10.4056/sigs.1062906
Soumya KR, Philip S, Sugathan S, Mathew J, Radhakrishnan EK (2017) Virulence factors associated with coagulase negative Staphylococci isolated from human infections. 3 Biotech 7:140
Starling S (2017) Biofilms: communities in sync. Nat Rev Microbiol. https://doi.org/10.1038/nrmicro.2017.46
Stover CK, Pham XQ, Erwin AL, Mizoguchi SD, Warrener P, Hickey MJ, Brinkman FSL, Hufnagle WO, Kowalik DJ, Lagrou M, Garber RL (2000) Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen. Nature 406:959–964. https://doi.org/10.1038/35023079
Strnad H, Ridl J, Paces J, Kolar M, Vlcek C, Paces V (2011) Complete genome sequence of the haloaromatic acid-degrading bacterium Achromobacter xylosoxidans A8. J Bacteriol 193:791–792. https://doi.org/10.1128/JB.01299-10
Suzuki T, Okamura Y, Calugay RJ, Takeyama H, Matsunaga T (2006) Global gene expression analysis of iron-inducible genes in Magnetospirillum magneticum AMB-1. J Bacteriol 188:2275–2279. https://doi.org/10.1128/JB.188.6.2275-2279.2006
Swarupa V, Chaudhury A, Sarma PVGK (2018) Iron enhances the peptidyl deformylase activity and biofilm formation in Staphylococcus aureus. 3Biotech 8:32
Szklarczyk D, Franceschini A, Wyder S, Forslund K, Heller D, Huerta-Cepas J, Simonovic M, Roth A, Santos A, Tsafou KP, Kuhn M (2014) STRING v10: protein–protein interaction networks, integrated over the tree of life. Nucleic Acids Res 43:D447–D452
Tremblay J, Déziel E (2010) Gene expression in Pseudomonas aeruginosa swarming motility. BMC Genom 11:587. https://doi.org/10.1186/1471-2164-11-587
Villacorte LO (2014) Algal blooms and membrane based desalination technology. UNESCO-IHE, Institute for Water Education, Delft
Wahl M, Goecke F, Labes A, Dobretsov S, Weinberger F (2012) The second skin: ecological role of epibiotic biofilms on marine organisms. Front Microbiol. https://doi.org/10.3389/fmicb.2012.00292
Wang J, Ding L, Li K, Huang H, Hu H, Geng J, Xu K, Ren H (2018) Estimation of spatial distribution of quorum sensing signaling in sequencing batch biofilm reactor (SBBR) biofilms. Sci Total Environ 612:405–414
Weerasekara NA, Choo KH, Lee CH (2016) Biofouling control: bacterial quorum quenching versus chlorination in membrane bioreactors. Water Res 103:293–301. https://doi.org/10.1016/j.watres.2016.07.049
Wei J, Goldberg MB, Burl V, Venkatesan MM, Deng W, Fournier G, Mayhew GF, Plunkett GIII, Rose DJ, Darling A, Mau B (2003) Complete genome sequence comparative genomics of Shigella flexneri serotype 2a strain 2457T. Infect Immun 71:2775–2786. https://doi.org/10.1128/IAI.71.5.2775-2786.2003
Whittaker C, Ridgway H, Olson BH (1984) Evaluation of cleaning strategies for removal of biofilms from reverse-osmosis membranes. Appl Environ Microbiol 48:395–403
Wood TL, Guha R, Tang L, Geitner M, Kumar M, Wood TK (2016) Living biofouling-resistant membranes as a model for the beneficial use of engineered biofilms. Proc Natl Acad Sci 113:E2802–E2811. https://doi.org/10.1073/pnas
Xia S, Li J, He S, Xie K, Wang X, Zhang Y, Duan L, Zhang Z (2010) The effect of organic loading on bacterial community composition of membrane biofilms in a submerged polyvinyl chloride membrane bioreactor. Bioresour Technol 101:6601–6609. https://doi.org/10.1016/j.biortech.2010.03.082
Yang Y, Kitajima M, Pham TPT, Yu L, Ling R, Gin KYH, Reinhard M (2016) Using Pseudomonas aeruginosa PAO1 to evaluate hydrogen peroxide as a biofouling control agent in membrane treatment systems. Lett Appl Microbiol 63:488–494. https://doi.org/10.1111/lam.12674
Yergeau E, Lawrence JR, Waiser MJ, Korber DR, Greer CW (2010) Metatranscriptomic analysis of the response of river biofilms to pharmaceutical products, using anonymous DNA microarrays. Appl Environ Microbiol 76:5432–5439. https://doi.org/10.1128/AEM.00873-10
Yoon H, Baek Y, Yu J, Yoon J (2013) Biofouling occurrence process its control in the forward osmosis. Desalination 325:30–36. https://doi.org/10.1016/j.desal.2013.06.018
York A (2017) Biofilms: shocking biofilms. Nat Rev Microbiol 15:132–133. https://doi.org/10.1038/nrmicro.2017.6
Zhao Y, Xiong X, Wu C, Xia Y, Li J, Wu Y (2018) Influence of light and temperature on the development and denitrification potential of periphytic biofilms. Sci Total Environ 613:1430–1437
Acknowledgements
The authors wish to thank CSIR NEERI (KRC/EBGD/2017), ESC0306 Clean Water; Sustainable Options: 12th plan CSIR network project and DST/TM/WTI/2k15/225(G)-B/2, AcSIR and DST Inspire Fellowship for financial support. Funding was provided by Department of Science and Technology, India.
Author information
Authors and Affiliations
Corresponding author
Ethics declarations
Conflict of interest
All the authors declare that they have no conflict of interest.
Electronic supplementary material
Below is the link to the electronic supplementary material.
13205_2018_1383_MOESM1_ESM.tif
Supplementary figure 1: Gluey attachment of membrane biofouling bacterial isolate (Enterobacterasburiae EGD_AQ_BF12) with substratum showing clumsy thick cell mass and protruding threadlike EPS bound cells in the liquid (TIF 896 KB)
13205_2018_1383_MOESM2_ESM.tif
Supplementary figure 2: Heat map of quorum signal related genomic components from environmental and pathogenic biofilm genomes. Comparative frequency abundance followed by multivariate clustering visualization (TIF 220 KB)
13205_2018_1383_MOESM3_ESM.jpg
Supplementary figure 3: Insilico Protein network visualization of representative environmental Enterobacter asburiae EGD_AQ_BF12 biofilm and signal regulating elements, showing siderophore formation in a cluster. where,1: proteins associated with cell signalling; including signalling peptide type I and II, autoinducers, Twist Arginine motifs and chemical signalling, 2: Biofilm proteins, 3: siderophore formation proteins, 4: Motility and chemotactic proteins, 5: Drug resistance proteins, 6: osmoregulatory proteins (JPG 63 KB)
Rights and permissions
About this article
Cite this article
Pal, S., Qureshi, A. & Purohit, H.J. Intercepting signalling mechanism to control environmental biofouling. 3 Biotech 8, 364 (2018). https://doi.org/10.1007/s13205-018-1383-z
Received:
Accepted:
Published:
DOI: https://doi.org/10.1007/s13205-018-1383-z