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Factors Controlling Phytoplankton Biomass in a Subtropical Coastal Lagoon: Relative Scales of Influence

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Abstract

Patterns in phytoplankton biomass are essential to understanding estuarine ecosystem structure and function and are the net result of various gain and loss processes. In this study, patterns in phytoplankton biomass were explored in relation to a suite of potentially regulating factors in a well-flushed, subtropical lagoon, the Matanzas River Estuary (MRE) in northeast Florida. We examined temporal variability in water temperature, light availability, nutrient concentrations, phytoplankton productivity, and phytoplankton standing stock over 8 years (2003–2010) and explored relationships among variables through correlation analysis. Laboratory experiments in the spring and summer of 2009 quantified phytoplankton growth rates, nutrient limitation potential, and zooplankton grazing rates. The potential influence of oyster grazing was also examined by scaling up population metrics and filtration rate estimates. Results indicated that phytoplankton biomass in the study area was relatively low mainly due to a combination of low temperature and light availability in the winter and consistent tidal water exchange and bivalve grazing throughout the year. Relatively low levels of phytoplankton standing stock and small inter-annual variability within the MRE reflect a balance between gain and loss processes which provide a degree of resilience of the system to natural and anthropogenic influences.

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References

  • Abreu, P.C., M. Bergesch, L.A. Proença, C.A.E. Garcia, and C. Odebrecht. 2010. Short- and long-term chlorophyll a variability in the shallow microtidal Patos Lagoon estuary, Southern Brazil. Estuaries and Coasts 33: 554–569.

    Article  CAS  Google Scholar 

  • Adamus, C., D. Clapp, and S. Brown. 1997. Surface water drainage basin boundaries St. Johns River Water Management District: A reference guide. Technical publication SJ97-1. Palatka: St. Johns River Water Management District.

    Google Scholar 

  • APHA (American Public Health Association). 1998. Standard methods for the examination of water and wastewater, 20th ed. Baltimore: United Book.

    Google Scholar 

  • Badylak, S., and E.J. Phlips. 2008. Spatial and temporal distributions of zooplankton in Tampa Bay, Florida, including observations during a HAB event. Journal of Plankton Research 30: 449–465.

    Article  Google Scholar 

  • Bledsoe, E.L., E.J. Phlips, C.E. Jett, and K.A. Donnelly. 2004. The relationships among phytoplankton biomass, nutrient loading and hydrodynamics in an inner-shelf estuary. Ophelia 58: 29–47.

    Article  Google Scholar 

  • Borrero, F.J. 1987. Tidal height and gametogenesis: reproductive variation among populations of Geukensia demissa. The Biological Bulletin 173: 160–168.

    Article  Google Scholar 

  • Boudreaux, M.L., J.L. Stiner, and L.J. Walters. 2006. Biodiversity of sessile and motile macrofauna on intertidal oyster reefs in Mosquito Lagoon, Florida. Journal of Shellfish Research 25: 1079–1089.

    Google Scholar 

  • Boynton, W.R., W.M. Kemp, and C.W. Keefe. 1982. A comparative analysis of nutrients and other factors influencing estuarine phytoplankton production. In Estuarine comparisons, ed. V. Kennedy, 69–90. New York: Academic.

    Google Scholar 

  • Chen, E., and J.F. Gerber. 1990. Climate. In Ecosystems of Florida, ed. R.L. Meyers and J.J. Ewel, 11–34. Orlando: University of Central Florida Press.

    Google Scholar 

  • Cloern, J.E. 1982. Does the benthos control phytoplankton biomass in South San Francisco Bay? Marine Ecology Progress Series 9: 191–202.

    Article  Google Scholar 

  • Cloern, J.E. 1996. Phytoplankton bloom dynamics in coastal ecosystems: a review with some general lessons from sustained investigation of San Francisco Bay, California. Reviews of Geophysics 34: 127–168.

    Article  CAS  Google Scholar 

  • Cloern, J.E. 2001. Our evolving conceptual model of the coastal eutrophication problem. Marine Ecology Progress Series 210: 223–253.

    Article  CAS  Google Scholar 

  • Cloern, J.E., and A.D. Jassby. 2008. Complex seasonal patterns of primary producers at the land–sea interface. Ecology Letters 11: 1294–1303.

    Article  Google Scholar 

  • Cloern, J.E., and A.D. Jassby. 2010. Patterns and scales of phytoplankton variability in estuarine–coastal ecosystems. Estuaries and Coasts 33: 230–241.

    Article  CAS  Google Scholar 

  • Cole, B.E., and J.E. Cloern. 1987. An empirical model for estimating phytoplankton productivity in estuaries. Marine Ecology Progress Series 38: 299–305.

    Article  Google Scholar 

  • Cressman, K.A., M.H. Posey, M.A. Mallin, L.A. Leonard, and T.D. Alphin. 2003. Effects of oyster reefs on water quality in a tidal creek estuary. Journal of Shellfish Research 22: 753–762.

    Google Scholar 

  • Dame, R.F. 1996. Ecology of marine bivalves: an ecosystem approach. Boca Raton: CRC.

    Book  Google Scholar 

  • Dame, R., N. Dankers, T. Prins, H. Jongsma, and A. Smaal. 1991. The influence of mussel beds on nutrients in the Western Wadden Sea and Eastern Scheldt Estuaries. Estuaries 14: 130–138.

    Article  CAS  Google Scholar 

  • Dame, R.F., R.G. Zingmark, and E. Haskin. 1984. Oyster reefs as processors of estuarine materials. Journal of Experimental Marine Biology and Ecology 83: 239–247.

    Article  CAS  Google Scholar 

  • Dame, R., R. Zingmark, H. Stevenson, and D. Nelson. 1980. Filter feeder coupling between the estuarine water column and benthic subsystems. In Estuarine perspectives, ed. V.S. Kennedy, 521–526. New York: Academic.

    Google Scholar 

  • Dame, R.F., and T.C. Prins. 1998. Bivalve carrying capacity in coastal ecosystems. Aquatic Ecology 31: 409–421.

    Article  Google Scholar 

  • Day, J.W., C.A.S. Hall, W.M. Kemp, and A. Yáñez-Arancibia. 1989. Estuarine ecology. New York: Wiley.

    Google Scholar 

  • Dix, N.G. 2010. Nutrient, phytoplankton, and oyster dynamics in a highly flushed subtropical lagoon, northeast Florida. Dissertation. University of Florida, Gainesville, FL.

  • Dix, N.G., E.J. Phlips, and R.A. Gleeson. 2008. Water quality changes in the Guana Tolomato Matanzas National Estuarine Research Reserve, Florida, associated with four tropical storms. Journal of Coastal Research 55(SI): 26–37.

    Article  CAS  Google Scholar 

  • Doering, P.H., and C.A. Oviatt. 1986. Application of filtration rate models to field populations of bivalves: an assessment using experimental mesocosms. Marine Ecology Progress Series 31: 265–275.

    Article  Google Scholar 

  • Eppley, R.W. 1972. Temperature and phytoplankton growth in the sea. Fisheries Bulletin 70: 1063–1085.

    Google Scholar 

  • Eyre, B.D. 2000. Regional evaluation of nutrient transformation and phytoplankton growth in nine river-dominated sub-tropical east Australian estuaries. Marine Ecology Progress Series 205: 61–83.

    Article  CAS  Google Scholar 

  • Fahnenstiel, G.L., M.J. McCormick, G.A. Lang, D.G. Redalje, S.E. Lohrenz, M. Markowitz, B. Wagoner, and H.J. Carrick. 1995. Taxon-specific growth and loss rates for dominant phytoplankton populations from the northern Gulf of Mexico. Marine Ecology Progress Series 117: 229–239.

    Article  Google Scholar 

  • Geddes, M.C. 1984. Limnology of Lake Alexandrina, River Murray, South Australia and the effects of nutrients and light on the phytoplankton. Australian Journal of Marine & Freshwater Research 35: 399–415.

    Article  CAS  Google Scholar 

  • Glibert, P.M., and J.M. Burkholder. 2006. The complex relationships between increases in fertilization of the earth, coastal eutrophication and proliferation of harmful algal blooms. In Ecology of harmful algae, ed. E. Granéli and J.T. Turner, 341–354. Berlin: Springer.

    Chapter  Google Scholar 

  • Goldman, J.C. 1979. Temperature effects on steady-state growth, phosphorus uptake, and the chemical composition of a marine phytoplankton. Microbial Ecology 5: 153–166.

    Article  CAS  Google Scholar 

  • Jassby, A.D., J.E. Cloern, and B.E. Cole. 2002. Annual primary production: patterns and mechanisms of change in a nutrient-rich tidal ecosystem. Limnology and Oceanography 47: 698–712.

    Article  Google Scholar 

  • Jenab, S.A., D.V. Rao, and D. Clapp. 1986. Rainfall analysis for northeast Florida. Part II: summary of monthly and annual rainfall data. Technical Publication SJ 86-4. Palatka: St. Johns River Water Management District.

    Google Scholar 

  • Juhl, A.R., and M.C. Murrell. 2005. Interactions between nutrients, phytoplankton growth, and microzooplankton grazing in a Gulf of Mexico estuary. Aquatic Microbial Ecology 38: 147–156.

    Article  Google Scholar 

  • Kemp, W.M., W.R. Boynton, J.E. Adolf, D.F. Boesch, W.C. Boicourt, G. Brush, J.C. Cornwell, T.R. Fisher, P.M. Glibert, J.D. Hagy, L.W. Harding, E.D. Houde, D.G. Kimmel, W.D. Miller, R.I.E. Newell, M.R. Roman, E.M. Smith, and J.C. Stevenson. 2005. Eutrophication of Chesapeake Bay: historical trends and ecological interactions. Marine Ecology Progress Series 303: 1–29.

    Article  Google Scholar 

  • Knoppers, B. 1994. Aquatic primary production in coastal lagoons. In Coastal lagoon processes, ed. B. Kjerfve, 243–286. Amsterdam: Elsevier.

    Chapter  Google Scholar 

  • Knoppers, B., B. Kjerfve, and J.P. Carmouze. 1991. Trophic state and water turn-over time in six choked coastal lagoons in Brazil. Biogeochemistry 16: 149–166.

    Google Scholar 

  • Knowles, L. 1995. Rainfall and freshwater discharge in the Indian River Basin within the St. Johns River Water Management District, East-Central Florida, 1989–91. Water Resources Investigation Report 94-4193. Tallahassee: U.S. Geological Survey.

    Google Scholar 

  • Lakowicz, J.R. 1983. Principles of fluorescence spectroscopy. New York: Plenum.

    Book  Google Scholar 

  • Landry, M.R., and R.P. Hassett. 1982. Estimating the grazing impact of marine micro-zooplankton. Marine Biology 67: 283–288.

    Article  Google Scholar 

  • Lehrter, J.C. 2008. Regulation of eutrophication susceptibility in oligohaline regions of a northern Gulf of Mexico estuary, Mobile Bay, Alabama. Marine Pollution Bulletin 56: 1446–1460.

    Article  CAS  Google Scholar 

  • Lehrter, J.C., J.R. Pennock, and G.B. McManus. 1999. Microzooplankton grazing and nitrogen excretion across a surface estuarine–coastal interface. Estuaries 22: 113–125.

    Article  CAS  Google Scholar 

  • Liu, H., and M. Dagg. 2003. Interactions between nutrients, phytoplankton growth, and micro- and mesozooplankton grazing in the plume of the Mississippi River. Marine Ecology Progress Series 258: 31–42.

    Article  CAS  Google Scholar 

  • Lucas, L.V., J.R. Koseff, J.E. Cloern, S.G. Monismith, and J.K. Thompson. 1999a. Processes governing phytoplankton blooms in estuaries. I: The local production-loss balance. Marine Ecology Progress Series 187: 1–15.

    Article  Google Scholar 

  • Lucas, L.V., J.R. Koseff, S.G. Monismith, J.E. Cloern, and J.K. Thompson. 1999b. Processes governing phytoplankton blooms in estuaries. II: The role of horizontal transport. Marine Ecology Progress Series 187: 17–30.

    Article  Google Scholar 

  • Mathews, A. L. 2013. Phytoplankton production and dynamics in the Caloosahatchee Estuary, Florida, USA. Dissertation. University of Florida, Gainesville, FL.

  • Miller, J.D. 2004. Status and trends of water quality in the Northern Coastal Basin. Palatka: St. Johns River Water Management District.

    Google Scholar 

  • Monbet, Y. 1992. Control of phytoplankton biomass in estuaries: a comparative analysis of microtidal and macrotidal estuaries. Estuaries 15: 563–571.

    Article  CAS  Google Scholar 

  • Mortazavi, B., R.L. Iverson, W.M. Landing, F.G. Lewis, and W. Huang. 2000. Control of phytoplankton production and biomass in a river-dominated estuary: Apalachicola Bay, Florida, USA. Marine Ecology Progress Series 198: 19–31.

    Article  Google Scholar 

  • Murrell, M.C., J.D. Hagy III, E.M. Lores, and R.M. Greene. 2007. Phytoplankton production and nutrient distributions in a subtropical estuary: importance of freshwater flow. Estuaries and Coasts 30: 390–402.

    Article  Google Scholar 

  • Murrell, M.C., R.S. Stanley, E.M. Lores, G.T. DiDonato, and D.A. Flemer. 2002. Linkage between microzooplankton grazing and phytoplankton growth in a Gulf of Mexico estuary. Estuaries 25: 19–29.

    Article  Google Scholar 

  • NOAA (National Oceanic and Atmospheric Administration). 2010. Office of Ocean and Coastal Resource Management, National Estuarine Research Reserve System-wide Monitoring Program Centralized Data Management Office, Baruch Marine Field Lab, University of South Carolina. http://cdmo.baruch.sc.edu

  • Nixon, S.W. 1995. Coastal marine eutrophication: a definition, social causes, and future concerns. Ophelia 41: 199–219.

    Google Scholar 

  • NRC (National Research Council). 2000. Clean coastal waters: understanding and reducing the effects of nutrient pollution. Washington, DC: National Academy.

    Google Scholar 

  • Officer, C.B., T.J. Smayda, and R. Mann. 1982. Benthic filter feeding: a natural eutrophication control. Marine Ecology Progress Series 9: 203–210.

    Article  Google Scholar 

  • Oswald, W.J., and H.B. Gataas. 1957. Photosynthesis in sewage treatment. Transactions of the American Society of Engineers 122: 73–97.

    Google Scholar 

  • Pennock, J.R., J.N. Boyer, J.A. Herrera-Silveira, R.L. Iverson, T.E. Whitledge, B. Mortazavi, and F.A. Comin. 1999. Nutrient behavior and phytoplankton production in Gulf of Mexico estuaries. In Biogeochemistry of Gulf of Mexico estuaries, ed. T.S. Bianchi, J.R. Pennock, and R.R. Twilley, 109–162. USA: Wiley.

    Google Scholar 

  • Phlips, E.J., F.E. Aldridge, C.L. Schelske, and T.L. Crisman. 1995. Relationship between light availability, chlorophyll a and tripton in a large shallow sub-tropical lake. Limnology and Oceanography 40: 416–421.

    Article  CAS  Google Scholar 

  • Phlips, E.J., S. Badylak, M.C. Christman, and M.A. Lasi. 2010. Climatic trends and temporal patterns of phytoplankton composition, abundance, and succession in the Indian River Lagoon, Florida. Estuaries and Coasts 33: 498–512.

    Article  CAS  Google Scholar 

  • Phlips, E.J., S. Badylak, and T. Grosskopf. 2002. Factors affecting the abundance of phytoplankton in a restricted subtropical lagoon, the Indian River Lagoon, Florida, USA. Estuarine, Coastal and Shelf Science 55: 385–402.

    Article  CAS  Google Scholar 

  • Phlips, E.J., N. Love, S. Badylak, P. Hansen, J. Lockwood, C.V. John, and R. Gleeson. 2004. A comparison of water quality and hydrodynamic characteristics of the Guana Tolomato Matanzas National Estuarine Research Reserve and the Indian River Lagoon of Florida. Journal of Coastal Research 45: 93–109.

    Article  Google Scholar 

  • Pinckney, J., and R.G. Zingmark. 1993. Biomass and production of benthic microalgal communities in estuarine habitats. Estuaries 16: 887–897.

    Article  CAS  Google Scholar 

  • Putland, J.N., and R.L. Iverson. 2007. Microzooplankton: major herbivores in an estuarine planktonic food web. Marine Ecology Progress Series 345: 63–73.

    Article  CAS  Google Scholar 

  • Quinlan, E.L., C.H. Jett, and E.J. Phlips. 2009. Microzooplankton grazing and the control of phytoplankton biomass in the Suwannee River estuary, USA. Hydrobiologia 632: 127–137.

    Article  Google Scholar 

  • Redfield, A.C., B.H. Ketchum, and F.A. Richards. 1963. The influence of organisms on the composition of sea-water. In The sea, Vol. 2, The composition of sea-water comparative and descriptive oceanography, ed. M.N. Hill, 26–77. New York: Interscience.

    Google Scholar 

  • Reynolds, C.S. 2006. The ecology of freshwater plankton. Cambridge: Cambridge University Press.

    Google Scholar 

  • Riisgård, H.U. 1988. Efficiency of particle retention and filtration rate in 6 species of northeast American bivalves. Marine Ecology Progress Series 45: 217–223.

    Article  Google Scholar 

  • Sarthou, G., K.R. Timmermans, S. Blain, and P. Tréguer. 2005. Growth physiology and fate of diatoms in the ocean: a review. Journal of Sea Research 53: 25–42.

    Article  CAS  Google Scholar 

  • Sartory, D.P., and J.U. Grobbelaar. 1984. Extraction of chlorophyll a from freshwater phytoplankton for spectrophotometric analysis. Hydrobiologia 114: 177–187.

    Article  CAS  Google Scholar 

  • Schaeffer, B.A., J. Hagy, J. Lehrter, R. Conmy, and R. Stumpf. 2013. An approach to developing numeric water quality criteria for coastal waters using the SeaWiFS satellite data record. Environmental Science and Technology 46: 916–922.

    Google Scholar 

  • Sheng, Y.P., B. Tutak, J.R. Davis, and V. Paramygin. 2008. Circulation and flushing in the lagoonal system of the Guana Tolomato Matanzas National Estuarine Research Reserve (GTMNERR), Florida. Journal of Coastal Research 55: 9–25.

    Article  Google Scholar 

  • SJRWMD (St. Johns River Water Management District). 2006. SJRWMD land use and land cover, 2004. Palatka: SJRWMD.

    Google Scholar 

  • Smaal, A.C., and T.C. Prins. 1993. The uptake of organic matter and the release of inorganic nutrients by bivalve suspension feeder beds. In Bivalve filter feeders in estuarine and coastal ecosystem processes, ed. R. Dame, 271–298. New York: Springer.

    Chapter  Google Scholar 

  • Smetacek, V., and J.E. Cloern. 2008. On phytoplankton trends. Science 319: 1346–1348.

    Article  CAS  Google Scholar 

  • Stefan, H., T. Skoglund, and R.O. Megard. 1976. Wind control of algae growth in eutrophic lakes. Journal of the Environmental Engineering Division 102: 1201–1213.

    Google Scholar 

  • Stolte, W., and E. Garcés. 2006. Ecological aspects of harmful algal in situ population growth rates. In Ecology of harmful algae, ed. E. Granéli and J.T. Turner, 139–152. Germany: Springer.

    Chapter  Google Scholar 

  • Strickland, J.D.H., and T.R. Parsons. 1972. A practical handbook of seawater analysis: determination of ammonia (oxidation method). Fisheries Research Board of Canada, Ottawa, Canada, pp. 9–14.

  • Tester, P.A., R.P. Stumpf, F.M. Vukovich, P.K. Fowler, and J.T. Turner. 1991. An expatriate red tide bloom: transport, distribution, and persistence. Limnology and Oceanography 42: 1203–1214.

    Google Scholar 

  • Zingone, A., E.J. Phlips, and P.J. Harrison. 2010. Multiscale variability of twenty-two coastal phytoplankton time series: a global scale comparison. Estuaries and Coasts 33: 224–229.

    Article  CAS  Google Scholar 

  • Zingone, A., and H. Oksfeldt Enevoldsen. 2000. The diversity of harmful algal blooms: a challenge for science and management. Ocean and Coastal Management 43: 725–748.

    Article  Google Scholar 

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Acknowledgments

Funding for this research was provided by the University of Florida and an award from the Estuarine Reserves Division, Office of Ocean and Coastal Resource Management, National Ocean Service, National Oceanic and Atmospheric Administration. Invaluable field and lab assistance was generously provided by Don O’Steen, Loren Mathews, Lance Riley, Paula Viveros, Joey Chait, and Dorota Roth. The authors would also like to thank Blake Schaeffer, Daryl Parkyn, Clay Montague, Rick Gleeson, Shirley Baker, and one anonymous reviewer for their feedback on the manuscript.

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Dix, N., Phlips, E. & Suscy, P. Factors Controlling Phytoplankton Biomass in a Subtropical Coastal Lagoon: Relative Scales of Influence. Estuaries and Coasts 36, 981–996 (2013). https://doi.org/10.1007/s12237-013-9613-4

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