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Crystal-modeler: A tool for geometric analysis and three-dimensional modeling of crystal forms based on rectangular coordinates in space

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Abstract

Various classification approaches have been developed for geometric form of crystals. One method involves the generation of three-dimensional (3D) models of crystals, mainly through graphical representations. However, traditional graphical representations mainly depend on symmetrical operations of crystal planes and the application of polar stereographic projections. There is still very few geometric analysis or mathematical expression for the rectangular coordinate system, implying the limited 3D visualization of crystal forms. In this paper, we present a newly geometric analysis that allows 3D visualization analysis of crystal forms and further identifies geometric relations between crystal forms. In detail, crystal models are divided in a 3D rectangular coordinate system within 47 types of geometric form into the tetrahedron, polygon (polyhedron), and cube classes. What’s more, we determine the vertex space coordinates of the 47 types of crystal form through geometric analysis and coordinate calculation of the crystal forms. Last but not least, in order to obtain 3D models of every geometric form under the automorphism of crystals, it is the convex envelope geometric polyhedron algorithm created to calculate the edges and triangular faces by WebGL technology, which makes it possible to accomplish an online interactive 3D crystallographic study system in a web-browser.

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The date that supports the findings of this study are available in the supplementary material of this article.

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Funding

This article is supported by Research on rapid evaluation method and technology of associated mineral resources based on data sharing and management of oil and gas exploration and development (kt2021-06–15), National Natural Science Foundation of China (No.42271014), and High level talent scientific research start-up fund project of Beibu Gulf University (19KYQD30).

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Authors and Affiliations

Authors

Contributions

Conceptualization, H. C. and W. Y.; Data curation, H. C.; Formal analysis, H. C.; Funding acquisition, H. C. and R.W.; Investigation, H. C., W. Y. and R.W.; Methodology, H. C., W. Y. and R.W.; Project administration, H. C.; Resources, H. C. and W. Y.; Software, H. C. and W. Y.; Supervision, H. C.; Validation, H. C.; Visualization, H. C. and W. Y.; Writing – original draft, H. C.; Writing – review & editing, H. C., R.W. and Y. Li.

Corresponding author

Correspondence to Ran Wang.

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The authors declare no competing interests.

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Communicated by H. Babaie

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Supplementary file1 (ZIP 762 KB)

Appendix

Appendix

Table 2.

Table 2 The coordinates of each vertex of the 47 kinds of geometric form

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Chao, H., Li, Y., Yao, W. et al. Crystal-modeler: A tool for geometric analysis and three-dimensional modeling of crystal forms based on rectangular coordinates in space. Earth Sci Inform 16, 675–693 (2023). https://doi.org/10.1007/s12145-022-00905-5

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