Abstract
Medulloblastoma (MB) is a malignant tumor of the cerebellum that occurs in children and infants. Abnormal neuronal differentiation can lead to brain tumors, and topoisomerase IIβ (Top IIβ) plays an important role in neuronal differentiation. The aim of this study was to investigate the molecular mechanism of 13-cis retinoic acid (13-cis RA) promoting the expression of Top IIβ and inducing neuronal differentiation in human MB Daoy cells. The results showed that 13-cis RA inhibited the cell proliferation and induced cell cycle arrest in G0/G1 phase. The cells differentiated into a neuronal phenotype, with high expression of the neuronal marker microtubule-associated protein 2 (MAP2) and abundant Top IIβ, and obvious neurite growth. Chromatin immunoprecipitation (ChIP) assay showed that histone H3 lysine 27 tri-methylation (H3K27me3) modification in Top IIβ promoter decreased after 13-cis RA-induced cell differentiation, while jumonji domain-containing protein 3 (JMJD3) binding in Top IIβ promoter increased. These results suggest that H3K27me3 and JMJD3 can regulate the expression of Top IIβ gene, which is related to inducing neural differentiation. Our results provide new insights into understanding the regulatory mechanisms of Top IIβ during neuronal differentiation and imply the potential application of 13-cis RA in the clinical treatment of MB.
Similar content being viewed by others
Data Availability
All data generated or analysed during this study are included in this published article and its supplementary information files.
Abbreviations
- 13-cis RA:
-
13-Cis retinoic acid
- Top IIβ:
-
Topoisomerase IIβ
- MAP2:
-
Microtubule-associated protein 2
- ChIP:
-
Chromatin immunoprecipitation
- H3K27me3:
-
Histone H3 lysine 27 tri-methylation
- JMJD3:
-
Jumonji domain-containing protein 3
- MB:
-
Medulloblastoma
- CNS:
-
Central nervous system
- DMB:
-
Desmoplastic medulloblastoma
References
Khatua, S., Song, A., Citla Sridhar, D., & Mack, S. C. (2018). Childhood medulloblastoma: Current therapies, emerging molecular landscape and newer therapeutic insights. Current Neuropharmacology, 16, 1045–1058. https://doi.org/10.2174/1570159X15666171129111324
Beccaria, K., Padovani, L., Bouchoucha, Y., & Doz, F. (2021). Current treatments of medulloblastoma. Current Opinion in Oncology, 33, 615–620. https://doi.org/10.1097/CCO.0000000000000788
Menyhart, O., & Gyorffy, B. (2020). Molecular stratifications, biomarker candidates and new therapeutic options in current medulloblastoma treatment approaches. Cancer and Metastasis Reviews, 39, 211–233. https://doi.org/10.1007/s10555-020-09854-1
Yi, J., Shi, X., Xuan, Z., & Wu, J. (2021). Histone demethylase UTX/KDM6A enhances tumor immune cell recruitment, promotes differentiation and suppresses medulloblastoma. Cancer Letters, 499, 188–200. https://doi.org/10.1016/j.canlet.2020.11.031
Madabhushi, R. (2018). The roles of DNA topoisomerase IIbeta in transcription. Internationl Journal of Molecular Sciences 19, 1917. https://doi.org/10.3390/ijms19071917
Thakurela, S., Garding, A., Jung, J., Schubeler, D., Burger, L., & Tiwari, V. K. (2013). Gene regulation and priming by topoisomerase IIalpha in embryonic stem cells. Nature Communications, 4, 2478. https://doi.org/10.1038/ncomms3478
Zaim, M., & Isik, S. (2018). DNA topoisomerase IIbeta stimulates neurite outgrowth in neural differentiated human mesenchymal stem cells through regulation of Rho-GTPases (RhoA/Rock2 pathway) and Nurr1 expression. Stem Cell Research & Therapy, 9, 114. https://doi.org/10.1186/s13287-018-0859-4
Yan, Y., Zhao, J., Cao, C., Jia, Z., Zhou, N., Han, S., Wang, Y., Xu, Y., Zhao, J., Yan, Y., & Cui, H. (2014). Tetramethylpyrazine promotes SH-SY5Y cell differentiation into neurons through epigenetic regulation of Topoisomerase IIbeta. Neuroscience, 278, 179–193. https://doi.org/10.1016/j.neuroscience.2014.08.010
Wang, Y., Zhao, J., Cao, C., Yan, Y., Chen, J., Feng, F., Zhou, N., Han, S., Xu, Y., Zhao, J., Yan, Y., & Cui, H. (2018). The role of E2F1-topoIIbeta signaling in regulation of cell cycle exit and neuronal differentiation of human SH-SY5Y cells. Differentiation, 104, 1–12. https://doi.org/10.1016/j.diff.2018.07.002
Miyahara, H., Natsumeda, M., Kanemura, Y., Yamasaki, K., Riku, Y., Akagi, A., Oohashi, W., Shofuda, T., Yoshioka, E., Sato, Y., Taga, T., Naruke, Y., Ando, R., Hasegawa, D., Yoshida, M., Sakaida, T., Okada, N., Watanabe, H., Ozeki, M., … Iwasaki, Y. (2021). Topoisomerase IIbeta immunoreactivity (IR) co-localizes with neuronal marker-IR but not glial fibrillary acidic protein-IR in GLI3-positive medulloblastomas: An immunohistochemical analysis of 124 medulloblastomas from the Japan Children’s Cancer Group. Brain Tumor Pathology, 38, 109–121. https://doi.org/10.1007/s10014-021-00396-0
Chen, J., Zhao, J., Zhou, X., Liu, S., Yan, Y., Wang, Y., Cao, C., Han, S., Zhou, N., Xu, Y., Zhao, J., Yan, Y., & Cui, H. (2017). Immunohistochemical investigation of topoIIbeta, H3K27me3 and JMJD3 expressions in medulloblastoma. Pathology, Research and Practice, 213, 975–981. https://doi.org/10.1016/j.prp.2017.04.012
Huang, M. E., Ye, Y. C., Chen, S. R., Chai, J. R., & Wang, Z. Y. (1989). Use of all-trans retinoic acid in the treatment of acute promyelocytic leukemia. Haematology and Blood Transfusion, 32, 88–96. https://doi.org/10.1007/978-3-642-74621-5_14
Bremner, J. D., Shearer, K. D., & McCaffery, P. J. (2012). Retinoic acid and affective disorders: The evidence for an association. Journal of Clinical Psychiatry, 73, 37–50. https://doi.org/10.4088/JCP.10r05993
Tosun, M., Soysal, Y., Mas, N. G., & Karabekir, H. S. (2015). Comparison of the effects of 13-cis retinoic acid and melatonin on the viabilities of SH-SY5Y neuroblastoma cell line. Journal of Korean Neurosurgical Association, 57, 147–151. https://doi.org/10.3340/jkns.2015.57.3.147
Brodeur, G. M. (2003). Neuroblastoma: Biological insights into a clinical enigma. Nature Reviews Cancer, 3, 203–216. https://doi.org/10.1038/nrc1014
Sato, Y., Kurosawa, H., Sakamoto, S., Kuwashima, S., Hashimoto, T., Okamoto, K., Tsuchioka, T., Fukushima, K., & Arisaka, O. (2015). Usefulness of 18F-fluorodeoxyglucose positron emission tomography for follow-up of 13-cis-retinoic acid treatment for residual neuroblastoma after myeloablative chemotherapy. Medicine (Baltimore), 94, e1290. https://doi.org/10.1097/MD.0000000000001290
Yan, Y. X., Zhao, J. X., Han, S., Zhou, N. J., Jia, Z. Q., Yao, S. J., Cao, C. L., Wang, Y. L., Xu, Y. N., Zhao, J., Yan, Y. L., & Cui, H. X. (2015). Tetramethylpyrazine induces SH-SY5Y cell differentiation toward the neuronal phenotype through activation of the PI3K/Akt/Sp1/TopoIIbeta pathway. European Journal of Cell Biology, 94, 626–641. https://doi.org/10.1016/j.ejcb.2015.09.001
Ferrari-Toninelli, G., Bonini, S. A., Uberti, D., Buizza, L., Bettinsoli, P., Poliani, P. L., Facchetti, F., & Memo, M. (2010). Targeting Notch pathway induces growth inhibition and differentiation of neuroblastoma cells. Neuro-Oncology, 12, 1231–1243. https://doi.org/10.1093/neuonc/noq101
Rossi, A., Russo, G., Puca, A., La Montagna, R., Caputo, M., Mattioli, E., Lopez, M., Giordano, A., & Pentimalli, F. (2009). The antiretroviral nucleoside analogue Abacavir reduces cell growth and promotes differentiation of human medulloblastoma cells. International Journal of Cancer, 125, 235–243. https://doi.org/10.1002/ijc.24331
Chlapek, P., Neradil, J., Redova, M., Zitterbart, K., Sterba, J., & Veselska, R. (2014). The ATRA-induced differentiation of medulloblastoma cells is enhanced with LOX/COX inhibitors: An analysis of gene expression. Cancer Cell International, 14, 51. https://doi.org/10.1186/1475-2867-14-51
Patties, I., Kortmann, R. D., Menzel, F., & Glasow, A. (2016). Enhanced inhibition of clonogenic survival of human medulloblastoma cells by multimodal treatment with ionizing irradiation, epigenetic modifiers, and differentiation-inducing drugs. Journal of Experimental & Clinical Cancer Research, 35, 94. https://doi.org/10.1186/s13046-016-0376-1
Nomura, M., Shimbo, T., Miyamoto, Y., Fukuzawa, M., & Kaneda, Y. (2013). 13-Cis retinoic acid can enhance the antitumor activity of non-replicating Sendai virus particle against neuroblastoma. Cancer Science, 104, 238–244. https://doi.org/10.1111/cas.12063
Chuang, H. C., Lin, H. Y., Liao, P. L., Huang, C. C., Lin, L. L., Hsu, W. M., & Chuang, J. H. (2020). Immunomodulator polyinosinic-polycytidylic acid enhances the inhibitory effect of 13-cis-retinoic acid on neuroblastoma through a TLR3-related immunogenic-apoptotic response. Laboratory Investigation, 100, 606–618. https://doi.org/10.1038/s41374-019-0356-0
Evan, G. I., & Vousden, K. H. (2001). Proliferation, cell cycle and apoptosis in cancer. Nature, 411, 342–348. https://doi.org/10.1038/35077213
Jauhari, A., Singh, T., Singh, P., Parmar, D., & Yadav, S. (2018). Regulation of miR-34 family in neuronal development. Molecular Neurobiology, 55, 936–945. https://doi.org/10.1007/s12035-016-0359-4
Marzinke, M. A., & Clagett-Dame, M. (2012). The all-trans retinoic acid (atRA)-regulated gene Calmin (Clmn) regulates cell cycle exit and neurite outgrowth in murine neuroblastoma (Neuro2a) cells. Experimental Cell Research, 318, 85–93. https://doi.org/10.1016/j.yexcr.2011.10.002
Ognibene, M., & Pezzolo, A. (2020). Ezrin interacts with the tumor suppressor CHL1 and promotes neuronal differentiation of human neuroblastoma. PLoS One, 15, e0244069. https://doi.org/10.1371/journal.pone.0244069
Bollimpelli, V. S., Dholaniya, P. S., & Kondapi, A. K. (2017). Topoisomerase IIbeta and its role in different biological contexts. Archives of Biochemistry and Biophysics, 633, 78–84. https://doi.org/10.1016/j.abb.2017.06.021
Yeman, K. B., & Isik, S. (2021). Down regulation of DNA topoisomerase IIbeta exerts neurodegeneration like effect through Rho GTPases in cellular model of Parkinson’s disease by down regulating tyrosine hydroxylase. Neurological Research, 43, 464–473. https://doi.org/10.1080/01616412.2020.1867949
Sun, J., Yang, J., Miao, X., Loh, H. H., Pei, D., & Zheng, H. (2021). Proteins in DNA methylation and their role in neural stem cell proliferation and differentiation. Cell Regeneration, 10, 7. https://doi.org/10.1186/s13619-020-00070-4
Dixit, D., Prager, B. C., Gimple, R. C., Poh, H. X., Wang, Y., Wu, Q., Qiu, Z., Kidwell, R. L., Kim, L. J. Y., Xie, Q., Vitting-Seerup, K., Bhargava, S., Dong, Z., Jiang, L., Zhu, Z., Hamerlik, P., Jaffrey, S. R., Zhao, J. C., Wang, X., & Rich, J. N. (2021). The RNA m6A reader YTHDF2 maintains oncogene expression and is a targetable dependency in glioblastoma stem cells. Cancer Discovery, 11, 480–499. https://doi.org/10.1158/2159-8290.CD-20-0331
Ziffra, R. S., Kim, C. N., Ross, J. M., Wilfert, A., Turner, T. N., Haeussler, M., Casella, A. M., Przytycki, P. F., Keough, K. C., Shin, D., Bogdanoff, D., Kreimer, A., Pollard, K. S., Ament, S. A., Eichler, E. E., Ahituv, N., & Nowakowski, T. J. (2021). Single-cell epigenomics reveals mechanisms of human cortical development. Nature, 598, 205–213. https://doi.org/10.1038/s41586-021-03209-8
Strejczek, A., Woszczyk, D., Urbaniak, H., Rozanska, M., Robakm, M., Matuszewska, Z., Barciszewska, A. M. (2021). Epigenetic-based therapy-A prospective chance for medulloblastoma patients’ recovery. International Journal of Molecular Sciences, 22, 4925. https://doi.org/10.3390/ijms22094925
Badodi, S., Pomella, N., Zhang, X., Rosser, G., Whittingham, J., Niklison-Chirou, M. V., Lim, Y. M., Brandner, S., Morrison, G., Pollard, S. M., Bennett, C. D., Clifford, S. C., Peet, A., Basson, M. A., & Marino, S. (2021). Inositol treatment inhibits medulloblastoma through suppression of epigenetic-driven metabolic adaptation. Nature Communications, 12, 2148. https://doi.org/10.1038/s41467-021-22379-7
Shiraishi, R., & Kawauchi, D. (2021). Epigenetic regulation in medulloblastoma pathogenesis revealed by genetically engineered mouse models. Cancer Science, 112, 2948–2957. https://doi.org/10.1111/cas.14990
Mohn, F., Weber, M., Rebhan, M., Roloff, T. C., Richter, J., Stadler, M. B., Bibel, M., & Schubeler, D. (2008). Lineage-specific polycomb targets and de novo DNA methylation define restriction and potential of neuronal progenitors. Molecular Cell, 30, 755–766. https://doi.org/10.1016/j.molcel.2008.05.007
Testa, G. (2011). The time of timing: How Polycomb proteins regulate neurogenesis. BioEssays, 33, 519–528. https://doi.org/10.1002/bies.201100021
Akizu, N., Estaras, C., Guerrero, L., Marti, E., & Martinez-Balbas, M. A. (2010). H3K27me3 regulates BMP activity in developing spinal cord. Development, 137, 2915–2925. https://doi.org/10.1242/dev.049395
Burgold, T., Spreafico, F., Santa, F. D., Totaro, M. G., Prosperini, E., Natoli, G., & Testa, G. (2008). The histone H3 lysine 27-specific demethylase Jmjd3 is required for neural commitment. PLOS ONE. https://doi.org/10.1371/journal.pone.0003034
Shi, X. M., Zhang, Z. L., Zhan, X. M., Cao, M., Satoh, T., Akira, S., Shpargel, K., Magnuson, T., Li, Q. T., Wang, R. F., Wang, C. C., Ge, K., Wu, J. (2014). An epigenetic switch induced by Shh signalling regulates gene activation during development and medulloblastoma growth. Nature Communications, 5, 5425. https://doi.org/10.1038/ncomms6425
Tran, N., Broun, A., Ge, K. (2020). Lysine demethylase KDM6A in differentiation, development, and cancer. Molecular and Cellular Biology, 40, e00341-20. https://doi.org/10.1128/MCB.00341-20
Funding
The work was supported by the University Science and Technology Research Project of Hebei Province (QN2017107).
Author information
Authors and Affiliations
Contributions
Jing Chen: conceptualization, methodology, writing—original draft, formal analysis. Jing-Xia Zhang: methodology, formal analysis, validation. Hai-Xia Lei: methodology, validation. Xing-Yu Li: data curation, formal analysis. Yong-Xin Yan: formal analysis, validation. Yan-Ling Wang: methodology, data curation. Yu-Hong Lv: funding acquisition, resources. Yun-Li Yan: project administration. Yu-Hua Lei: writing—reviewing and editing, supervision, project administration.
Corresponding author
Ethics declarations
Ethics Approval
Not applicable
Consent to Participate
All authors have their consent to participate.
Consent for Publication
All authors have their consent to publish their work.
Conflict of Interest
The authors declare no competing interests.
Additional information
Publisher's Note
Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Supplementary Information
Below is the link to the electronic supplementary material.
Rights and permissions
Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.
About this article
Cite this article
Chen, J., Zhang, JX., Lei, HX. et al. 13-Cis Retinoic Acid Induces Neuronal Differentiation in Daoy (Medulloblastoma) Cells Through Epigenetic Regulation of Topoisomerase IIβ. Appl Biochem Biotechnol 195, 7429–7445 (2023). https://doi.org/10.1007/s12010-023-04476-z
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s12010-023-04476-z