Skip to main content
Log in

Local inhomogeneity in totally asymmetric simple exclusion processes with different hopping rates

  • Published:
Journal of Central South University Aims and scope Submit manuscript

Abstract

Local inhomogeneity in totally asymmetric simple exclusion processes (TASEPs) with different hopping rates was studied. Many biological and chemical phenomena can be described by these non-equilibrium processes. A simple approximate theory and extensive Monte Carlo computer simulations were used to calculate the steady-state phase diagrams and bulk densities. It is found that the phase diagram for local inhomogeneity in TASEP with different hopping rates p is qualitatively similar to homogeneous models. Interestingly, there is a saturation point pair (α*, β*) for the system, which is decided by parameters p and q. There are three stationary phases in the system, when parameter p is fixed (i.e., p=0.8), with the increase of the parameter q, the region of LD/LD and HD/HD phase increases and the HD/LD is the only phase which the region shrinks. The analytical results are in good agreement with simulations.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. XIAO Song, CAI Jiu-Ju, LIU Fei. Zone inhomogeneity with the random asymmetric simple exclusion process in a one-lane system [J]. Chinese Physics B, 2009, 18(11): 4613–4621.

    Article  Google Scholar 

  2. XIAO Song, CAI Jiu-ju, WANG Rui-li, LIU Ming-zhe, LIU Fei. Theoretical investigation of synchronous totally asymmetric simple exclusion process on lattices with two consecutive junctions in multiple-input-multiple-output traffic system [J]. Chinese Physics B, 2009, 18(12): 5103–5110.

    Article  Google Scholar 

  3. CHOWDHURY D, SCHADSCHNEIDER A, NISHINARI K. Physics of transport and traffic in biology: From molecular motors and cells to organisms [J]. Phys Life Rev, 2005, 2: 318–352.

    Article  Google Scholar 

  4. LIPOWSKY R, CHAI Y, KLUMPP S, LIEPELT S, MÜLLER M J I. Molecular motor traffic: From biological nanomachines to macroscopic transport [J]. Physica A, 2006, 372: 34–51.

    Article  Google Scholar 

  5. STACHOWIAK M R, O’sHAUGHNESSY B. Kinetics of stress fibers [J]. New J Phys, 2008, 10: 025002.

    Article  Google Scholar 

  6. PETER R, SCHALLER V, ZIEBERT F, ZIMMERMANN W. Instabilities in a two-dimensional polar filament-motor system [J]. New J Phys, 2008, 10: 035002.

    Article  Google Scholar 

  7. GREULICH P, SCHADSCHNEIDER A. Single-bottleneck approximation for driven lattice gases with disorder and open boundary conditions [J]. J Stat Mech, 2008, 4: P04009.

    Article  Google Scholar 

  8. SHAW L B, KOLOMEISKY A B, LEE K H. Local inhomogeneity in asymmetric simple exclusion processes with extended objects [J]. J Phys A, 2004, 37: 2105–2113.

    Article  MathSciNet  MATH  Google Scholar 

  9. CHOU T, LAKATOS G. Clustered bottlenecks in mRNA translation and protein synthesis [J]. Phys Rev Lett, 2004, 93(13): 198101.

    Article  Google Scholar 

  10. KLUMPP S, LIPOWSKY R. Asymmetric simple exclusion processes with diffusive bottlenecks [J]. Phys Rev E, 2004, 70(6): 066104–066113.

    Article  Google Scholar 

  11. PIEROBON P, MOBILIA M, KOUYOS R, EREY E. Bottleneck-induced transitions in a minimal model for intracellular transport [J]. Phys Rev E, 2006, 74(3): 031906–031919.

    Article  Google Scholar 

  12. FOULAADVAND M E, CHAABOKI S, SAALEHI M. Characteristics of ASEP in the presence of quenched spatial disorder [J]. Phys Rev E, 2007, 75(1): 011127–011136.

    Article  Google Scholar 

  13. DONG J J, SCHMITTMANN B, ZIA R K P. Inhomogeneous exclusion processes with extended objects: The effect of defect locations [J]. Phys Rev E, 2007, 76(5): 051113–051126.

    Article  Google Scholar 

  14. WANG R, LIU M, JIANG R. Local inhomogeneity in two-lane asymmetric simple exclusion processes coupled with Langmuir kinetics [J]. Physica A, 2008, 387: 457–466.

    Article  Google Scholar 

  15. LIU M, WANG R, JIANG R, HU M B, GAO. Defect-induced transitions in synchronous asymmetric exclusion processes [J]. Phys Lett A, 2009, 373: 195–200.

    Article  MATH  Google Scholar 

  16. LIU Ming-zhe, WANG Rui-li, HU Mao-bin, JIANG Rui, GAO Yang. Synchronous asymmetric exclusion processes with an extended defect [J]. Physics Letters A, 2010, 374: 1407–1413.

    Article  MATH  Google Scholar 

  17. XIAO Song, CAI Jiu-Ju, LIU Fei. GENERAL: Zone inhomogeneity with the random asymmetric simple exclusion process in a one-lane system [J]. Chinese Physics B, 2009, 18(11): 4613–4621.

    Article  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Shu-ying Wu  (吴淑英).

Additional information

Foundation item: Project(2011FZ050) supported by Applied Basic Research Program of Yunnan Provincial Science and Technology Department, China; Project(2011J084) supported by Master Program of Yunnan Province Education Department, China

Rights and permissions

Reprints and permissions

About this article

Cite this article

Xiao, S., Wu, Sy., Zheng, Ds. et al. Local inhomogeneity in totally asymmetric simple exclusion processes with different hopping rates. J. Cent. South Univ. 19, 3012–3016 (2012). https://doi.org/10.1007/s11771-012-1371-0

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s11771-012-1371-0

Key words

Navigation