Abstract
Purpose
A combination approach of urea-amended aqueous base and H2SO4-amended dimethyl sulfoxide (DMSO) was recently developed in our laboratories to extract the most refractory soil humin fractions. With this approach, up to 95% of the humified soil organic matter (SOM) could be isolated. However, it is still not fully known whether the uses of these amended solvent systems will alter the compositions or structures of the humic fractions isolated.
Method
Commercially available lignin and cellulose products were selected as humic-related model compounds with possible contributions to the compositions of soil humin. These were subjected to extraction sequences with solvents (6 M urea + 0.1 M NaOH and DMSO + sulphuric acid (94:6, v/v), respectively) used in our studies for the isolation and characterisation of soil humin. Spectroscopic comparisons (FTIR and 13C NMR) were carried out to investigate their compositional differences before and after treatment with the solvents. Furthermore, soil humic acids extracted in a basic solution and a humic acid-like fraction extracted in urea-amended aqueous base were compared for their similarities and compositional differences. Also, a soil humin, isolated in DMSO + H2SO4, was compared with a humin material isolated following the destruction of the clay to which it was sorbed.
Results
The inclusion of urea in the base system gives rise to the isolation of humic components that would be ‘contaminants’ in the soil humin materials. Its inclusion in the basic solvent will result of interactions with carbonyl functionalities in the organic substrates giving a slight increase in the N contents of the fractions isolated. Otherwise, the spectroscopic evidence indicates that the composition of the urea-amended isolate is the same as that of the equivalent base solution extract at pH 12–13. The compositions of the cellulose and lignin materials used were not altered by the base/urea solvent. The DMSO + H2SO4 solvent enabled a ‘true’ soil humin to be isolated and did not alter the compositions of the cellulose and lignin materials used.
Conclusion
Exhaustive urea-amended base extractions of soil allow the isolation of humic and fulvic acids-free, unaltered soil humin when H2SO4-amended DMSO solvent is applied in sequence. These solvents do not give significant alterations to the compositions of the lignin and ‘crystalline’ cellulose, insoluble biomass components with significant contribution to the soil humin fraction obtained by ordinary methods (e.g., HF/HCl demineralisation). The same can be considered to apply for the cuticular materials, which have higher resistances to transformations.
Similar content being viewed by others
References
Brayton CF (1986) Dimethyl sulfoxide (DMSO): a review. Cornell Vet 76(1):61–90
Chang RR, Mylotte R, Hayes MHB, Mclnerney R, Tzou YM (2014) A comparison of the compositional differences between humic fractions isolated by the IHSS and exhaustive extraction procedures. Sci Nat 101(3):197–209
Clapp CE, Hayes MHB, Simpson AJ and Kingery WL (2005) Chemistry of soil organic matter. In: Tabatabai MA and Slarks DL (eds) Chemical processes in soils, Soil Sci Soc Ame, Madison, WI, pp. 1–150
DiDonato N, Chen H, Waggoner D, Hatcher PG (2016) Potential origin and formation for molecular components of humic acids in soils. Geochem Cosmochim Acta 178:210–222
Fagbenro JM, Hayes MHB, Law IA, Agboola A (1985) Extraction of soil organic matter and humic substances from two Nigerian soils using three solvent mixtures. In: Hayes MHB, Swift RS (eds) the 2nd Interntional Conference of IHSS. University of Birmingham, Birmingham, UK, pp 22–26
Hatcher PG (1987) Chemical structural studies of natural lignin by dipolar dephasing solid-state 13C nuclear magnetic resonance. Org Geochem 11(1):31–39
Hayes MHB (1985) Extraction of humic substances from soil. In: Aiken GR, McKnight DM, Wershaw RL and MacCarthy P (eds) Humic substances in soil, sediment, and water: geochemistry, isolation, and characterization, John Wiley & Sons, New York, pp. 329–362
Hayes MHB (2006) Solvent systems for the isolation of organic components from soils. Soil Sci Soc Am 70(3):986–994
Hayes MHB, Mylotte R, Swift RS (2017) Chapter two - humin: its composition and importance in soil organic matter. In: Sparks DL (ed) Adv Agron. Academic Press, pp 47–138
Hayes MHB and Swift RS (1978) The chemistry of soil organic colloids. In: Greenland DJ and Hayes MHB (eds) The chemistry of soil constituents, John Wiley and Sons, Chichester, UK
Hayes MHB, Swift RS (2020) Chapter one - vindication of humic substances as a key component of organic matter in soil and water. In: Sparks DL (ed) Adv Agron. Academic Press, pp 1–40
Hayes MHB, Swift RS, Wardle RE, Brown JK (1975) Humic materials from an organic soil: a comparison of extractants and of properties of extracts. Geoderma 13(3):231–245
Hayes TM, Hayes MHB, Skjemstad JO, Swift RS (2008) Compositional relationships between organic matter in a grassland soil and its drainage waters. Europ J Soil Sci 59(4):603–634
Hayes TM, Hayes MHB, Swift RS (2012) Detailed investigation of organic matter components in extracts and drainage waters from a soil under long term cultivation. Org Geochem 52:13–22
Jackson M, Mantsch HH (1991) Beware of proteins in DMSO. BBA - Protein Proteomics 1078(2):231–235
Koshijima T, Watanabe T (2003) Association between lignin and carbohydrates in wood and other plant tissues (hardcover). Springer
Lorenz K, Lal R, Preston C, Nierop K (2007) Strengthening the soil organic carbon pool by increasing contributions from recalcitrant aliphatic bio(macro)molecules. Geoderma 142:1–10
Mao J, Cao X, Olk DC, Chu W, Schmidt-Rohr K (2017) Advanced solid-state NMR spectroscopy of natural organic matter. Prog Nuc Magn Reson Spectrosc 100:17–51
Mao JD, Schmidt-Rohr K (2004) Separation of aromatic-carbon C-13 NMR signals from di-oxygenated alkyl bands by a chemical-shift-anisotropy filter. Solid State Nucl Magn Reson 26(1):36–45
Martin D, Hauthal HG (1975) Dimethyl sulphoxide. Van Nostrand-Reinhold, New York
Mylotte R, Verheyen V, Reynolds A, Dalton C, Patti AF, Chang RR, Burdon J, Hayes MHB (2015) Isolation and characterisation of recalcitrant organic components from an estuarine sediment core. J Soils Sediments 15(1):211–224
Novotny EH, Hayes MHB, deAevedo ER, Bonagamba TJ (2006) Characterisation of black carbon-rich samples by 13C solid-state nuclear magnetic resonance. Sci Nat 93:447–450
Olk DC, Bloom PR, De Nobili M, Chen Y, McKnight DM, Wells MJM, Weber J (2019) Using humic fractions to understand natural organic matter processes in soil and water: selected studies and applications. J Environ Qual 48(6):1633–1643
Piccolo A, Mirabella A (1987) Molecular weight distribution of peat humic substances extracted with different inorganic and organic solutions. Sci Total Environ 62:39–46
Piccolo A, Rausa R, Calemma V (1989) FT-IR spectra of humic substances extracted with dipolar aprotic solvents. Chemosphere 18(9–10):1927–1933
Schmidt MWI, Knicker H, Hatcher PG, Kögel-Knabner I (1997) Improvement of C-13 and N-15 CPMAS NMR spectra of bulk soils, particle size fractions and organic material by treatment with 10% hydrofluoric acid. Europ J Soil Sci 48(2):319–328
Singh R, Singh S, Trimukhe KD, Pandare KV, Bastawade KB, Gokhale DV, Varma AJ (2005) Lignin-carbohydrate complexes from sugarcane bagasse: preparation, purification, and characterization. Carbohydr Polym 62(1):57–66
Song G, Hayes MHB, Novotny EH (2021) A two-year incubation study of transformations of crop residues into soil organic matter (SOM) and a procedure for the sequential isolation and the fractionation of components of SOM. Sci Total Environ 763:143034
Song G, Hayes MHB, Novotny EH, Simpson AJ (2011) Isolation and fractionation of soil humin using alkaline urea and dimethylsulphoxide plus sulphuric acid. Sci Nat 98(1):7–13
Song G, Novotny EH, Mao J-D, Hayes MHB (2017) Characterization of transformations of maize residues into soil organic matter. Sci Total Environ 579:1843–1854
Song G, Novotny EH, Simpson AJ, Clapp CE, Hayes MHB (2008) Sequential exhaustive extraction of a Mollisol soil, and characterizations of humic components, including humin, by solid and solution state NMR. Europ J Soil Sci 59(3):505–516
Spaccini R, Piccolo A, Haberhauer G, Gerzabek MH (2000) Transformation of organic matter from maize residues into labile and humic fractions of three European soils as revealed by 13C distribution and CPMAS-NMR spectra. Eur J Soil Sci 51(4):583–594
Tamai M, Inoko A (1971) On the utilization of dimethylsulfoxide as a solvent for soil organic matter. Miyazaki Daigaku Nogakubu Kenkyu Hokoku 18:179–188
Yasuda S, Fukushima K, Kakehi A (2001) Formation and chemical structures of acid-soluble lignin I: sulfuric acid treatment time and acid-soluble lignin content of hardwood. J Wood Sci 47(1):69–72
Funding
This work was supported by the Science Foundation Ireland (SFI), Grant Number WRMDS1-SI2008 and GEOF833; the Environmental Protection Agency (EPA) Ireland, Grant Number G2001S/CD-(3/3); the Fundação de Amparo à Pesquisa do Estado do Rio de Janeiro, Brazil, Grant Number FAPERJ, E_26/202.874/2018; the National Council for Scientific and Technological Development, Brazil, Grant Number CNPq, 309.391/2020-2 and 430.176/2018; and the Natural Science Foundation of Shandong, PR China, Grant Number ZR202102240124.
Author information
Authors and Affiliations
Corresponding author
Ethics declarations
Conflict of interest
The authors declare no competing interests.
Additional information
Responsible editor: Anja Miltner
Publisher's Note
Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Rights and permissions
Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.
About this article
Cite this article
Song, G., Novotny, E.H. & Hayes, M.H.B. Vindication for uses of urea-amended aqueous alkali and of concentrated H2SO4-amended DMSO in an exhaustive extraction sequence for the isolation of humic and of humin components of SOM. J Soils Sediments 23, 1146–1155 (2023). https://doi.org/10.1007/s11368-022-03390-x
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s11368-022-03390-x