Experimental setup
General setup
The experiment was conducted in two 60-m2 adjacent greenhouse cabins at the Leibniz Institute of Vegetable and Ornamental Crops (IGZ) in Grossbeeren, Germany (52° 22′ N, 13° 18′ E, alt. 40 m). Both cabins consisted of eight parallel rows, 11 plants per row, and a plant density of 1.4 m−2. Each row consisted of an elevated trough 8 × 0.2 × 0.07 m (length × width × height) covered in plastic film, an insulated reservoir tank, a pump with recirculating hose, and wire support for the plants (see Appendix E . 11). The troughs were supplied continuously with nutrient solution at a flow rate of 2 L min−1 which was pumped from a supply tank.
The experiment began with the sowing of seeds on 28 February, healthy seedlings were then transplanted into the hydroponic nutrient film technique (NFT) system on 17 April, and treatments commenced 21 days later, on 8 May 2019. Treatments were applied for 64 days until the complete removal of plant biomass on 11 July.
Growth conditions
In total, 300 tomato seeds of a commercial cultivar, Pannovy (Solanum lycopersicum L.), were planted for germination in coarse silica sand and placed into a growth chamber for 21 days. Following germination, healthy seedlings were individually separated into pots of coarse silica sand and allowed to adapt to greenhouse conditions. All plants received an equal fertilization of a diluted mineral nutrient solution (NS) before removal from the substrate. Desired recipe of the unmodified NS in mmol L−1: 23 NO3−-N, 0.1 NH4+-N, 8.0 K, 1.0 P, 10 Ca, 4.5 Mg, 6.0 S, 0.025 Fe, 0.005 Mn, 0.007 Zn, 0.050 B, 0.075 Cu, 0.0005 Mo (De Kreij et al. 1997; see Appendix B Table 9 for full recipe description).
After first flower formation, 176 healthy and equally developed seedlings were transplanted into troughs of a greenhouse hydroponic system utilizing the NFT. Plants were given an adaptation period of 21 days with the mineral NS (De Kreij et al. 1997) in the NFT system before treatments commenced in order to avoid transplant shock. Following this step, plants were subjected to four different fertilization treatments. Each trough was supplied by a 150-L reservoir tank containing the fertilization treatment in the form of an aqueous NS with demineralized tap water, designed as a closed-loop system to be replaced weekly and adapted during the week. Treatments consisted of four replicates (n = 4) randomly assigned to troughs (1–16). All troughs received the allotted treatment for the remainder of the experiment (64 days).
Average temperature values for both greenhouse cabins were 21.8 °C, with a maximum of 31 °C and a minimum of 14 °C. The mean relative humidity was 66%, and the mean ambient CO2 concentration was 400 μmol mol−1. Natural lighting was the only source of UV radiation, daily photosynthetically active radiation (PAR) averaged 24.8 mol m−2 day−1, with a maximum of 36.7 mol m−2 day−1 and a minimum of 4.0 mol m−2 day−1 within the greenhouse cabins (see Appendix C Figs. 6 and 7).
To combat the onset of powdery mildew, a commercially available sulfur (S)-based fungicide—Kumulus® (BASF Agricultural Solutions, Limburgerhof, Germany)—was applied twice as a foliar spray according to product guidelines. Encarsia Formosa was used as a biological pest control of whitefly (family Aleyrodidae). Manual pollination was performed twice weekly with the use of an electric toothbrush, targeting the stamen of all old and newly developed flowers throughout all 16 replicates.
Nutrient solution treatments
Treatments
The four treatments with different RFs used were as follows: (1) CRO, using the NUF “Crop”; (2) AUR, using the NUF “Aurin”; (3) S+V, a mixture of the two established organo-mineral RF’s struvite and vinasse; and (4) NPK, a standardized synthetic mineral fertilizer as the control treatment (adaptation of the unmodified NS, as described above).
Fertilizers tested
The novel RF product, hereinafter referred to as “Crop,” was provided by the project Combined Regenerative Organic Food Production (C.R.O.P.) of the Institute of Aerospace Medicine (Deutsche Zentrum für Luft- und Raumfahrt e.V., DLR) in Cologne, Germany. The C.R.O.P. filter system is a fixed-bed biofiltration unit for urine degradation by nitrification with a buffered system using mussel shells (Bornemann et al. 2018; also see Appendix F for more information about C.R.O.P.). This biological process is realized in a microbial trickling filter (see Appendix F Fig. 13) which was operated with synthetic urine during initial phase of engineering and testing (see Appendix F, e.g., for composition of the synthetic urine used). “Crop” has a NH4+:NO3− ratio of 1:2 and a high Ca content due to the addition of mussel shells (Table 1).
Table 1 Average nutrient concentrations (mean ± standard error of n = 4 batches) found in the two urine-based recycling fertilizers “Crop” and “Aurin,” as well as in struvite and vinasse (as provided by the SF-Soepenberg GmbH). The novel RF product “Aurin” is produced in a process developed by the Swiss Federal Institute of Aquatic Science and Technology (Eawag). This system for urine processing comprises of a biological reactor for stabilization of human urine via nitrification with subsequent adsorption and distillation to purify and concentrate the RF product (Fumasoli et al. 2016; also see Appendix F, including Fig. 14, for more information about production process of “Aurin”). The “Aurin” used in this experiment is produced from source-separated human urine collected at Eawag’s main building. Due to distillation, the concentration of “Aurin” is about 10-fold higher than the “Crop” RF, resulting in a NH4+:NO3− ratio of 1:1 (Table 1).
The struvite used in the mixed RF treatment originated from an industrial waste water treatment plant in Germany that operates two “Phospaques” reactors to precipitate struvite (Abma et al. 2010). Struvite is a crystalline substance comprised of magnesium ammonium phosphate (MgNH4PO4·6H2O), and most often formed in aquatic systems high in NH4+-N and PO43−. Beside N and P, struvite also contained minor amounts of K, Na, and Zn (Table 1). Water-soluble PO43− of struvite was below 1%, whereas solubility was higher in citric acid (24%). Within the S+V treatment, struvite comprised N, P, and Mg as the main nutrient input, combined with vinasse as the major supply of K. Therefore, we used a solid “K-vinasse” product, which is characterized by a minor share of NH4+-N compared to most vinasse products available on the market, which are liquid fertilizers with high share of NH4+-N or amino acids to supply additional quickly available N. Both products, struvite and vinasse, were supplied by SF-Soepenberg GmbH (Hünxe, Germany).
Different batches of “Aurin” (n = 4) and “Crop” (n = 4) solutions were analyzed to provide an outline of the nutrient composition profiles (Table 1). The nutrient composition of struvite and vinasse of the production batch was provided by the manufacturer (SF-Soepenberg GmbH).
Nutrient solutions
To assure that optimal nutrient supply was achieved throughout all treatments in relation to the NS recipe used for the control treatment NPK, the RFs required additional supplementation of mineral nutrients. Alternative NS differed in mineral and nutrient constituents due to the variable composition, source, and processing of the different RFs. The two urine-based RFs were intended to deliver the majority of required N in the NS, and as a proof of concept, the S+V combined RF was utilized to assess efficacy with regards to K and P input. To indicate the potential substitution of mineral fertilizers with nutrients from RFs within the fresh nutrient solution, the following RR (Akram et al. 2018) was introduced.
RR (%) for nutrient i (N, K, P, Mg, S, Ca, or Na, in g L−1 or g kg−1) in treatment × (CRO, AUR, or S+V):
$$ {RR}_{i,x}=\frac{i_{Recycling\ fertilizer}}{i_{applied\ in\ total\ with\ treatment\ x}}\times 100 $$
(1)
The RR only accounts for substitution of a specific nutrient i by RFs in relation to the total amount of i supplied equaled to that in the NPK control treatment − the target concentration. It does not explain any nutrient uptake dynamics for the entirety of the experiment, only from commencement date of the different treatments. In order to achieve temporal stability with relation to mineral composition, pH, and EC of different treatments, the NS was replaced every week, starting from the date of treatment commencement. The weekly NS replacement also ensured a reduction in effects associated with salt accumulation and ionic imbalances of the NS. Although full nutrient use data are not available, the total substitution of i for the duration of the entire experiment was calculated based on the total nutrient uptake of the different treatments. In addition, the RR for nutrient i in total nutrient uptake in plant biomass of the RF treatments was related to the total nutrient uptake of the NPK control.
The EC and pH of the different NS were analyzed twice weekly and adapted to ideal ranges with EC and pH meters, respectively. Demineralized water was used to reduce EC when NS concentrations were above an EC of 3.0 dS m−1; nitric acid was used to decrease pH and sodium hydroxide to increase pH. The average pH of all treatments over the duration of the experiments was 5.4 ± 0.17, and EC 2.9 ± 0.03 dS m−1 (see Appendix B Fig. 5), which were in ideal ranges according to De Kreij et al. (1997).
Due to a high NH4+:NO3− ratio in “Aurin,” the AUR treatment received additional NO3− to balance the high share of NH4+ and reflect the target concentrations set by De Kreij et al. (1997). Hence, only 80% of total N in AUR was supplied from the RF resulting in an RRN of 80% (cf. Eq. 1). CRO required no additional supplementary mineral N due to the lower NH4+:NO3− ratio in “Crop.” S+V contained minimal overall N-content and therefore was supplemented with an additional 80% mineral N. S+V was supplemented with an additional 10% mineral K to match target values of unmodified NPK NS; no further supplementation for P and Mg was required (Table 2).
Table 2 Composition of the nutrient solution (NS) as applied to the four treatments described by the achieved macronutrient concentrations in mmol L−1 and opposed to the optimal ranges for tomato fertilization prior to fifth truss formation, adapted from De Kreij et al. (1997). In addition, the recycling rate (RR) is indicated in %, which is defined as—for example—S applied with “Crop” solution as % of the total S applied in the treatment (cf. Eq. 1) Due to a concern with the solubility of struvite and vinasse and the associated availability of P, K, and Mg, a nutrient solubility analysis was performed on the S+V solution to determine rates of plant available nutrients (see Appendix B Table 10). Analysis was performed on 100 ml aqueous solutions of different compositions mixed with demineralized water to better understand the interaction between the different compounds. The supernatant of the following solutions was analyzed: a struvite-only solution, a vinasse-only solution, a struvite and vinasse mixture solution, and the complete S+V NS taken from the reservoir tanks of the greenhouse. The lab solutions showed 100% solubility for K in the sole vinasse or mixed struvite and vinasse solution, but rather low P and Mg solubility, with maximum levels of 18% for Mg and 14.5% for P. In contrast to the lab solutions, the freshly mixed S+V NS taken from the trough container indicated a higher solubility for P (29%) and Mg (36%), but a lower solubility for K (65%). The lower pH of the container solution and constant movement by the pumping supposedly increased P and Mg solubility. Based on these container results, larger amounts of S+V were incorporated into the NS recipe than was initially deemed sufficient. Struvite was increased by a factor of 3 and vinasse by a factor of 2 to ensure a sufficient supply of soluble P, K, and Mg and to approximate the optimum range of the NPK control.
Following the formation of the fifth flowering truss, K input was increased by 3.5 mmol L−1, Ca decreased by 1.25 mmol L−1, and Mg decreased by 0.5 mmol L−1 for all treatments, to account for healthy fruit formation and development (De Kreij et al. 1997).
Harvesting and sampling
The first harvest began 45 days after treatment, and continued over the course of 19 days until termination of the experiment. The number of fruit and total fruit fresh matter (FM) per trough was recorded for all ripe, unripe and nonmarketable fruit. Marketable yield was defined as all mature fruit with ripe appearance (orange-red), and the absence of deformation (skin cracking, mechanical damage, or mutation) or blossom-end-rot (BER) (see Appendix E Fig. 12 for BER-affected fruit). Fruit size was not a factor in determining marketable yield. Total yield was defined as all fruit produced (ripe, unripe, and nonmarketable) up until final harvest. Total shoot biomass was defined as the aboveground biomass excluding fruiting organs, i.e., stem and leaf only. Fresh weight was recorded for all aboveground biomass (total shoot biomass and fruit yield) in each trough for all 11 plants.
Three neighboring sample plants per row were identified as representative mixed samples for dry matter (DM) determination and mineral composition analysis. The three sample plants were selected as follows: comparably representative growth/size/height and no damaged plants. Top, middle, and bottom sections of the three plants were used to create a mixed subsample for shoot biomass analysis. Similarly, eight fruit samples per row for each fruit category (ripe, unripe, and nonmarketable) were randomly selected from eight plants. Border plants were excluded from samples for all shoot and fruit analysis to avoid edge effects.
A mixed root sample for DM was obtained by removing a 150-cm length of root mass from the NFT system, corresponding to the three sample plants. Standardization was achieved by first measuring 20 cm into the up-flow direction from the stem of the first plant, and then 150 cm was measured into down-flow spanning the three sampling plants.
Determination of dry matter and mineral nutrient analysis
Shoot samples for nutrient analysis were oven-dried at 60 °C and fruits at 80 °C for up to 1 week, or when no further changes in weight were observed. Samples for DM determination and calculation of DM content were oven-dried at 105 °C (OECD 2005). Plant organ materials were milled to a fine powder using an electric centrifugal grinding mill with variable sieve sizes; leaves ground using a sieve of 0.25 mm and fruit ground to 0.5 mm.
Elemental analysis of C and N was performed according to Dumas combustion method on the Vario EL Cube (Elementar Analysensysteme GmbH, Langenselbold) (according to LUFA A2.2.5 1991). Plant DM and NS samples were prepared via an acid-digested heated-microwave pressure system on the MARS 5 Xpress (CEM GmbH, Kamp-Lintfort) and analyzed using inductively coupled plasma atomic emission spectroscopy (ICP-OES) with the iCAP 7400 (Thermo Fisher Scientific GmbH, Dreieich) for the nutrients P, K, S, Mg, Ca, Cl, Fe, Zn, B, Mn, Cu, and Na (according to LUFA 10.8.1.2 1976; LUFA 10.8.2 1976).
Analysis of sugar content
Ten red ripe fruits were selected as representative samples on the final day of harvesting—color stage 9–10 based on CBT color grading scale (CBT., Anonymous 1992)—and homogenized for sugar analysis. Fruit-soluble sugars (glucose and fructose) were determined enzymatically as demonstrated by Krumbein et al. (2004). Results were expressed in relation to 100 g FM (Schwarz et al. 2013).
Measurement of GHG emissions
Greenhouse gas emissions (N2O, CH4, and CO2) were measured using the closed-chamber method, as described by Rolston (1986) and Parkina and Venterea (2010) from the root zone of two selected neighboring plants. For this purpose, acrylic glass chambers fitting to the troughs holding the plants and NS were used. The gas-flux chambers had a size of 102 × 20 × 18 cm (length × width × height) and with an open bottom section. Chambers had two concentric openings on top to fit plant stems, in a distance of 50 cm from each other and with a diameter of 5 cm each. The chambers could be split in two halves in order to install them around the root zone and stems, and fastened by three hook closures (two on the short sides and one on top). Rubber gaskets on the bottom (foam rubber), between the two halves (silicone) and around the plant stems (foam rubber) were used to tighten the chambers. The NS-flow was made possible by the concave bottom of the chamber sides in NS-flow direction, whereby a small slit below the NS-water level remained open. Gas sampling was possible through a sampling port with a butyl septum on top of the chambers. Pressure balance was assured by a vent tube and temperature effects were minimized by sticking reflective aluminum foil all over the outer chamber surface (see Appendix E Figs. 9 and 10 for gas flux chamber photos).
The positioning of the chambers for gas flux measurements was based on suitability of gas chamber placement to mitigate damage to plants and maintain ideal measuring conditions and the exclusion of border plants. To ensure external influences, such as trough and gas chamber effects, the first baseline measurements were collected from all troughs 21 days after transplantation into the NFT system. Performed during the adaptation period, wherein, fertilization was homogenous throughout all treatments (NPK unmodified NS). Thereinafter, following the first NS exchange of the different fertilizer alternatives, seven gas samplings were performed throughout the duration of the experiment (12 weeks). Due to the measuring devices and labor restrictions, only three out of the four replications per treatment could be analyzed at each sampling day. The three analyzed replicates excluded the border rows 1, 8, and 16 to exclude potential edge effects, and row 10 showing deficiency symptoms at the beginning of the experiment (described below). Measuring days alternated between 1 day pre-NS exchange, and 1 week post-NS exchange. Four gas samples were taken from each chamber over 1 h, at 20-min intervals utilizing a polypropylene syringe to draw 30 cm3 of air from within the chambers through the sampling port. For transport, gas samples were deposited into previously vacuumed 20-ml glass vials with magnetic screw caps and silicone/PTFE septa (model N 18, Macherey-Nagel GmbH & Co KG, Düren, Germany). Prior to sampling, the vacuum in the vials was checked using a handheld manometer with a needle connected to the inlet and only vials with a pressure < 100 mbar were utilized. To avoid contaminations from ambient air, the vials were overpressurized (ca. 1500 mbar) with sample air and gas analyses were carried out on the day of sampling. Gas analyses were performed at the Albrecht Daniel Thaer-Institute, Humboldt University of Berlin, using a gas chromatograph (GC 2010 Plus, Shimadzu Corporation, Kyoto, Japan) with an electron capture detector (ECD), a thermal conductivity detector (TCD), and a flame ionization detector (FID).
Data transformations and statistical analysis
One-way ANOVA and Tukey HSD mean separation were performed with Statistica (version 13.2, Dell Inc. 2016). Fisher LSD test was used for the cumulative N2O and CO2 emissions due to the unevenly distributed dataset. Linear mixed-effects models (LMMs) were performed using the R software (version 3.6.2) and the “lme4” package (version 1.1.21) in order to determine the relationship between N2O emissions, treatment type, and sampling date. In the LMM treatment and sampling date were set as fixed effects, and row/replicate as a random effect. Prior to analysis, data was log(+1)-transformed to fulfil the requirements of LMMs (i.e., normality and homogeneity of variances). A post hoc Tukey test was performed on the full model (including treatment type, sampling date, and their interaction) using the R package “emmeans” (version 1.4.4). N fluxes were calculated based on experimental plant density, using the R software (version 3.5.1) and the “gasfluxes” package (version 0.4.3), automatically selecting for the best fit model from either linear, robust linear, and nonlinear regressions. The use of nonlinear regression was restricted, as suggested by the package authors, by taking into account a measurement precision of the GC system of ± 10% for N2O and ± 2% for CO2 and CH4. Cumulative N2O emissions were calculated by linear interpolation between sampling days and summing up daily N2O emission rates over the entire experimental period (trapezoidal method). N2O emission factors were calculated based on cumulative N2O emissions and the total amount of N taken up by plants during the experiment. Total plant N uptake was used instead of the applied amount of N to calculate emission factors, because a large share (approx. 50–70%) of added N fertilizers was discarded at each nutrient solution exchange. To calculate total plant N uptake, it was assumed that root biomass had the same dry matter N concentration as above ground biomass.
Challenges
Following the switch from adaptation NS to the alternative fertilizers, an iron deficiency was observed in row 10 (NPK) for reasons unknown. For 2 weeks, this row received two additional doses of iron chelate, 2 g and 1 g, respectively. Additionally, a temporary pump failure in row 11 (S+V) during harvesting phase caused wilting and stunted growth. For this reason, rows 10 and 11 were removed from statistical analysis of NPK yield, biomass, fruit quality, and nutrient uptake (n = 3). With the beginning of the fertilizer treatments, the dose of “Crop” was too low due to a technical error. Hence, the CRO treatment received a lower N supply for the first 14 days (out of 64 days), but sufficient amount of macro and micro nutrients. This error was noted, and the application rate was adapted accordingly.