Abstract
Cariogenic biofilms have a matrix rich in exopolysaccharides (EPS), mutans and dextrans, that contribute to caries development. Although several physical and chemical treatments can be employed to remove oral biofilms, those are only partly efficient and use of biofilm-degrading enzymes represents an exciting opportunity to improve the performance of oral hygiene products. In the present study, a member of a glycosyl hydrolase family 66 from Flavobacterium johnsoniae (FjGH66) was heterologously expressed and biochemically characterized. The recombinant FjGH66 showed a hydrolytic activity against an early EPS-containing S. mutans biofilm, and, when associated with a α-(1,3)-glucosyl hydrolase (mutanase) from GH87 family, displayed outstanding performance, removing more than 80% of the plate-adhered biofilm. The mixture containing FjGH66 and Prevotella melaninogenica GH87 α-1,3-mutanase was added to a commercial mouthwash liquid to synergistically remove the biofilm. Dental floss and polyethylene disks coated with biofilm-degrading enzymes also degraded plate-adhered biofilm with a high efficiency. The results presented in this study might be valuable for future development of novel oral hygiene products.
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References
Bowen WH, Burne RA, Wu H, Koo H (2018) Oral biofilms: pathogens, Matrix, and Polymicrobial interactions in Microenvironments. Trends Microbiol 26(3):229–242
Camilo CM, Polikarpov I (2014) High-throughput cloning, expression and purification of glycoside hydrolases using ligation-independent cloning (LIC). Protein Expr Purif 99:35–42. https://doi.org/10.1016/J.PEP.2014.03.008
Catlin BW (1956) Extracellular deoxyribonucleic acid of bacteria and a deoxyribonuclease inhibitor. Sci (80-) 124:441–442. https://doi.org/10.1126/SCIENCE.124.3219.441/ASSET/3B67BF7D-6E2B-4CCD-80CB-AFF8FFDE10FB/ASSETS/SCIENCE.124.3219.441.FP.PNG
Cortez AA, de Queiroz MX, de Oliveira Arnoldi Pellegrini V et al (2023) Recombinant Prevotella melaninogenica α-1,3 glucanase and Capnocytophaga ochracea α-1,6 glucanase as enzymatic tools for in vitro degradation of S. mutans biofilms. World J Microbiol Biotechnol 39. https://doi.org/10.1007/S11274-023-03804-Z
Costa Oliveira BE, Cury JA, Ricomini Filho AP (2017) Biofilm extracellular polysaccharides degradation during starvation and enamel demineralization. PLoS ONE 12(7):e0181168. https://doi.org/10.1371/journal.pone.0181168PMID: 28715508; PMCID: PMC5513492
Drula E, Garron ML, Dogan S et al (2022) The carbohydrate-active enzyme database: functions and literature. Nucleic Acids Res 50:D571–D577. https://doi.org/10.1093/nar/gkab1045
Janson JC (1975) Studies on dextran degrading enzymes. Solubilization of the surface bound dextranase of Cytophaga johnsonii by proteolytic enzymes, snake venoms and detergents. J Gen Microbiol 88:209–217. https://doi.org/10.1099/00221287-88-2-209/CITE/REFWORKS
Jepsen S, Blanco J, Buchalla W, Carvalho JC, Dietrich T, Dörfer C, Eaton KA, Figuero E, Frencken JE, Graziani F, Higham SM, Kocher T, Maltz M, Ortiz-Vigon A, Schmoeckel J, Sculean A, Tenuta LM, van der Veen MH, Machiulskiene V (2017) Prevention and control of dental caries and periodontal diseases at individual and population level: consensus report of group 3 of joint EFP/ORCA workshop on the boundaries between caries and periodontal diseases. J Clin Periodontol 44(Suppl 18):S85–S93
Jiao YL, Wang SJ, Lv MS et al (2014) Characterization of a marine-derived dextranase and its application to the prevention of dental caries. J Ind Microbiol Biotechnol 41:17–26. https://doi.org/10.1007/S10295-013-1369-0
Juntarachot N, Sirilun S, Kantachote D et al (2020) Anti-streptococcus mutans and anti-biofilm activities of dextranase and its encapsulation in alginate beads for application in toothpaste. PeerJ 8:1–22. https://doi.org/10.7717/peerj.10165
Kim JK, Shin SY, Moon JS et al (2015) Isolation of dextran-hydrolyzing intestinal bacteria and characterization of their dextranolytic activities. Biopolymers 103:321–327. https://doi.org/10.1002/BIP.22615
Koo H, Falsetta ML, Klein MI (2013) The exopolysaccharide matrix: a virulence determinant of cariogenic biofilm. J Dent Res. ;92(12):1065-73. doi: 10.1177/0022034513504218. Epub 2013 Sep 17. PMID: 24045647; PMCID: PMC3834652
Kuramitsu HK (2003) Molecular Genetic Analysis of the Virulence of Oral Bacterial Pathogens: An Historical Perspective. 14:331–344. https://doi.org/10.1177/154411130301400504
Liu Y, Ren Z, Hwang G, Koo H (2018) Therapeutic strategies targeting Cariogenic Biofilm Microenvironment. Adv Dent Res 29(1):86–92. https://doi.org/10.1177/0022034517736497PMID: 29355421; PMCID: PMC5784482
Liu H, Ren W, Ly M et al (2019) Characterization of an Alkaline GH49 dextranase from Marine Bacterium Arthrobacter oxydans KQ11 and its application in the Preparation of Isomalto-Oligosaccharide. Mar Drugs 2019 17:17479. https://doi.org/10.3390/MD17080479
Marsh PD, Moter A, Devine DA (2011) Dental plaque biofilms: communities, conflict and control. Periodontol 2000. ;55(1):16–35. https://doi.org/10.1111/j.1600-0757.2009.00339.x. PMID: 21134226
Mattos-Graner RO, Zelante F, Line RC, Mayer MP (1998) Association between caries prevalence and clinical, microbiological and dietary variables in 1.0 to 2.5-year-old Brazilian children. Caries Res.;32(5):319–23. https://doi.org/10.1159/000016466. PMID: 9701655
Mattos-Graner RO, Smith DJ, King WF, Mayer MP (2000) Water insoluble glucan synthesis by mutans streptococcal strains correlates with caries incidence in 12- to 30-month-old children. J Dent Res.;79(6):1371-7. https://doi.org/10.1177/00220345000790060401. PMID: 10890715
Miller GL (1959a) Use of Dinitrosalicylic Acid Reagent for determination of reducing Sugar. Anal Chem 31:426–428. https://doi.org/10.1021/ac60147a030
Miller GL (1959b) Use of DinitrosaIicyIic Acid Reagent for determination of reducing Sugar. Anal Chem 3:426–428
Mukasa H, Slade HD (1973) Mechanism of adherence of Streptococcus mutans to smooth surfaces I. roles of Insoluble Dextran-Levan synthetase enzymes and cell Wall Polysaccharide Antigen in Plaque formation. Infect Immun 8:555–562. https://doi.org/10.1128/IAI.8.4.555-562.1973
Nakamura S, Kurata R, Tonozuka T et al (2023) Bacteroidota polysaccharide utilization system for branched dextran exopolysaccharides from lactic acid bacteria. J Biol Chem 299:104885. https://doi.org/10.1016/J.JBC.2023.104885
Netsopa S, Niamsanit S, Araki T et al (2019) Purification and characterization including Dextran Hydrolysis of Dextranase from Aspergillus Allahabadii X26. Sugar Tech 21:329–340. https://doi.org/10.1007/S12355-018-0652-9/FIGURES/7
Nielsen H (2017) Predicting secretory proteins with SignalP. Protein Funct Predict Methods Protoc 59–73
Nobre dos Santos M, Melo dos Santos L, Francisco SB, Cury JA (2002 Sep-Oct) Relationship among dental plaque composition, daily sugar exposure and caries in the primary dentition. Caries Res 36(5):347–352. https://doi.org/10.1159/000065959PMID:12399695
Ogawa A, Furukawa S, Fujita S et al (2011) Inhibition of Streptococcus mutans biofilm formation by Streptococcus salivarius FruA. Appl Environ Microbiol 77:1572–1580. https://doi.org/10.1128/AEM.02066-10/ASSET/BA92FAC9-DFBC-49AA-8CF7-B1800790B233/ASSETS/GRAPHIC/ZAM9991018780005.JPEG
Okshevsky M, Regina VR, Meyer RL (2015) Extracellular DNA as a target for biofilm control. Curr Opin Biotechnol 33:73–80. https://doi.org/10.1016/J.COPBIO.2014.12.002
Ölçer Z, Tanriseven A (2010) Co-immobilization of dextransucrase and dextranase in alginate. Process Biochem 45:1645–1651. https://doi.org/10.1016/j.procbio.2010.06.011
Paes Leme AF, Koo H, Bellato CM et al (2006) The role of sucrose in cariogenic dental biofilm formation - new insight. J Dent Res 85:878–887. https://doi.org/10.1177/154405910608501002
Pitts NB, Zero DT, Marsh PD et al (2017) Dental caries. Nat Rev Dis Prim 3. https://doi.org/10.1038/nrdp.2017.30
Pleszczyńska M, Wiater A, Janczarek M, Szczodrak J (2015) (1→3)-α-D-Glucan hydrolases in dental biofilm prevention and control: a review. Int J Biol Macromol 79:761–778
Pulkownik A, Walker GJ (1977) Purification and substrate specificity of an endo-dextranase of Streptococcus mutans K1-R. Carbohydr Res 54:237–251. https://doi.org/10.1016/S0008-6215(00)84814-4
Ren W, Wang S, Lü M et al (2016a) Optimization of four types of antimicrobial agents to increase the inhibitory ability of marine arthrobacter oxydans KQ11 dextranase mouthwash. Chin J Oceanol Limnol 34:354–366. https://doi.org/10.1007/S00343-015-4376-3/METRICS
Ren Z, Cui T, Zeng J et al (2016b) Molecule targeting glucosyltransferase inhibits Streptococcus mutans biofilm formation and virulence. Antimicrob Agents Chemother 60:126–135. https://doi.org/10.1128/AAC.00919-15/SUPPL_FILE/ZAC001164693SO1.PDF
Sufiate BL, Soares FEF, Gouveia AS et al (2018) Statistical tools application on dextranase production from pochonia chlamydosporia (Vc4) and its application on dextran removal from sugarcane juice. Acad Bras Cienc 90:461–470. https://doi.org/10.1590/0001-3765201820160333
Sugiura M, Ito A, Ogiso T et al (1973) Studies on dextranase: purification of dextranase from Penicillium Funiculosum and its enzymatic properties. Biochim Biophys Acta - Enzymol 309:357–362. https://doi.org/10.1016/0005-2744(73)90034-X
Suzuki N, Kim YM, Fujimoto Z et al (2012a) Structural elucidation of dextran degradation mechanism by streptococcus mutans dextranase belonging to glycoside hydrolase family 66. J Biol Chem 287:19916–19926. https://doi.org/10.1074/JBC.M112.342444
Suzuki R, Terasawa K, Kimura K et al (2012b) Biochemical characterization of a novel cycloisomaltooligosaccharide glucanotransferase from Paenibacillus sp. 598K. Biochim Biophys Acta - Proteins Proteom 1824:919–924. https://doi.org/10.1016/j.bbapap.2012.04.001
Suzuki N, Fujimoto Z, Kim YM et al (2014) Structural elucidation of the cyclization mechanism of α-1,6-Glucan by Bacillus circulans T-3040 Cycloisomaltooligosaccharide glucanotransferase. J Biol Chem 289:12040–12051. https://doi.org/10.1074/jbc.M114.547992
Suzuki N, Kishine N, Fujimoto Z et al (2015) Crystal structure of thermophilic dextranase from Thermoanaerobacter pseudethanolicus. J Biochem 159:331–339. https://doi.org/10.1093/jb/mvv104
Tamura H, Yamada A, Kato H (2007) Identification and characterization of a dextranase gene of Streptococcus criceti. Microbiol Immunol 51:721–732. https://doi.org/10.1111/J.1348-0421.2007.TB03961.X
Terrapon N, Lombard V, Drula E et al (2017) The CAZy Database/the carbohydrate-active enzyme (CAZy) database: principles and usage guidelines. In: a practical guide to using Glycomics databases. Springer Japan, Tokyo, pp 117–131
Untergasser A, Cutcutache I, Koressaar T et al (2012) Primer3-new capabilities and interfaces. Nucleic Acids Res 40:1–12. https://doi.org/10.1093/nar/gks596
Funding
Maria Júlia Pozelli Macedo is a recipient of Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP) scientific initiation scholarship (grant number 2023/10037-0), Pedro Ricardo Vieira Hamann is recipient of FAPESP postdoctoral fellowship (grant number 2023/07897-8), Igor Polikarpov is recipient of Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq) grants # 306852/2021-7 and 440180/2022-8 and FAPESP grant number 2021/08780-1.
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M.J.P.M. did experimental work, data acquisition, data analysis and original draft writing. M.Q. concieved study conception and design, establishing S. mutans biofilm growth protocols. A.N.G.D. did bioinformatic analysis and primer design. A.P.R.F. participated in study conception and design, and contributed S. mutans strain, establishing biofilms growth protocols. P.R.V.H. contributed with the study conception and design, original draft writing, data acquisition, data analysis. I.P. participated in study conception and design, data analysis, data verification, manuscript writing, supervision, and grant acquisition. All authors commented on previous versions of the manuscript. All authors read and approved the final manuscript.
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Pozelli Macedo, M.J., Xavier-Queiroz, M., Dabul, A.N.G. et al. Biochemical properties of a Flavobacterium johnsoniae dextranase and its biotechnological potential for Streptococcus mutans biofilm degradation. World J Microbiol Biotechnol 40, 201 (2024). https://doi.org/10.1007/s11274-024-04014-x
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DOI: https://doi.org/10.1007/s11274-024-04014-x