Abstract
5-Enopyruvylshikimate-3-phosphate synthase (EPSP synthase) is an important enzyme in the shikimate pathway mediating the biosynthesis of aromatic compounds in plants and microorganisms. A novel class II EPSP synthase AroA S. fredii from Sinorhizobium fredii NGR234 was overexpressed in Escherichia coli BL21. It was purified to homogeneity and its catalytic properties were studied. The enzyme exhibited optimum catalytic activity at pH 8.0 and 50 °C. It was stable below 40 °C, and over a broad range of pH 5.0–9.0. The EPSP synthase was increasingly activated by 100 mM of the chlorides of NH4 +, K+, Na+ and Li+. Kinetic analysis of AroA S. fredii suggested that the enzyme exhibited a high glyphosate tolerance and high level of affinity for phosphoenolpyruvate, which indicates the enzyme with a high potential for structural and functional studies and its potential usage for the generation of transgenic crops resistant to the herbicide.
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References
Du W, Wallis NG, Mazzulla MJ et al (2001) Characterization of Streptococcus pneumoniae 5-enolpyruvylshikimate 3-phosphate synthase and its activation by univalent cations. Eur J Biochem 267(1):222–227. doi:10.1046/j.1432-1327.2000.00994.x
Eschenburg S, Healy ML, Priestman MA et al (2002) How the mutation glycine96 to alanine confers glyphosate insensitivity to 5-enolpyruvyl shikimate-3-phosphate synthase from Escherichia coli. Planta 216(1):129–135. doi:10.1007/s00425-002-0908-0
Franz JE, Mao MK, Sikorski JA (1997) Glyphosate: a unique global herbicide. American Chemical Society Monograph 189, Washington
Funke T, Han H, Healy-Fried ML et al (2006) Molecular basis for the herbicide resistance of Roundup Ready crops. Proc Natl Acad Sci USA 103(35):13010–13015. doi:10.1073/pnas.0603638103
He M, Yang ZY, Nie YF et al (2001) A new type of class I bacterial 5-enopyruvylshikimate-3-phosphate synthase mutants with enhanced tolerance to glyphosate. Biochim Biophys Acta 1568(1):1–6. doi:10.1016/S0304-4165(01)00181-7
He M, Nie YF, Xu P (2003) A T42M Substitution in bacterial 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) generates enzyme with increased resistance to glyphosate. Biosci Biotechnol Biochem 67(6):1405–1409
Jin D, Lu W, Ping S et al (2007) Identification of a new gene encoding EPSPS with high glyphosate resistance from the metagenomic library. Curr Microbiol 55(4):350–355. doi:10.1007/s00284-007-0268-x
Lanzetta PA, Alvarez LJ, Reinach PS et al (1979) An improved assay for nanomole amounts of inorganic phosphate. Anal Biochem 100(1):95–9722. doi:10.1016/0003-2697(79)90115-5
Murray EE, Lotzer J, Eberle M (1989) Codon usage in plant genes. Nucleic Acids Res 17(2):477–498. doi:10.1093/nar/17.2.477
Padgette SR, Huynh QK, Aykent S et al (1988) Identification of the reactive cysteines of Escherichia coli 5-enolpyruvylshikimate-3-phosphate synthase and their nonessentiality for enzymatic catalysis. J Biol Chem 263(4):1798–1802
Park HJ, Hilsenbeck JL, Kim HJ et al (2004) Structural studies of Streptococcus pneumoniae EPSP synthase in unliganded state, tetrahedral intermediate-bound state and S3P-GLP-bound state. Mol Microbiol 51(4):963–971. doi:10.1046/j.1365-2958.2003.03885.x
Peng RH, Xiong AS, Yao QH (2006) A direct and efficient PAGE-mediated overlap extension PCR method for gene multiple-site mutagenesis. Appl Microbiol Biotechnol 73(1):234–240. doi:10.1007/s00253-006-0583-3
Priestman MA, Healy ML, Funke T et al (2005a) Molecular basis for the glyphosate-insensitivity of the reaction of 5-enolpyruvylshikimate 3-phosphate synthase with shikimate. FEBS Lett 579(25):5773–5780. doi:10.1016/j.febslet.2005.09.066
Priestman MA, Funke T, Singh IM et al (2005b) 5-enolpyruvylshikimate-3-phosphate synthase from Staphylococcus aureus is insensitive to glyphosate. FEBS Lett 579(3):728–732. doi:10.1016/j.febslet.2004.12.057
Schönbrunn E, Eschenburg S, Shuttleworth WA et al (2001) Interaction of the herbicide glyphosate with its target enzyme 5-enolpyruvylshikimate 3-phosphate synthase in atomic detail. Proc Natl Acad Sci USA 98(4):1376–1380. doi:10.1073/pnas.98.4.137698/4/1376
Stauffer ME, Young JK, Helms GL et al (2001) Chemical shift mapping of shikimate-3-phosphate binding to the isolated N-terminal domain of 5-enolpyruvylshikimate-3-phosphate synthase. FEBS Lett 499(1–2):182–186. doi:10.1016/S0014-5793(01)02555-8
Steinrücken HC, Amrhein N (1980) The herbicide glyphosate is a potent inhibitor of 5-enolpyruvyl-shikimic acid-3-phosphate synthase. Biochem Biophys Res Commun 94(4):1207–1212. doi:10.1016/0006-291X(80)90547-1
Steinrüecken HC, Amrhein N (1984) 5-enolpyruvylshikimate-3-phosphate synthase of Klebsiella pneumoniae. Eur J Biochem 143(2):341–349. doi:10.1111/j.1432-1033.1984.tb08378.x
Sun YC, Chen YC, Tian ZX et al (2005) Novel AroA with high tolerance to glyphosate, encoded by a gene of Pseudomonas putida 4G-1 isolated from an extremely polluted environment in China. Appl Environ Microbiol 71(8):4771–4776. doi:10.1128/AEM.71.8.4771-4776.2005
Tian YS, Xiong AS, Xu J et al (2010) Isolation from Ochrobactrum anthropi of a novel class II 5-nopyruvylshikimate-3-phosphate synthase with high tolerance to glyphosate. Appl Environ Microbiol 76(17):6001–6005. doi:10.1128/AEM.00770-10
Tian YS, Xu J, Xiong AS et al (2011) Improvement of glyphosate resistance through concurrent mutations in three amino acids of the Ochrobactrum 5-enopyruvylshikimate-3-phosphate synthase. Appl Environ Microbiol 77(23):8409–8414. doi:10.1128/AEM.05271-11
Tian YS, Xu J, Xiong AS et al (2012) Functional characterization of class II 5-enopyruvylshikimate-3-phosphate synthase from Halothermothrix orenii H168 in Escherichia coli and transgenic Arabidopsis. Appl Microbiol Biotechnol 93(1):241–250. doi:10.1007/s00253-011-3443-8
Vaithanomsat P, Brown KA (2007) Isolation and mutation of recombinant EPSP synthase from pathogenic bacteria Pseudomonas aeruginosa. Process Biochem 42(4):592–598. doi:10.1016/j.procbio.2006.11.006
Xiong AS, Yao QH, Peng RH et al (2006) PCR-based accurate synthesis of long DNA sequences. Nat Protoc 1(2):791–797. doi:10.1038/nprot.2006.103
Xiong AS, Peng RH, Liu JG et al (2007) High efficiency and throughput system in directed evolution in vitro of reporter gene. Appl Microbiol Biotechnol 74(1):160–168. doi:10.1007/s00253-006-0659-0
Xu J, Tian YS, Peng RH et al (2010) AtCPK6, a functionally redundant and positive regulator involved in salt/drought stress tolerance in Arabidopsis. Planta 231(6):1251–1260. doi:10.1007/s00425-010-1122-0
Xu H, Xiong AS, Zhao W et al (2011) Characterization of a glucose-, xylose-, sucrose-, and D-galactose-stimulated β-glucosidase from the alkalophilic bacterium Bacillus halodurans C-125. Curr Microbiol 62(3):833–83921. doi:10.1007/s00284-010-9766-3
Yu H, Yang Q, Li L (2006) Characterization of 5-enolpyruvylshikimate-3-phosphate synthase from Sclerotinia sclerotiorum. Chin J Biochem Mol Biol 22(4):301–307
Zhou CY, Tian YS, Xu ZS et al (2012) Identification of a new gene encoding 5-enolpyruvylshikimate-3-phosphate synthase using genomic library construction strategy. Mol Biol Rep 39(12):10939–10947. doi:10.1007/s11033-012-1994-0
Acknowledgments
The research was supported by the Key Project Fund of the Shanghai Municipal Committee of Agriculture (No. 2011-1-8), International Scientific and Technological Cooperation (2010DFA62320, 11230705900), the Youth Fund of Shanghai Academy of Agricultural Sciences (2012-16, 2013-16), National Natural Science Foundation (31071486) and the Key Project Fund of Shanghai Minhang Science and Technology Committee (2012MH059).
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Wang, L., Peng, R., Tian, Y. et al. Characterization of a class II 5-enopyruvylshikimate-3-phosphate synthase with high tolerance to glyphosate from Sinorhizobium fredii . World J Microbiol Biotechnol 30, 2967–2973 (2014). https://doi.org/10.1007/s11274-014-1724-y
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DOI: https://doi.org/10.1007/s11274-014-1724-y