Abstract
By constructing a genomic library, a new gene encoding β-glucosidase (Bgl1C) was cloned from Exiguobacterium oxidotolerans A011, which was isolated from deep sea mud. The putative β-glucosidase gene consisted of an open reading frame (ORF) of 1,347 nucleotides, and encoded a protein of 448 amino acids with a predicted molecular weight of 51.6 kDa. Bgl1C belonged to the glycoside hydrolase family 1, and the deduced amino acid sequence displayed the highest identity (68%) to the β-glucosidase from Bacillus coahuilensis m4-4. Optimal conditions for activity were pH 7 and a temperature of 35°C and Bgl1C was stable in buffers ranging from pH 6.6 to 9. The specific activity, K m, and V max for the substrate p-nitrophenyl-β-d-glucopyranoside were 41 U mg−1, 1.72 mg ml−1 and 0.45 μg ml−1 s−1, respectively. Na+, Ca2+, EDTA and β-mercaptoethanol had no effect on the activity, while Hg2+, Cu2+, Co2+ strongly inhibited it. It is noteworthy that Bgl1C is a cold active enzyme that retains about 61% of its maximum activity at 10°C. Structural model of Bgl1C revealed that some amino acids (glycine, alanine, serine, valine) concerned with plasticity and flexibility were located around the active sites, this may contributed to the cold adaption of Bgl1C. These favorable features make Bgl1C a potential candidate for various industrial applications.
Similar content being viewed by others
References
An CL, Lim WJ, Hong SY, Kim EJ, Shin EC, Kim MK, Lee JR, Park SR, Woo JG, Lim YP (2004) Analysis of bgl operon structure and characterization of β-glucosidase from Pectobacterium carotovorum subsp. Carotovorum ly34. Biosci Biotech Biochem 68:2270–2278
Barrett T, Suresh CG, Tolley SP, Dodson EJ, Hughes MA (1995) The crystal structure of a cyanogenic β-glucosidase from white clover, a family 1 glycosyl hydrolase. Structure 3:951–960
Bauvois C, Jacquamet L, Huston AL, Borel F, Feller G, Ferrer JL (2008) Crystal structure of the cold-active aminopeptidase from colwellia psychrerythraea, a close structural homologue of the human bifunctional leukotriene A4 hydrolase. J Biol Chem 283:23315–23325
Beguin P, Aubert JP (1994) The biological degradation of cellulose. FEMS Microbiol Rev 13:25–58
Bhatia Y, Mishra S, Bisaria VS (2002) Microbial beta-glucosidases: cloning, properties, and applications. Crit Rev Biotechnol 22:375–407
Cai Y, Buswell J, Chang S (1998) β-Glucosidase components of the cellulolytic system of the edible straw mushroom, Volvariella volvacea. Enzyme Microb Tech 22:122–129
Collins T, Meuwis MA, Stals I, Claeyssens M, Feller G, Gerday C (2002) A novel family 8 xylanase, functional and physicochemical characterization. J Biol Chem 277:35133–35139
Eberhart B, Cross D, Chase L (1964) β-glucosidase system of neurospora crassai. β-glucosidase and cellulase activities of mutant and wild-type strains. J Bacteriol 87:761–770
Fu XY, Liu PF, Lin L, Hong YZ, Huang XL, Meng X, Liu ZD (2009) A novel endoglucanase (Cel9P) from a marine bacterium Paenibacillus sp. BME-14. Appl Biochem Biotechnol 0273:1599–1691
Gaur R, Pant H, Jain R, Khare SK (2006) Galacto-oligosaccharide synthesis by immobilized Aspergillus oryzae β-galactosidase. Food Chem 97:426–430
Georlette D, Blaise V, Collins T, D’Amico S, Gratia E, Hoyoux A, Marx JC, Sonan G, Feller G, Gerday C (2004) Some like it cold: biocatalysis at low temperatures. FEMS Microbiol Rev 28:25–42
Gerday C, Aittaleb M, Bentahir M, Chessa J, Claverie P, Collins T, D’Amico S, Dumont J, Garsoux G, Georlette D (2000) Cold-adapted enzymes: from fundamentals to biotechnology. Trends Biotechnol 18:103–107
Gonzalez-Blasco G, Sanz-Aparicio J, Gonzalez B, Hermoso JA, Polaina J (2000) Directed evolution of beta-glucosidase A from Paenibacillus polymyxa to thermal resistance. J Biol Chem 275:13012–13708
Gonzalez-Candelas L, Gil J, Lamuela-Raventos R, Ramon D (2000) The use of transgenic yeasts expressing a gene encoding a glycosyl-hydrolase as a tool to increase resveratrol content in wine. Int J Food Microbiol 59:179–183
Gräbnitz F, Rücknagel K, Sei M, Staudenhauer W (1989) Nucleotide sequence of the Clostridium thermocellum bglb gene encoding thermostable β-glucosidase b: Homology to fungal β-glucosidases. Mol Gen Genet 217:70–76
Harada KM, Tanaka K, Fukuda Y, Hashimoto W, Murata K (2005) Degradation of rice bran hemicellulose by Paenibacillus sp. Strain hc1: gene cloning, characterization and function of β-d-glucosidase as an enzyme involved in degradation. Arch Microbiol 184:215–224
Henrissat B, Asim E (2001) Crystal structure of a monocotyledon (maize zmglu1) β-glucosidase and a model of its complex with p-nitrophenyl β-d-thioglucoside. Biochem J 354:37–46
Isorna P, Polaina J, Latorre-García L, Cañada FJ, González B, Sanz-Aparicio J (2007) Crystal structures of Paenibacillus polymyxa β-glucosidase B complexes reveal the molecular basis of substrate specificity and give new insights into the catalytic machinery of family I glycosidases. J Mol Biol 371:1204–1218
King GM (1986) Characterization of β-glucosidase activity in intertidal marine sediments. Appl Environ Microb 51:373–380
Kitahata S, Sedagawa S (1987) Cyclic (1 → 2)-β-d-glucan-hydrolyzing enzymes from Acremonium sp. 15 purification and some properties of endo-(1 → 2)-β-d-glucanase and β-d-glucosidase. Agric Biol Chem 51:2701–2708
Kuo LC, Lee KT (2008) Cloning, expression, and characterization of two beta-glucosidases from isoflavone glycoside-hydrolyzing bacillus subtilis natto. J Agric Food Chem 56:119–125
Lin L, Meng X, Liu PF, Hong YZ, Wu GB, Huang XL, Li CC, Dong JL, Xiao L, Liu ZD (2009) Improved catalytic efficiency of Endo-β-1, 4-glucanase from Bacillus subtilis BME-15 by directed evolution. Appl Microbiol Biotechnol 82:671–679
Marques AR, Coutinho PM, Videira P, Fialho AM, Sá-Correia I (2003) Sphingomonas paucimobilis beta-glucosidase Bgl1: a member of a new bacterial subfamily in glycoside hydrolase family 1. Biochem J 370:793
Martinez-Villaluenga C, Cardelle-Cobas A, Corzo N, Olano A, Villamiel M (2008) Optimization of conditions for galactooligosaccharide synthesis during lactose hydrolysis by β-galactosidase from Kluyveromyces lactis (Lactozym 3000 L HP G). Food Chem 107:258–264
Onishi N, Tanaka T (1995) Purification and properties of a novel thermostable galacto-oligosaccharide-producing beta-galactosidase from Sterigmatomyces elviae CBS8119. Appl Environ Microb 61:4026
Park TH, Choi KW, Park CS, Lee SB, Kang HY, Shon KJ, Park JS, Cha J (2005) Substrate specificity and transglycosylation catalyzed by a thermostable β-glucosidase from marine hyperthermophile thermotoga neapolitana. Appl Microbiol Biot 69:411–422
Sako T, Matsumoto K, Tanaka R (1999) Recent progress on research and applications of non-digestible galacto-oligosaccharides. Int Dairy J 9:69–80
Sarney D, Vulfson E (1995) Application of enzymes to the synthesis of surfactants. Trends Biotechnol 13:164–172
Shipkowski S, Brenchley JE (2005) Characterization of an unusual cold-active β-glucosidase belonging to family 3 of the glycoside hydrolases from the psychrophilic isolate Paenibacillus sp. strain C7. Appl Environ Microb 71:4225
Siddiqui KS, Cavicchioli R (2006) Cold-adapted enzymes. Annu Rev Biochem 75:403–433
Valjamae P, Pettersson G, Johansson G (2001) Mechanism of substrate inhibition in cellulose synergistic degradation. Eur J Biochem 268:520–526
Van Petegem F, Collins T, Meuwis MA, Gerday C, Feller G, Van Beeumen J (2003) The structure of a cold-adapted family 8 xylanase at 1.3 Å resolution. Structural adaptations to cold and investigation of the active site. J Biol Chem 278:7531–7539
Zaldivar J, Nielsen J, Olsson L (2001) Fuel ethanol production from lignocellulose: a challenge for metabolic engineering and process integration. Appl Microbiol Biotechnol 56:17–34
Zouhar J, Vevodova J, Marek J, Damborsky J, Su XD, Brzobohaty B (2001) Insights into the functional architecture of the catalytic center of a maize β-glucosidase zm-p60.1. Plant Physiol 127:973–985
Acknowledgments
We thank Dr. Qifa Zhang for many valuable suggestions. This work was supported by grants from the National Natural Sciences Foundation of China (30770021 and 30570057) and the 111 project (B07041).
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Chen, S., Hong, Y., Shao, Z. et al. A cold-active β-glucosidase (Bgl1C) from a sea bacteria Exiguobacterium oxidotolerans A011. World J Microbiol Biotechnol 26, 1427–1435 (2010). https://doi.org/10.1007/s11274-010-0317-7
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s11274-010-0317-7