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Crystal structure of mouse RhoA:GTPγS complex in a centered lattice

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Journal of Structural and Functional Genomics

Abstract

RhoA, a member of the Rho sub-family of small GTPases, plays a significant signaling role in cell morphogenesis, migration, neuronal development, cell division and adhesion. So far, 4 structures of RhoA:GDP/GTP analogs and 14 structures of RhoA in complex with other proteins have been reported. All RhoA:GDP/GTP analog complexes have been crystallized in primitive lattices and RhoA is monomeric. This is the first time a RhoA:GTP analog complex has been crystallized as a dimer in a centered lattice. The present structure reveals structural differences in the switch-I (residues 28–42) and switch-II (residues 61–66) regions, which play important roles in interactions with downstream targets to transduce signals, when compared to the previously reported structures.

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References

  1. Aktories K (1997) Trends Microbiol 5:282–288

    Article  PubMed  CAS  Google Scholar 

  2. Chen Z, Medina F, Liu MY, Thomas C, Sprang SR, Sternweis PC (2010) J Biol Chem 285:21070–21081

    Article  PubMed  CAS  Google Scholar 

  3. Delano WL (2002) The PyMOL molecular graphics system. DeLano Scientific LLC, San Carlos, CA, USA

  4. Emsley P, Cowtan K (2004) Acta Crystallogr D Biol Crystallogr 60:2126–2132

    Article  PubMed  Google Scholar 

  5. Gamblin SJ, Smerdon SJ (1998) Curr Opin Struct Biol 8:195–201

    Article  PubMed  CAS  Google Scholar 

  6. Genth H, Schmidt M, Gerhard R, Aktories K, Just I (2003) Biochem Biophys Res Commun 302:127–132

    Article  PubMed  CAS  Google Scholar 

  7. Gouet P, Courcelle E, Stuart D, Métoz F (1999) Bioinformatics 15:305–308

    Article  PubMed  CAS  Google Scholar 

  8. Heasman SJ, Ridley AJ (2008) Nat Rev Mol Cell Biol 9:690–701

    Article  PubMed  CAS  Google Scholar 

  9. Henrick K, Thornton JM (1998) Trends Biochem Sci 23:358–361

    Article  PubMed  CAS  Google Scholar 

  10. Ihara K, Muraguchi S, Kato M, Shimizu T, Shirakawa M, Kuroda S, Kaibuchi K, Hakoshima T (1998) J Biol Chem 273:9656–9666

    Article  PubMed  CAS  Google Scholar 

  11. Jaffe AB, Hall A (2005) Annu Rev Cell Dev Biol 21:247–269

    Article  PubMed  CAS  Google Scholar 

  12. Krissinel E, Henrick K (2007) J Mol Biol 372:774–797

    Article  PubMed  CAS  Google Scholar 

  13. Larkin M, Blackshields G, Brown N, Chenna R, McGettigan P, McWilliam H, Valentin F, Wallace I, Wilm A, Lopez R, Thompson J, Gibson T, Higgins D (2007) Bioinformatics 23:2947–2948

    Article  PubMed  CAS  Google Scholar 

  14. Laskowski RA, Hutchinson EG, Michie AD, Wallace AC, Jones ML, Thornton JM (1997) Trends Biochem Sci 22:488–490

    Article  PubMed  CAS  Google Scholar 

  15. Longenecker K, Read P, Derewenda U, Dauter Z, Liu X, Garrard S, Walker L, Somlyo AV, Nakamoto RK, Somlyo AP, Derewenda ZS (1999) Acta Crystallogr D Biol Crystallogr 55:1503–1515

    Article  PubMed  CAS  Google Scholar 

  16. Lutz S, Shankaranarayanan A, Coco C, Ridilla M, Nance MR, Vettel C, Baltus D, Evelyn CR, Neubig RR, Wieland T, Tesmer JJ (2007) Science 318:1923–1927

    Article  PubMed  CAS  Google Scholar 

  17. Matthews B (1968) J Mol Biol 33:491–497

    Article  PubMed  CAS  Google Scholar 

  18. McCoy A (2007) Acta Crystallogr D Biol Crystallogr 63:32–41

    Article  PubMed  Google Scholar 

  19. Mehta D, Ahmmed GU, Paria BC, Holinstat M, Voyno-Yasenetskaya T, Tiruppathi C, Minshall RD, Malik AB (2003) J Biol Chem 278:33492–33500

    Article  PubMed  CAS  Google Scholar 

  20. Miyamoto S, Del Re DP, Xiang SY, Zhao X, Florholmen G, Brown JH (2010) J Cardiovasc Transl Res 3:330–343

    Article  PubMed  Google Scholar 

  21. Otwinowski Z, Minor W (1997) Processing of X-ray diffraction data collected in oscillation mode. In: Carter CW Jr, Sweet RM (eds) Methods in enzymology, vol 276. Macromolecular Crystallography, part A. Academic press, New York, USA, pp 307–326

  22. Pan JY, Wessling-Resnick M (1998) BioEssays 20:516–521

    Article  PubMed  CAS  Google Scholar 

  23. Rittinger K, Walker PA, Eccleston JF, Smerdon SJ, Gamblin SJ (1997) Nature 389:758–762

    Article  PubMed  CAS  Google Scholar 

  24. Scheffzek K, Ahmadian MR, Wittinghofer A (1998) Trends Biochem Sci 23:257–262

    Article  PubMed  CAS  Google Scholar 

  25. Shimizu T, Ihara K, Maesaki R, Kuroda S, Kaibuchi K, Hakoshima T (2000) J Biol Chem 275:18311–18317

    Article  PubMed  CAS  Google Scholar 

  26. Symons M (1996) Trends Biochem Sci 21:178–181

    PubMed  CAS  Google Scholar 

  27. Thodeti CK, Massoumi R, Bindslev L, Sjölander A (2002) Biochem J 365:157–163

    Article  PubMed  CAS  Google Scholar 

  28. Wei Y, Zhang Y, Derewenda U, Liu X, Minor W, Nakamoto RK, Somlyo AV, Somlyo AP, Derewenda ZS (1997) Nat Struct Biol 4:699–703

    Article  PubMed  CAS  Google Scholar 

  29. Zwart PH, Afonine PV, Grosse-Kunstleve RW, Hung LW, Ioerger TR, McCoy AJ, McKee E, Moriarty NW, Read RJ, Sacchettini JC, Sauter NK, Storoni LC, Terwilliger TC, Adams PD (2008) Methods Mol Biol 426:419–435

    Article  PubMed  CAS  Google Scholar 

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Acknowledgments

This project was supported by a grant from Ministry of Education, Singapore to KS. The graduate scholarship for KP was provided by National University of Singapore and CJ is supported by a Life Science Institute grant. The project was conceived by KS, the complex was crystallized by KP and CJ collected data and solved the structure. All three authors prepared the manuscript. The authors declare no financial interest.

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Correspondence to Kunchithapadam Swaminathan.

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Chacko Jobichen and Kuntal Pal are contributed equally.

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Jobichen, C., Pal, K. & Swaminathan, K. Crystal structure of mouse RhoA:GTPγS complex in a centered lattice. J Struct Funct Genomics 13, 241–245 (2012). https://doi.org/10.1007/s10969-012-9143-5

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  • DOI: https://doi.org/10.1007/s10969-012-9143-5

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