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Comparison of the Parallel Tempering Algorithm and Multicanonical Method as Applied to Coarse-Grained Off-lattice Models for Folding Heteropolymers

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Abstract

We have performed Parallel Tempering simulations of hydrophobic-hydrophilic heteropolymers with a simple effective, coarse-grained off-lattice model with the selected monomers and compare the global energy minimums found with Parallel Tempering algorithm with the lowest energy states identified within the multicanonical algorithm.

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  1. Department of Physics Engineering, Ankara University, Tandoğan, Ankara, Turkey

    Handan Arkin

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  1. Handan Arkin
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Correspondence to Handan Arkin.

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Arkin, H. Comparison of the Parallel Tempering Algorithm and Multicanonical Method as Applied to Coarse-Grained Off-lattice Models for Folding Heteropolymers. J Stat Phys 139, 326–332 (2010). https://doi.org/10.1007/s10955-010-9942-7

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  • DOI: https://doi.org/10.1007/s10955-010-9942-7

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