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Whole Molecule Disorder in a Solid Solution of Two Indoloacridines

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Abstract

Dehydrogenation of a 5,6-dihydro-acridine with palladium on carbon led to partial dehydrochlorination and formation of a mixture of two indolacridines C26H17ClN2 and C26H18N2 which are only distinguished by substitution of a chlorine by hydrogen atom. They co-crystallize from ethanol as a solid solution of the two compounds with ratios between 90:10 and 42:58 by whole molecule disorder in a triclinic \(P \bar {1}\) setting. Unit cell dimensions for a crystal with a 0.615(2) to 0.305(2) ratio are a = 9.1952(16), b = 10.2589(18), and c = 10.6268(19) Å, and α = 79.688(3), β = 67.156(3), and γ = 86.897(3)°. The replacement of chlorine by the smaller hydrogen causes all atoms of both molecules to be shifted against each other within the unit cell by 0.3–0.4 Å. The structure is thus a rarely reported example of a true solid solution of two chemically distinct organic compounds. Weak packing forces (C–H···Cl, C–H···π and π···π stacking interactions) give the structure enough flexibility to accommodate the co-crystallization of the two spatially different molecules.

Graphical Abstract

Two indolacridines C26H17ClN2 and C26H18N2 only distinguished by substitution of a chlorine by hydrogen atom co-crystallize by whole molecule disorder to form a solid solution of the two compounds. They take up the same volume within the unit cell with occupancies between 90 and 42% for the chlorinated derivative. The replacement of chlorine by the smaller hydrogen causes all atoms of both molecules to be shifted against each other within the unit cell by 0.3–0.4 Å. The structure is thus a rarely reported example of a solid solution of two chemically distinct organic compounds.

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References

  1. Humphrey GR, Kuethe JT (2006) Chem Rev 106:2875. doi:10.1021/cr0505270 and references cited therein

    Article  CAS  Google Scholar 

  2. Knolker HJ, Reddy KR (2002) Chem Rev 102:4303. doi:10.1021/cr020059j and references cited therein

    Article  Google Scholar 

  3. Lescot E, Muzard G, Markovits J, Belleney J, Roques BP, Le Pecq JB (1986) J Med Chem 29:1731. doi:10.1021/jm00159a028 and references cited therein

    Article  CAS  Google Scholar 

  4. Sridharan M, Rajendra Prasad KJ (2007) J Chem Res 3:164

    Article  Google Scholar 

  5. Sridharan M, Rajendra Prasad KJ, Ngendahimana A, Zeller M (2009) J Chem Crystallogr 39(4):270–278. doi:10.1007/s10870-008-9469-9

    Article  CAS  Google Scholar 

  6. Sowmithran D, Rajendra Prasad KJ (1986) Heterocycles 24:711. doi:10.3987/R-1986-03-0711

    Article  CAS  Google Scholar 

  7. Rajendra Prasad KJ, Vijayalakshmi CS (1994) Indian J Chem 33B:481

    Google Scholar 

  8. SMART for WNT 2000 5.630 (1997–2002) Bruker AXS Inc, Madison (WI), USA. Bruker

  9. SAINT + 6.45 (2003) Bruker AXS Inc, Madison (WI), USA. Bruker

  10. Apex2 v2.1-4 (2007) Bruker AXS Inc, Madison (WI), USA Bruker

  11. SHELXTL 6.14 (2000–2003) Bruker AXS Inc, Madison (WI), USA Bruker

  12. Mercury CSD 2.0 (Build 4) (2007) Copyright Cambridge crystallographic data centre. CCDC

  13. Noma Y, Muramatu T, Nishizawa K, Ohno M, Sakai SI (2002) Organohalogen Compd 56(Dioxin 2002):413

  14. Janiak T (2008) Appl Catal A 335(1):7

    Google Scholar 

  15. Ukisu Y, Miyadera T (2001) Organohalogen Compd 54(Dioxin 2001):119

  16. Ukisu Y, Miyadera T (2006) React Kinet Catal Lett 89(2):341. doi:10.1007/s11144-006-0146-8

    Article  CAS  Google Scholar 

  17. Flippen-Anderson JL, Deschamps JR, Gilardi RD, George C (2001) Cryst Eng 4:131. doi:10.1016/S1463-0184(01)00002-8

    Article  CAS  Google Scholar 

  18. Bürgi H, Blanc E, Schwarzenbach D, Liu S, Lu YJ, Kappes MM, Ibers JA (1992) Angew Chem Int Ed Engl 31(5):640. doi:10.1002/anie.199206401

    Article  Google Scholar 

  19. Kirsop P, Storey JMD, Harrison WTA (2006) Acta Crystallogr C 62:o376. doi:10.1107/S0108270106017707

    Article  Google Scholar 

  20. Ichharam V, Boeyens JCA (2001) Cryst Eng 4(2–3):171. doi:10.1016/S1463-0184(01)00011-9

    Article  CAS  Google Scholar 

  21. Blockhuys F, van de Velde CML, Maes ST, Peten C, Geise HJ, van Alsenoy C, Lenstra ATH (2003) Acta Crystallogr B 59(6):770. doi:10.1107/S0108768103021013

    Article  Google Scholar 

  22. Burchell TJ, Soldatov DV, Enright GD, Ripmeester JA (2007) Cryst Eng Comm 9:922. doi:10.1039/b708695d

    CAS  Google Scholar 

  23. Dabros M, Emery PR, Thalladi VR (2007) Angew Chem Int Ed 46:4132. doi:10.1002/anie.200604830

    Article  CAS  Google Scholar 

  24. Lynch DE, Smith G, Byriel KA, Kennard CHL (2006) J Chem Soc Chem Commun 1992:300–301

    Google Scholar 

  25. Smolka T, Boese R, Sustmann R (1999) Struct Chem 10:429–431

    Article  CAS  Google Scholar 

  26. AakerIy CB, Beatty AM, Helfrich BA (2001) Angew Chem Int Ed 40:3240–3242

    Article  Google Scholar 

  27. Cheung EY, Kitchin SJ, Harris KDM, Imai Y, Tajima N, Kuroda R (2003) J Am Chem Soc 125:14658–14659

    Article  CAS  Google Scholar 

  28. AakerIy CB, Desper J, Urbina JF (2005) Chem Commun 2005:2820–2822

  29. Bhogala BR, Basavoju S, Nangia A (2005) Cryst Growth Des 5:1683–1686

    Article  CAS  Google Scholar 

  30. Friščić T, Trask AV, Jones W, Motherwell WDS Angew Chem Int Ed 45:7546–7550. doi:10.1002/anie.200603235

  31. Bürgi H, Capelli SC (2003) Helv Chim Acta 86((5):625. doi:10.1002/hlca.200390138

    Google Scholar 

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Acknowledgments

We would like to acknowledge UGC, New Delhi, India, for the award of Major Research Project Grant No. F. No. 31-122/2005. M. S. thanks UGC, New Delhi for the award of a research fellowship. The diffractometer was funded by NSF grant 0087210, by Ohio Board of Regents grant CAP-491, and by YSU.

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Correspondence to Matthias Zeller.

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Sridharan, M., Rajendra Prasad, K.J., Kotheimer, A.E. et al. Whole Molecule Disorder in a Solid Solution of Two Indoloacridines. J Chem Crystallogr 39, 804–811 (2009). https://doi.org/10.1007/s10870-009-9562-8

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