Field trials were conducted in 2017 and 2018 at the Teaching and Research Farms of Obafemi Awolowo University (OAU), Ile-Ife (7°31′N, 4°31′E, 256 m asl, and 1000–1250 mm annual rainfall) and Michael Okpara University of Agriculture, Umudike (05º29′N, 07º33′E; 122 m asl, and 2177 mm annual rainfall) in Nigeria. Elite open-pollinated maize varieties (14) derived from late-maturing maize germplasm sources were drawn from the drought-tolerant and pro-vitamin A breeding populations of the International Institute of Tropical Agriculture (IITA), Ibadan, Nigeria (Table 1). All possible crosses were made in a diallel fashion without reciprocal among the 14 varieties to produce 91 population hybrids during the growing season of 2017. All possible 91 crosses were made in both directions using bulked pollen of each parent population. Seeds from each cross and its reciprocal were bulked to represent a particular varietal hybrid (Table 1). The parental varieties, the hybrids, and three check cultivars were evaluated for their grain yield performance in six environments under both optimal and sub-optimal growing conditions in 2018 (Table 2). The group of checks comprised two improved OPVs obtained from IITA and a local variety commonly grown by rural farmers in the test locations. The growing conditions, which formed six environments, were based on the total amount of rainfall and the time of planting. Under the optimal growing conditions, the trials were established during the main planting season of maize with optimum amount of rainfall. Under the marginal conditions, the trials were planted at the onset of rainfall when the frequency of rain is erratic and soil moisture is sub-optimal for maize cultivation and towards the end of the rainy season, when flowering is targeted to coincide with drought spell. The environments were thus diverse with respect to the growing conditions and water availability, while drought stress experienced by the genotypes during the flowering stage in the marginal growing condition (late planting) also contributed to the differences between the locations. The general strategy of the conducted trial series was thus to replace testing in multiple year-by location combinations by testing in a number of extreme environments that were representative for agro-ecological conditions that might otherwise only been observed over a longer time period. The National Root Crops Research Institute agrometeorological unit (https://nrcri.gov.ng/index.php/agro-meteorology/) provided meteorological data for the location Umudike, whereas that of the Ile-Ife location was provided by the Micrometeorology Unit, Physics Department, OAU, being the closest weather stations to the experimental sites. The experiment was laid as a randomized incomplete block design (9 × 12 alpha lattice) with three replications in each environment. Experimental units consisted of two-row plots, each 5 m in length with a spacing of 0.75 m. The distance between two adjacent plants within a row was 0.50 m in all trials. Three seeds were planted, and the seedlings later thinned to two per hill approximately 2 weeks after emergence to achieve a final plant population density of about 53,333 plants ha−1. The number of ears per plant (EPP) was estimated as the ratio of the number of harvested ears per plot to the number of harvested plants per plot. Grain yield was computed from the ear weight and converted to kg ha−1. A shelling percentage of 80% was assumed for all cultivars and the grain yield was adjusted to 15% moisture using the following formula:
$$\upgamma = \varepsilon \times \frac{{\left( {100 - n} \right)}}{85} \times \frac{{\left( {10000} \right)}}{\varphi } \times 0.80$$
where γ = grain yield (kg ha−1), ϵ = ear weight (kg m−2), n = moisture at harvest, φ = plot area (m2).
Table 1 Characteristics of the three check varieties as well as the 14 parents used for the diallel crosses that were tested in the rainforest agro-ecology of Nigeria in 2018 Table 2 Characteristics of the test environments used for the evaluation of the genotypes in 2018 Statistical analysis of the individual trials
The phenotypic data of each individual environment were analysed by a linear mixed model of the form:
$${\text{y}}_{\text{jkl}} = {{\upmu }} + {{\upalpha }} \cdot {\text{x}}_{\text{jkl}} + {\text{g}}_{\text{j}} + {\text{r}}_{\text{k}} + {\text{b}}_{\text{kl}} + {\text{e}}_{\text{jkl}}$$
(1)
where \({\text{y}}_{\text{jkl}}\) are the phenotypic observations of grain yield, \({{\upmu }}\) is the grand mean, \({\text{r}}_{\text{k}}\) the fixed effect of the kth replicate, \({\text{b}}_{\text{kl}}\) the random effect of the lth block nested within the kth replicate, and \({\text{e}}_{\text{jkl}}\) the residual effect. The effect \({\text{g}}_{\text{j}}\) of the jth genotype was firstly modelled as random to estimate the genotypic variance \({{\upsigma }}_{\text{g}}^{2}\) and subsequently fixed to derive Best Linear Unbiased Estimates (BLUEs). When considered as fixed, the genotypic effect was further partitioned into parent, hybrid, check and their orthogonal contrasts in order to explain the proportion and significance of variation of each components of the genotype. The number of ears per plant \({\text{x}}_{\text{jkl}}\) and the corresponding regression coefficient \({{\upalpha }}\) served as a covariate in order to compensate for an unequal plant stand between plots. Broad-sense heritability of an individual environment, henceforth denoted as repeatability, was calculated with the following formula (Piepho and Mohring 2007):
$${\text{h}}^{2} = \frac{{{{\upsigma }}_{\text{g}}^{2} }}{{{{\upsigma }}_{\text{g}}^{2} + \frac{{{{\upsigma }}_{\text{e}}^{2} }}{\text{r}}}}$$
(2)
where \({{\upsigma }}_{\text{e}}^{2}\) is the residual variance and r is the number of replications.
Two-stage analysis across trials
Following a two-stage analysis, the BLUEs of the individual environments were subsequently used for an across environment analysis with the linear mixed model:
$${\text{y}}_{\text{ij}} = {{\mu }} + {\text{u}}_{\text{i}} + {\text{g}}_{\text{j}} + {\text{e}}_{\text{ij}}$$
(3)
where \({\text{y}}_{\text{ij}}\) are the BLUEs of grain yield derived from the analysis of the individual environments, \({{\mu }}\) the grand mean, and \({\text{g}}_{\text{j}}\) the effect of the jth genotype that was modelled as fixed to derive BLUEs and subsequently as random to estimate variance components. The fixed effect \({\text{u}}_{\text{i}}\) designated the ith environment and the residual effect \({\text{e}}_{\text{ij}}\) that was in this case confounded with the genotype-by-environment interaction effect followed a normal distribution with \({\mathbf{e}} \sim {\text{N}}\left( {0, {{\upsigma }}_{\text{e}}^{2} } \right)\). The genotypes were subsequently divided into three genotypic groups comprising the parents, hybrids and checks for assessing the stability variance. The statistical model for the analysis can be described with the following mixed model (Mühleisen et al., 2014b):
$${\text{y}}_{\text{hij}} = {{\mu }} + {\text{q}}_{\text{h}} + {\text{u}}_{\text{i}} + {\text{g}}_{\text{hj}} + {\text{qu}}_{\text{hi}} + {\text{f}}_{\text{hij}}$$
(4)
where \({{\mu }}\) is the grand mean, \({\text{q}}_{\text{h}}\) is the fixed effect of the hth group, and \({\text{g}}_{\text{hj}}\) the fixed effect of jth genotype within the hth group. The effect \({\text{qu}}_{\text{hi}}\) of the group-by-environment interaction as well as the group-by-genotype-by-environment interaction \({\text{f}}_{\text{hij}}\) were modelled as random. Group specific estimates of the stability variance were obtained modelling heterogeneous genotype-by-environment interaction variances for each group following the suggestion by Mühleisen et al. (2014b) with a variance–covariance matrix of the form:
$$\left( {\begin{array}{*{20}c} {{{\upsigma }}_{{{\text{f}}_{{{\text{g}}\left( 1 \right)}} }}^{2} } & 0 & 0 \\ 0 & {{{\upsigma }}_{{{\text{f}}_{{{\text{g}}\left( 2 \right)}} }}^{2} } & 0 \\ 0 & 0 & {{{\upsigma }}_{{{\text{f}}_{{{\text{g}}\left( 3 \right)}} }}^{2} } \\ \end{array} } \right)$$
(5)
where \({{\upsigma }}_{{{\text{f}}_{{{\text{g}}\left( 1 \right)}} }}^{2}\), \({{\upsigma }}_{{{\text{f}}_{{{\text{g}}\left( 2 \right)}} }}^{2}\), and \({{\upsigma }}_{{{\text{f}}_{{{\text{g}}\left( 3 \right)}} }}^{2}\) designate the residual variance, henceforth called the stability variance, of the three groups with \({\mathbf{f}}_{{\mathbf{h}}} \sim {\text{N}}\left( {0, {{\upsigma }}_{{{\text{f}}_{{{\text{g}}\left( {\text{h}} \right)}} }}^{2} } \right)\). The stability variance of a group was thus defined as its genotype-by-environment interaction analogues to the stability variance of individual genotypes described by Shukla (1972).
One-stage analysis across trials
The two-stage analysis was subsequently compared with a one-stage analysis that was conducted by employing a mixed model of the form:
$${\text{y}}_{\text{ijkl}} = {{\mu }} + {{\upalpha }}_{\text{i}} \cdot {\text{x}}_{\text{ijkl}} + {\text{u}}_{\text{i}} + {\text{g}}_{\text{j}} + {\text{gu}}_{\text{ij}} + {\text{r}}_{\text{ik}} + {\text{b}}_{\text{ikl}} + {\text{e}}_{\text{ijkl}}$$
(6)
where \({\text{y}}_{\text{ijkl}}\) are the phenotypic observations of grain yield, \({{\mu }}\) the grand mean, and \({\text{g}}_{\text{j}}\) the effect of the jth genotype that was modelled as fixed to derive BLUEs and subsequently as random to estimate variance components as beforehand. The fixed effect \({\text{u}}_{\text{i}}\) designated the ith environment and \({\text{gu}}_{\text{ij}}\) the random genotype-by-environment interaction effect. The number of ears per plant \({\text{x}}_{\text{ijkl}}\) served again as a covariate, though this time with an environment specific regression coefficient \({{\upalpha }}_{\text{i}}\). The effects \({\text{r}}_{\text{ik}}\) and \({\text{b}}_{\text{ikl}}\) designated again the replicate and block effect, while the residual effect \({\text{e}}_{\text{ijkl}}\) followed a normal distribution with \({\mathbf{e}} \sim {\text{N}}\left( {0, {{\upsigma }}_{\text{e}}^{2} } \right)\). The stability variance was likewise assessed by dividing the genotypes into three groups of parents, hybrids, and checks. The statistical model for the analysis can be described with the following mixed model (Mühleisen et al. 2014a):
$${\text{y}}_{\text{hijkl}} = {{\mu }} + {{\upalpha }}_{\text{i}} \cdot {\text{x}}_{\text{hijkl}} + {\text{q}}_{\text{h}} + {\text{u}}_{\text{i}} + {\text{g}}_{\text{hj}} + {\text{qu}}_{\text{hi}} + {\text{f}}_{\text{hij}} + {\text{r}}_{\text{ik}} + {\text{b}}_{\text{ikl}} + {\text{e}}_{\text{hijkl}}$$
(7)
where the designation of all previous described effect was retained, while the additional effects \({\text{qu}}_{\text{hi}}\) of the group-by-environment interaction as well as the group-by-genotype-by-environment interaction \({\text{f}}_{\text{hij}}\) were modelled random. Group specific estimates of the stability variance were again obtained modelling heterogeneous genotype-by-environment interaction that were in the case of the one-stage analysis not confounded with the residual variance.
Computation of the panmictic mid-parent and commercial heterosis
Heterosis was finally computed with BLUEs derived from the single-step model [6] by:
$${\text{Het}}_{\text{MP}} = 100 \cdot \left( {{\hat{\text{H}}} - \overline{\text{MP}} } \right)/\overline{\text{MP}}$$
([8])
and
$${\text{Het}}_{\text{C}} = 100 \cdot \left( {{\hat{\text{H}}} - \hbox{max} \left[ {{\hat{\text{C}}}} \right]} \right)/\hbox{max} \left[ {{\hat{\text{C}}}} \right]$$
([9])
where the panmictic mid-parent heterosis was expressed as the relative difference between the estimated hybrid performance \({\hat{\text{H}}}\) and the mid-parent value \(\overline{\text{MP}}\), whereas the commercial heterosis \({\text{Het}}_{\text{C}}\) was computed as the difference between the hybrid performance and the estimated performance of the best check variety \(\hbox{max} \left[ {{\hat{\text{C}}}} \right]\). Statistical analyses were performed using the statistical package sommer for the R programming environment (R Development Core Team 2016). A combined ANOVA across the six test environments was performed using SAS PROC GLM (SAS Institute 2012). The variation due to the genotype was further partitioned into components due to the parents, hybrids, checks and their interactions. Lastly, a GGE biplot analysis of the selected genotypes was conducted using the GGEBiplots (Frutos et al. 2014) package for R.