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Controls on dissolved organic carbon composition and export from rice-dominated systems

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Abstract

Rice field outflow can contain high concentrations of dissolved organic carbon (DOC), which plays a crucial role in drinking water quality and aquatic ecosystem processes. This study examined the relationship between potential determining factors (i.e. rice area, outflow, drainwater reuse, soil properties, and time, measured as the day in the growing season) and the concentration and composition of DOC exported from 11 rice-dominated subwatersheds. Samples were collected from subwatershed inflow and outflow every 1–2 weeks from May through September 2008 and analyzed for DOC concentration, trihalomethane formation potential (THMFP), and also specific ultraviolet absorbance (SUVA254) and the spectral slope parameter (S), which are indicators of DOC composition. Concentrations of DOC across all subwatersheds and sampling dates ranged from 1.56 to 14.43 mg L−1 (mean = 4.32 mg L−1). Linear mixed effects (LME) analysis indicated that DOC concentration decreased over time, and that THMFP, and DOC and THM flux, decreased over time, but increased with outflow. LME analysis of the SUVA254 and S parameters indicated that the fraction of aromatic DOC moieties increased with time, outflow, and reuse. Additionally, apparent peaks in DOC concentrations, THMFP, and SUVA254 coincided with the onsets of flooding and draining. Lastly, subwatersheds with outflow less than approximately 4,700 m3 ha−1 behaved as sinks of DOC. Our findings suggest that water management factors such as outflow, reuse, and discrete irrigation events, all of which vary over the course of the growing season, were the dominant determinants of DOC concentration and composition.

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References

  • Ahearn DS, Sheibly RW, Dahlgren RA, Anderson M, Johnson J, Tate KW (2005) Land use and land cover influence on water quality in the last free-flowing river draining the western Sierra Nevada, California. J Hydrol 313:234–247. doi:10.1016/j.jhydrol.2005.02.038

    Article  Google Scholar 

  • Aitkenhead-Peterson JA, McDowell WH, Neff JC (2003) Sources, production, and regulation of allochthonous dissolved organic matter inputs to surface waters. In: Findlay SEG, Sinsabaugh RL (eds) Aquatic ecosystems: interactivity of dissolved organic matter. Elsevier, New York, pp 25–70

    Google Scholar 

  • Belzile C, Roesler CS, Christensen JP, Shakhova N, Semiletov I (2006) Fluorescence measured using the WETStar DOM fluorometer as a proxy for dissolved matter absorption. Estuar Coast Shelf Sci 67:441–449. doi:10.1016/j.ecss.2005.11.032

    Article  Google Scholar 

  • Benner R (2003) Molecular indicators of the bioavailability of dissolved organic matter. In: Findlay SEG, Sinsabaugh RL (eds) Aquatic ecosystems: interactivity of dissolved organic matter. Elsevier, New York, pp 121–137

    Google Scholar 

  • Bertilsson S, Jones JB (2003) Supply of dissolved organic matter to aquatic ecosystems: autocthonous sources. In: Findlay SEG, Sinsabaugh RL (eds) Aquatic ecosystems: interactivity of dissolved organic matter. Elsevier, New York, pp 3–24

    Google Scholar 

  • Blough NV, Del Vecchio R (2002) Chromophoric DOM in the coastal environment. In: Hansell DA, Carlson CA (eds) Biogeochemistry of marine dissolved organic matter. Academic Press, San Francisco, pp 509–546

    Chapter  Google Scholar 

  • Booth G, Raymond P, Neung-Hwan O (2007) LoadRunner software and website. Yale University, New Haven. http://www.environment.yale.edu/raymond/loadrunner/. Accessed 28 Mar 2010

  • Bouman BAM, Humphreys E, Tuong TP, Barker R (2007) Rice and water. Adv Agron 92:187–237. doi:10.1016/s0065-2113(04)92004-4

    Article  Google Scholar 

  • Boyer EW, Hornberger GM, Bencala KE, McKnight DM (1997) Response characteristics of DOC flushing in an alpine catchment. Hydrol Process 11:1635–1647

    Article  Google Scholar 

  • CALFED (2007) CALFED 2007 annual report. CALFED Bay-Delta Program. http://www.calwater.ca.gov/calfed/newsroom/Annual_Reports.html. Accessed 29 Sept 2010

  • CDFA (California Department of Food and Agriculture) (2009) California agricultural production statistics 2008–2009. California Department of Food and Agriculture, Sacramento. http://www.cdfa.ca.gov/statistics/. Accessed 29 Sept 2010

  • CH2MHILL (2003) GCID drainwater operations study: a CALFED water use efficiency program study. Glenn-Colusa Irrigation District, Willows

    Google Scholar 

  • Chow AT, Gao S, Dahlgren RA (2005) Physical and chemical fractionation of dissolved organic matter and trihalomethane precursors: a review. J Water Supply 54:475–507

    Google Scholar 

  • Chow AT, Dahlgren RA, Harrison JA (2007) Watershed sources of disinfection byproduct precursors in the Sacramento and San Joaquin rivers, California. Environ Sci Technol 41:7645–7652. doi:10.1021/es070621t

    Article  Google Scholar 

  • Chow AT, Dahlgren RA, Zhang Q, Wong PK (2008) Relationships between specific ultraviolet absorbance and trihalomethane precursors of different carbon sources. J Water Supply Res Technol Aqua 57:471–480. doi:10.2166/aqua.2008.064

    Article  Google Scholar 

  • Chow AT, Lee ST, O’Geen AT, Orozco T, Beaudette D, Wong PK, Hernes PJ, Tate KW, Dahlgren RA (2009) Litter contributions to dissolved organic matter and disinfection byproduct precursors in California oak woodland watersheds. J Environ Qual 38:2334–2343. doi:10.2134/jeq2008.0394

    Article  Google Scholar 

  • Cleveland CC, Neff JC, Townsend AR, Hood E (2004) Composition, dynamics, and fate of leached dissolved organic matter in terrestrial ecosystems: results from a decomposition experiment. Ecosystems 7:275–285. doi:10.1007/s10021-003-0236-7

    Article  Google Scholar 

  • Coe MT, Costa MH, Soares-Filhoc BS (2009) The influence of historical and potential future deforestation on the stream flow of the Amazon River—land surface processes and atmospheric feedbacks. J Hydrol 369:165–174. doi:10.1016/j.jhydrol.2009.02.043

    Article  Google Scholar 

  • Costa MH, Botta A, Cardille JA (2003) Effects of large-scale changes in land cover on the discharge of the Tocantins River, Southeastern Amazonia. J Hydrol 283:206–217. doi:10.1016/s0022-1694(03)00267-1

    Article  Google Scholar 

  • Crepeau KL, Fram MS, Bush N (2004) Method analysis by the US Geological Survey California District Sacramento Laboratory: determination of trihalomethane formation potential, method validation, and quality control practices. US Geological Survey Scientific Investigations Report No 2004-5003. US Geological Survey, Denver

  • Dalzell BJ, Filley TR, Harbor JM (2005) Flood pulse influences on terrestrial organic matter export from an agricultural watershed. J Geophys Res 110:G02011. doi:10.1029/2005JG000043

    Article  Google Scholar 

  • Dalzell BJ, Filley TR, Harbor JM (2007) The role of hydrology in annual organic carbon loads and terrestrial organic matter export from a midwestern agricultural watershed. Geochim Cosmochim Acta 71:1448–1462. doi:10.1016/j.gca.2006.12.009

    Article  Google Scholar 

  • Department of Water Resources (2008) Colusa Basin Drain. Planning and local assistance Northern District. http://www.nd.water.ca.gov/PPAs/WaterQuality/RiversStreams/SacramentoRiver/CBD/. Accessed 29 Sept 2010

  • Dodds L, King WD (2001) Relation between trihalomethane compounds and birth defects. Occup Environ Med 58:443–446

    Article  Google Scholar 

  • ESRI (2002) ArcGIS: release 8.3 software. Environmental Systems Research Institute, Redlands

    Google Scholar 

  • FAO (2004) Rice and human nutrition fact sheet. Food and Agriculture Organization of the United Nations. http://www.fao.org/rice2004/en/f-sheet/factsheet3.pdf. Accessed 29 Sept 2010

  • FAOSTAT (2009) FAO statistical databases. Food and Agriculture Organization of the United Nations. http://www.faostat.fao.org/site/339/default.aspx. Accessed 29 Sept 2010

  • Faulkner SP, Richardson CJ (1989) Physical and chemical characteristics of freshwater wetland soils. In: Hammer DA (ed) Constructed wetlands for wastewater treatment: municipal industrial and agricultural. Lewis Publishers, Chelsea, pp 41–72

    Google Scholar 

  • Fellman JB, Hood E, Edwards RT, D’Amore DV (2009) Changes in the concentration, biodegradability and fluorescent properties of dissolved organic matter during stormflows in coastal temperate watersheds. J Geophys Res 114:G01021. doi:10.1029/2008JG000790

    Article  Google Scholar 

  • Foley JA, DeFries R, Asner GP et al (2005) Global consequences of land use. Science 309:570–574. doi:10.1126/science.1111772

    Article  Google Scholar 

  • Fujii R, Ranalli AJ, Aiken GR, Bergamaschi BA (1998) Dissolved organic carbon concentrations and compositions, and trihalomethane formation potentials in waters from agricultural peat soils, Sacramento-San Joaquin Delta, California: implications for drinking water quality. Water Resources Investigations Report 98-4147. US Geological Survey, Reston

  • GCID (2009) Glenn-Colusa Irrigation District report on water measurement program for 2008, 47th edn. Glenn-Colusa Irrigation District, Willows

  • Gleick PH (2003) Water use. Annu Rev Environ Resour 28:275–314. doi:10.1146/annurev.energy.28.040202.122849

    Article  Google Scholar 

  • Glenn County (1993) Glenn County general plan volume III: environmental settings technical paper. Glenn County. http://www.gcplanupdate.net/general_plan/default.asp. Accessed 29 Sept 2010

  • Gu BH, Schmitt J, Chen Z, Liang LY, McCarthy JF (1995) Adsorption and desorption of different organic-matter fractions on iron-oxide. Geochim Cosmochim Acta 59:219–229

    Article  Google Scholar 

  • Hafeez MM, Bouman BAM, Van de Giesen N, Vlek P (2007) Scale effects on water use and water productivity in a rice-based irrigation system (UPRIIS) in the Philippines. Agric Water Manag 92:81–89. doi:10.1016/j.agwat.2007.05.006

    Article  Google Scholar 

  • Helms JR, Stubbins A, Ritchie JD, Minor EC, Kieber DJ, Mopper K (2008) Absorption spectral slopes and slope ratios as indicators of molecular weight, source, and photobleaching of chromophoric dissolved organic matter. Limnol Oceanogr 53:955–969

    Article  Google Scholar 

  • Hernes PJ, Spencer RGM, Dyda RY, Pellerin BA, Bachand PAM, Bergamaschi BA (2008) The role of hydrologic regimes on dissolved organic carbon composition in an agricultural watershed. Geochim Cosmochim Acta 72:5266–5277. doi:10.1016/j.gca.2008.07.031

    Article  Google Scholar 

  • Hill JE, Scardaci SC, Roberts SR, Tiedeman J, Williams JF (1991) Rice irrigation systems for tailwater management. University of California division of Agriculture and Natural Resources, Publication No. 21490

  • Hill JE, Williams JF, Mutters RG, Greer CA (2006) The California rice cropping system: agronomic and natural resource issues for long-term sustainability. Paddy Water Environ 4:13–19

    Article  Google Scholar 

  • Hood E, Gooseff MN, Johnson SL (2006) Changes in the character of stream water dissolved organic carbon during flushing in three small watersheds, Oregon. J Geophys Res 111:G01007. doi:10.1029/2005JG000082

    Article  Google Scholar 

  • Hornberger GM, Bencala KE, McKnight DM (1994) Hydrological controls on dissolved organic carbon during snowmelt in the Snake River near Montezuma, Colorado. Biogeochemistry 25:147–165

    Article  Google Scholar 

  • Jardine PM, Wilson GV, McCarthy JF, Luxmoore RJ, Taylor DL, Zelazny LW (1990) Hydrogeochemical processes controlling the transport of dissolved organic carbon through a forested hillslope. J Contam Hydrol 6:3–20

    Article  Google Scholar 

  • Kalbitz K, Solinger S, Park JH, Michalzik B, Matzner E (2000) Controls on the dynamics of dissolved organic matter in soils: a review. Soil Sci 165:277–304

    Article  Google Scholar 

  • Kalbitz K, Schmerwitz J, Schwesig D, Matzner E (2003a) Biodegradation of soil-derived dissolved organic matter as related to its properties. Geoderma 113:273–291. doi:10.1016/S0016-7061(02)00365-8

    Article  Google Scholar 

  • Kalbitz K, Schwesig D, Schmerwitz J, Kaiser K, Haumaier L, Glaser B, Ellerbrock R, Leinweber P (2003b) Changes in properties of soil-derived dissolved organic matter induced by biodegradation. Soil Biol Biochem 35:1129–1142. doi:10.1016/S0038-0717(03)00165-2

    Article  Google Scholar 

  • Kogel-Knabner I, Amelung W, Cao ZH, Fiedler S, Frenzel P, Jahn R, Kalbitz K, Kolbl A, Schloter M (2010) Biogeochemistry of paddy soils. Geoderma 157:1–14. doi:10.1016/j.geoderma.2010.03.009

    Article  Google Scholar 

  • Korshin GV, Li CW, Benjamin MM (1997) Monitoring the properties of natural organic matter through UV spectroscopy: a consistent theory. Water Res 31:1787–1795

    Article  Google Scholar 

  • Kraus TEC, Bergamaschi BA, Hernes PJ, Stepanauskas R, Kendall C, Losee RF, Fuji R (2008) Assessing the contribution of wetlands and subsided islands to dissolved organic matter and disinfection byproduct precursors in the Sacramento–San Joaquin River Delta: a geochemical approach. Org Geochem 39:1302–1318. doi:10.1016/j.orggeochem.2008.05.012

    Article  Google Scholar 

  • Lundquist EJ, Jackson LE, Scow KM (1999) Wet-dry cycles affect dissolved organic carbon in two California agricultural soils. Soil Biol Biochem 31:1031–1038

    Article  Google Scholar 

  • Marschner B, Kalbitz K (2003) Controls of bioavailability and biodegradability of dissolved organic matter in soils. Geoderma 113:211–235. doi:10.1016/S0016-7061(02)00362-2

    Article  Google Scholar 

  • McDowell WH, Likens GE (1988) Origin, composition, and flux of dissolved organic carbon in the Hubbard Brook valley. Ecol Monogr 58:177–195

    Article  Google Scholar 

  • McKnight DM, Bencala KE, Zellweger GW, Alken GR, Feder GL, Thorn KA (1992) Sorption of dissolved organic carbon by hydrous aluminum and iron oxides occurring at the confluence of Deer Creek with the Snake River, Summit County, Colorado. Environ Sci Technol 26:1388–1396

    Article  Google Scholar 

  • Meier M, Chin Y, Maurice P (2004) Variations in the composition and adsorption behavior of dissolved organic matter at a small, forested watershed. Biogeochemistry 67:39–56

    Article  Google Scholar 

  • Moore TR (1989) Dynamics of dissolved organic-carbon in forested and disturbed catchments, Westland, New Zealand 1. Maimai. Water Resour Res 25:1321–1330

    Article  Google Scholar 

  • Moore TR, Jackson RJ (1989) Dynamics of dissolved organic-carbon in forested and disturbed catchments, Westland, New Zealand 2. Larry River. Water Resour Res 25:1331–1339

    Article  Google Scholar 

  • Mulholland PJ (2003) Large-scale patterns in dissolved organic carbon concentration, flux, and sources. In: Findlay SEG, Sinsabaugh RL (eds) Aquatic ecosystems: interactivity of dissolved organic matter. Elsevier, New York, pp 139–159

    Google Scholar 

  • Natural Resources Conservation Service (2009) National soil survey handbook, title 430-VI. United States Department of Agriculture. http://www.soils.usda.gov/technical/handbook/. Accessed 20 Aug 2009

  • Nelson PN, Baldock JA, Oades JM (1993) Concentration and composition of dissolved organic-carbon in streams in relation to catchment soil properties. Biogeochemistry 19:27–50. doi:10.1007/BF00000573

    Article  Google Scholar 

  • Nieuwenhuijsen MJ, Toledano MB, Eaton NE, Fawell J, Elliott P (2000) Chlorination disinfection byproducts in water and their association with adverse reproductive outcomes: a review. Occup Environ Med 57:73–85

    Article  Google Scholar 

  • Pinheiro JC, Bates DM (2000) Mixed-effects models in S and S-PLUS. Springer, New York

    Book  Google Scholar 

  • R Development Core Team (2009) R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna. http://www.R-project.org. Accessed 20 Aug 2009

  • Raymond PA, Saiers JE (2010) Event controlled DOC export from forested watersheds. Biogeochemistry 100:197–209

    Article  Google Scholar 

  • Reckhow DA, Singer PC, Malcolm RL (1990) Chlorination of humic materials: byproduct formation and chemical interpretation. Environ Sci Technol 24:1655–1664

    Article  Google Scholar 

  • Rook JJ (1976) Haloforms in drinking water. J Am Water Works Assoc 68:168–172

    Google Scholar 

  • Rook JJ (1977) Chlorination reactions of fulvic acids in natural waters. Environ Sci Technol 11:478–482

    Article  Google Scholar 

  • Ruark MD, Linquist BA, Six J et al (2010) Seasonal losses of dissolved organic carbon and total dissolved solids from rice production systems in northern California. J Environ Qual 39:304–313. doi:10.2134/jeq2009.0066

    Article  Google Scholar 

  • Runkel RL, Crawford CG, Cohn TA (2004) Load Estimator (LOADEST): a FORTRAN program for estimating constituent loads in streams and rivers. US Geological Survey, Denver. http://www.pubs.usgs.gov/tm/2005/tm4A5/. Accessed 29 Sept 2010. US Geological Survey techniques and methods book 4, chapter A5

  • Sanderman J, Lohse KA, Baldock JA, Amundson R (2009) Linking soils and streams: sources and chemistry of dissolved organic matter in a small coastal watershed. Water Resour Res 45:W03418. doi:10.1029/2008wr006977

    Article  Google Scholar 

  • Saraceno JF, Pellerin BA, Downing BD, Boss E, Bachand PAM, Bergamaschi BA (2009) High-frequency in situ optical measurements during a storm event: assessing relationships between dissolved organic matter, sediment concentrations, and hydrologic processes. J Geophys Res 114:G00F09. doi:10.1029/2009jg000989

  • Soil Survey Staff (2009) Soil Survey Geographic (SSURGO) Database for Glenn and Colusa counties, California. Natural Resources Conservation Service, United States Department of Agriculture. http://www.soildatamart.nrcs.usda.gov. Accessed 20 Aug 2009

  • Spencer RGM, Baker A, Ahad JME et al (2007a) Discriminatory classification of natural and anthropogenic waters in two UK estuaries. Sci Total Environ 373:305–323. doi:10.1016/j.scitotenv.2006.10.052

    Article  Google Scholar 

  • Spencer RGM, Pellerin BA, Bergamaschi BA, Downing BD, Kraus TEC, Smart DR, Dahgren RA, Hernes PJ (2007b) Diurnal variability in riverine dissolved organic matter composition determined by in situ optical measurement in the San Joaquin River (California, USA). Hydrol Process 21:3181–3189. doi:10.1002/hyp.6887

    Article  Google Scholar 

  • Spencer RGM, Aiken GR, Butler KD, Dornblaser MM, Striegl RG, Hernes PJ (2009) Utilizing chromophoric dissolved organic matter measurements to derive export and reactivity of dissolved organic carbon exported to the Arctic Ocean: a case study of the Yukon River, Alaska. Geophys Res Lett 36:L06401. doi:10.1029/2008gl036831

    Article  Google Scholar 

  • Spencer RGM, Hernes PJ, Ruf R, Baker A, Dyda RY, Stubbins A, Six J (2010) Temporal controls on dissolved organic matter and lignin biogeochemistry in a pristine tropical river, Democratic Republic of Congo. J Geophys Res 115:G03013. doi:10.1029/2009jg001180

    Article  Google Scholar 

  • S-PLUS (2001) S-PLUS 6.0 professional release 2. Copyright 1988–2001. Insightful Corporation, Seattle

    Google Scholar 

  • Stedmon CA, Markager S, Kaas H (2000) Optical properties and signatures of chromophoric dissolved organic matter (CDOM) in Danish coastal waters. Estuar Coast Shelf Sci 51:267–278

    Article  Google Scholar 

  • Tate KW, Atwill ER, McDougald NK, George MR (2003) Spatial and temporal patterns of cattle feces deposition on rangeland. J Range Manag 56:432–438

    Article  Google Scholar 

  • Tipping E, Woof C, Rigg E, Harrison AF, Ineson P, Taylor K, Benham D, Poskitt J, Rowland AP, Bol R, Harkness DD (1999) Climatic influences on the leaching of dissolved organic matter from upland UK moorland soils, investigated by a field manipulation experiment. Environ Int 25:83–95

    Article  Google Scholar 

  • Weishaar JL, Aiken GR, Bergamaschi BA, Fram MS, Fujii R, Mopper K (2003) Evaluation of specific ultraviolet absorbance as an indicator of the chemical composition and reactivity of dissolved organic carbon. Environ Sci Technol 37:4702–4708. doi:10.1021/es030360x

    Article  Google Scholar 

  • Wilson HF, Xenopolous MA (2009) Effects of agricultural land use on the composition of fluvial dissolved organic carbon. Nat Geosci 2:37–41

    Article  Google Scholar 

  • Zulu G, Toyota M, Misawa S (1996) Characteristics of water reuse and its effects on paddy irrigation system water balance and the riceland ecosystem. Agric Water Manag 31:269–283

    Article  Google Scholar 

  • Zuur AF, Ieno EN, Walker NJ, Saveliev AA, Smith GM (2009) Mixed effects models and extensions in ecology with R. Springer, New York

    Book  Google Scholar 

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Acknowledgments

We gratefully acknowledge the Glenn-Colusa Irrigation District for providing land use, irrigation, and water management data. We thank the U.S. Fish and Wildlife Service for providing water management information on the Sacramento National Wildlife Refuge. We also thank Dylan Beaudette for his help in compiling and analyzing the SSURGO data. We are grateful to Katie Chun and Cesar Abrenilla for their assistance with sample processing, analysis, and database management. Lastly, we thank the University of California Davis, Department of Plant Sciences for the support provided by the Graduate Student Researcher award.

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Correspondence to Monika Krupa.

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10533_2011_9610_MOESM1_ESM.pdf

Online Resource 1 Graphs of observed inflow and outflow dissolved organic carbon (DOC) flux per irrigated area versus inflow and outflow DOC flux per irrigated area predicted by the LoadRunner Maximum Likelihood Estimation model for all 11 subwatersheds across the 15 sample events (PDF 65 kb)

10533_2011_9610_MOESM2_ESM.pdf

Online Resource 2 Flow, internal reuse, and dissolved organic carbon (DOC) flux and concentration, trihalomethane formation potential (THMFP), specific ultraviolet absorbance at 254 nm (SUVA254), and spectral slope (S 275–295 and S 290–350) data obtained over the course of the growing season for all 11 subwatersheds (PDF 143 kb)

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Krupa, M., Spencer, R.G.M., Tate, K.W. et al. Controls on dissolved organic carbon composition and export from rice-dominated systems. Biogeochemistry 108, 447–466 (2012). https://doi.org/10.1007/s10533-011-9610-2

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