Abstract
Habitat loss, together with less obvious land-use changes such as intensified farming practice, can have significant adverse impacts on biodiversity. An important factor in determining the ability of species to cope with such changes is their potential to sustain a populations network by dispersal across the landscape. Habitat quality and structure are particularly important for surface-dwelling species with low dispersal abilities, such as amphibians. To assess this ecological function, ponds in a coastal and typically rural area of northern France were surveyed for amphibians in 1974, 1992 and 2011. These repeated surveys yielded different outcomes for different species groups. Three rare species persisted in more or less specialized habitat types. Two moderately common species declined, but kept strongholds in coastal dunes and associated marshes. Five common species with broad ecological niches remained equally widespread. The Northern crested newt declined markedly and the Midwife toad declined dramatically, as did their breeding habitats in vegetated ponds and cattle drinking troughs. One species, the Moor frog, may have gone locally extinct. A model of relative resistance to amphibian dispersal was created for different landscape types, on a scale from 0 (low resistance) to 1 (high resistance). This generated values of 0.23 for pasture, 0.72 for arable and 0.98 for urban and transport. As pasture declined in the study area, while arable and urban/transport infrastructure increased, amphibian dispersal became more difficult. However, dispersal paths proved difficult to evaluate in a patchy landscape like the one surveyed, due to a paucity of spatial signal. Pond loss is a more tractable reason for the observed amphibian species decline than is the quality of intervening terrestrial habitat matrix. In 2011, 22 newly created ponds had species richness in line with pre-existing ponds and this will have counteracted a dwindling metapopulation structure, indicating that habitat creation/restoration can play a valuable role in conservation. The colonization of new ponds may also prove more informative for gauging the potential for amphibian dispersal in the landscape than the preceding decline.
Similar content being viewed by others
Avoid common mistakes on your manuscript.
Introduction
The second half of the twentieth century saw a major revolution in agricultural practice (Blaxter and Robertson 1995). The resulting increase of arable agriculture, over traditionally-managed mixed agriculture and pasture has caused widespread declines in farmland biodiversity (Benton et al. 2003; Tscharntke et al. 2005; Reidsma et al. 2006). Together with parallel increases in urbanization and transport networks, these changes mean that landscapes rich in biodiversity have frequently been destroyed or lost the potential for harbouring wildlife. In particular, landscape modifications most affect those taxa that show a high reliance on specific terrestrial ecosystems and have low dispersal capability, such as amphibians. Moreover, this group of species relies on both aquatic and terrestrial environments, making them especially vulnerable to changes in both types of system (Stoate et al. 2009; Becker et al. 2010; Tryjanowski et al. 2011). As a result, it is widely regarded that habitat loss and alteration, largely due to ongoing changes in agricultural practice and wider land-use, has been the overarching factor causing declining amphibian populations in large parts of the Holarctic (Collins 2010; Heatwole 2013; Houlahan et al. 2000; Cushman 2006; Gardner et al. 2007; Trochet et al. 2014).
Linked to habitat area and quality, the persistence of populations within a landscape is also crucially determined by the ability of an organism to move through the environment (Beier et al. 2008). In metapopulations, the long-term viability of species is dependent on dispersal—which is the successful breeding of an individual in a place other than where it was born. Practical nature conservation has often been focussed on enhancing key breeding sites, but there is increasing awareness of the need for protection and restoration of habitat corridors and other components in the environment that promote dispersal (Sutcliffe et al. 2003; McRae et al. 2012). An animal group in which metapopulation structure may be especially pronounced is the Holarctic amphibians, including frogs, toads, newts and salamanders. Most species produce large numbers of offspring, mostly in stagnant water (i.e., ‘ponds’). After larval development and metamorphosis some of the juveniles will attempt to disperse (Cushman, 2006), a process which can take several years (Semlitsch, 2008). Their dispersal success will depend on both pond availability (i.e. quantity—the distance to travel) and on the characteristics of the intervening landscape (i.e. quality—the difficulty and risk of travel) (Marsh and Trenham 2001; Mazerolle and Desrochers 2005). Models for population connectivity have to consider both factors as well as their interaction but, as yet, few studies have addressed their relative importance (for an amphibian example see Fortuna et al. 2006).
Animal dispersal over the landscape has two components: functional connectivity, which depends on the behaviour of a dispersing organism within the landscape, and structural connectivity, which depends on the landscape spatial scale and configuration (Keitt et al. 1997; Baguette and Van Dyck 2007). In parallel to this, dispersal can be ‘informed’ or ‘naïve’. In the informed mode, decisions are made by an individual of a highly cognitive species (such as a bear, cougar or lion), which has the capability to locally select a route that minimizes the cost for movement (Chetkiewicz and Boyce 2009; Elliot et al. 2014). The alternative naïve mode is frequently applied in the context of metapopulation models, to more-or-less randomly moving individuals that rely on chance to make it through dispersal journeys (Bergerot et al. 2013). A combination of both strategies will probably apply to many organisms, in particular to terrestrial organisms with low dispersal capabilities such as amphibians (Brown et al. 2014; Campbell Grant et al. 2010). They will, on one hand, not be able to oversee longer routes, such as pond to pond dispersals, but may make well-informed decisions on the basis of the local environment they find themselves in. As data on individual paths are rare for amphibians and may refer to migration rather than dispersal, it is not possible to confirm whether dispersal routes are informed or naïve (Mazerolle and Vos 2006; Vos et al. 2007; Sinsch et al. 2012; Sinsch 2014). As a consequence, it is necessary to explore both options (Decout et al. 2012).
Animal dispersal can be regarded as a key determinant of breeding habitat occupancy. This approach recognises that landscapes are made up of habitat patches of varying quality, often with defined locations of high quality or importance (such as amphibian breeding sites) lying within a lower quality matrix. The permeability of this matrix has a critical role in determining community structure and population dynamics through its effects on dispersal and colonization between high quality locations (Donald and Evans 2006). Evidence for this has been found for a range of taxa, including amphibians (Gray et al. 2004). Declines in the quality of the landscape matrix reduce the ability of animals to travel the necessary distances between good habitat patches, increasing the chances of local population extinction. However, active landscape restoration can enhance connectivity and do much to help conserve vulnerable species.
We surveyed the coastal area of the département (dpt.) Pas-de-Calais in northern France for amphibians in three surveys conducted in the last four decades. The particular aims of this were: (i) to document species assemblages and see how these are associated with land use; (ii) to see if and how these configurations have changed over time; (iii) to investigate how connectivity of amphibian populations has changed as a function of the loss of ponds and change in land use, and (iv) to analyse how the creation of new ponds for amphibians may help to counter the fragmentation of populations. The dpt. Pas-de-Calais represents very well the post-war intensification of agriculture and the increase of built infrastructure, yet some areas including the coastal dunes and associated wetlands are largely unaffected and serve as a useful reference. As a result, the taxa chosen and the study area are suitable to illustrate how landscape change can affect habitat occupancy, connectivity and metapopulation structure through its impacts on dispersal.
Materials and methods
The study area covers ca. 300 km2 of the western part of the dpt. Pas-de-Calais (Fig. 1) and falls almost entirely under the ‘Parc Naturel Régional des Caps et Marais d’Opale’. The landscape is dominated by agriculture, with both pasture and arable land present. Along the coast, two large dune areas are found, with associated wetlands, while substantial areas inland are covered by forests and quarries. The study area was divided into 12 geographical sections based upon a past (1963, Fig. 1) and more recent (2003, Appendix I in Supplementary materials) land-cover classification (Curado et al. 2011).
The area was first surveyed for amphibians in the spring and early summer of 1974 (AZ, together with H. Hooghiemstra) and 1975 (JWA, together with A. G. M. Gerats), for a second time in spring 1992 (CA, with assistance of JWA and AZ) and for the third time in spring and early summer 2011 (WRMM and AZ) and in the spring of 2012 (JWA). Potential amphibian breeding sites were located in the field visually, aided by 1:25,000 topographical maps of the ‘Institute Géographique National’ and through contact with local naturalists and employees of the Parc Naturel Régional. Pond coordinates were taken from IGN maps (first survey) or by GPS. Surveys were undertaken during the main amphibian breeding period and were commonly repeated through the season to limit seasonal constraints. We distinguished nine pond types in the field, based upon their origin and levels of aquatic vegetation (e.g., various types of field ponds and cattle drinking troughs; see Appendix II in Supplementary materials).
A typical site visit to each pond included a search for amphibian eggs and embryos, dip netting for larvae and aquatic adults and a search of the terrestrial habitat in the vicinity. Evening and nightly visits were made to find amphibians by torching (mostly adults) and to detect anuran species from their mating call. Species identification was unproblematic except for the eggs, embryos and larvae of the two Lissotriton species (L. helveticus and L. vulgaris). This limitation will have affected the overall results for detecting presence/absence only marginally, since Lissotriton adults are often abundant and unproblematic to observe. Single observations and count data in the field were recoded as presence/absence data for each pond.
We recognized three classes of species prevalence, namely: (i) common species—observed in >25% of the ponds, (ii) species of moderate occurrence—observed in ≥10% and ≤25% of the ponds, and (iii) rare species—observed in <10% of the ponds. We distinguished between ‘single survey ponds’ and ‘persisting ponds’. Single survey ponds are those that: (i) figured in the first survey but had disappeared or were without amphibians in the third survey, or (ii) figured in the third survey but were missed or without amphibians in the first survey, or had been newly created. This latter category included 22 field ponds restored or created by the Parc Naturel Régional (J. Robilliard, pers.comm., April 2011). Persisting ponds are those that were present and with amphibians at both the first and third survey. Information on pond presence from 1992 was not used within this classification due to the conditions of drought over the preceding 1991–1992 winter, so that many ponds present at the first and third survey did not hold water and were unavailable for amphibian reproduction.
On average, ponds were visited most often in the first survey (average 3.0 visits, range 1–5), compared to the second (average 2.0, range 1–7) and third surveys (average 2.5, range 1–4). Within the first survey the number of visits was higher for species-rich ponds than for species-poor ponds (for data see Appendix II in Supplementary materials), constituting a potential bias to the surveying results. However, more visits to many ponds were often made with additional interests in mind, such as phenology, larval growth and metamorphosis, breeding behaviour and inter-species relationships. As a result, we consider that, in effect, the surveys have been representative in terms of species search effort per locality and that the species presence/absence data for each pond is accurate. We were frequently denied access over parts of landscape Sections 1, 2 and 9. In addition, initial visits showed that several large-scale arable and forested areas in the north and the east turned out to be poor in waterbodies and amphibians, and these were visited infrequently.
To determine how the terrestrial habitat around ponds influenced the presence of amphibian species using them, land-use data were extracted from published maps for a 200 m radius around each pond (Curado et al. 2011). This radius was chosen as a compromise between mapping accuracy, average inter-pond distance in the study area and the distance that adult amphibians reside, migrate or disperse from ponds (Semlitsch and Bodie 2003; Smith and Green 2005; Trochet et al. 2014). Land use data were also extracted over hypothesized inter-pond dispersal routes (see below). The dates for the environmental maps precede the biological data gathering by about a decade. We consider this appropriate for our study because of the observed time-lag between agriculture-mediated habitat loss and the impact this has on population persistence (Löfvenhaft et al. 2004; Piha et al. 2007). Ten land-use classes were distinguished: arable, dunes-sand, dunes-grass, dunes-shrub, forest, marsh, pasture, quarry, transport and urban. Upon analysis, the three dune classes were grouped together (dunes), as were transport and urban (TU). GIS analyses were carried out with ILWIS 3.3 (ILWIS 2005) and statistical analyses were done with SPSS 20 (IBM Corp. 2011).
Associations of amphibian species occurrences, land-use and pond type were estimated with a Canonical Correspondence Analyis (CCA) in Canoco 5 (Šmilauer and Lepš 2014) under settings suggested by the software. Land-use data were calculated as arcsine transformed fractions (number of pixels representing land-use class/number of pixels considered). Pond types were binary coded and rare species were downweighted. The survey results, along with the CCA classification, indicated a sharp decline in drinking trough and vegetated pond habitats, which typically support the presence of Alytes obstetricans and Triturus cristatus. This led us to search for a concomitant decline in the potential for dispersal for these two species in particular.
To analyse landscape-derived resistance to amphibian dispersal we worked under the assumption that good habitat to live in is good habitat to disperse through (Mateo-Sánchez et al. 2015; see Zeller et al. 2012 for a general discussion). We associated the presence of declining species with the widespread landscape features arable, pasture and TU of the first survey in a weighted logistic regression analysis. This indicated a positive association of declining species with pasture and negative associations with arable and TU. Accordingly, dispersal cost models were built with low landscape resistance values for pasture and high values for arable and TU. With this approach we largely avoided the use of ‘expert knowledge’ (Compton et al. 2007) for which results may be ambiguous (Charney 2012; Janin et al. 2009), or may generate false positive assessments.
For ease of analysis, the very large number of potential dispersal paths that might be taken by a naïve disperser were summarized as Euclidian distances between occupied ponds. These abstracted semi-random walks we call ‘links’. In order not to saturate the landscape maps with potential dispersal paths and to reduce spatial autocorrelation, only links were considered that make up a so-called ‘Gabriel network’. This is a type of network that reduces the many possible connections between nearby points in space while still demonstrating connectivity in a meaningful way. Gabriel networks were determined with Passage 2.0 software (Rosenberg and Anderson 2011). The dispersal path of an informed disperser, which we term as a ‘corridor’, was calculated with a least-cost algorithm in Linkage Mapper (McRae and Kavanagh 2011). Only corridors corresponding to matching links in the Gabriel network were considered in our analysis.
Results
Amphibian species presence and decline
We recorded 13 amphibian species in the first survey, 11 in the second survey, and 12 at the third survey (Appendix II in Supplementary materials). The observations for the first and third survey are plotted in Appendix III in Supplementary materials. Rana arvalis was only observed at the first survey and the rarely recorded Pelophylax kl. esculentus was not identified in the second survey. Waterbodies with one or more potentially breeding amphibian species present (‘ponds’) were found N = 209 times in the first survey, N = 95 in the second survey and N = 189 in the third survey. The average number of amphibian species per pond was 3.7 (range 1–10) in the first survey, 2.9 (range 1–8) in the second survey and 3.0 (range 1–9) in the third survey. In the single survey ponds, the average species number went down significantly from 3.8 (range 1–10, N = 163) in the first survey to 3.0 (range 1–9, N = 143) in the third survey (Mann–Whitney U-test, U = 9148, Z = −3.17, P < 0.01). In 46 persisting ponds, the average species number went down from 3.5 (range 1–8) to 3.0 (range 1–7), this difference being statistically significant (Wilcoxon matched pairs test, W = 159.5, Z = −2.16, P < 0.05). The 22 newly created field ponds studied at the third survey had 3.6 species (range 2–7) and another 57 older field ponds had 3.2 species (range 1–6; Appendix II in Supplementary materials). This difference is not statistically significant (Mann–Whitney U-test, U = 535.5, Z = −1.00, P > 0.05).
The proportion of occupied ponds did not change significantly for five species between surveys (Table 1, panel A). However, the proportion of occupied ponds declined significantly for six species (A. obstetricans, Epidalea calamita, Hyla arborea, L. vulgaris, Rana temporaria and T. cristatus) and increased for one species (Salamandra salamandra). For persisting ponds, no significant change in the proportion occupied was noted, except for a strong decline in A. obstetricans from 33% to 8% of ponds being occupied (Table 1, panel B). When panels A and B of Table 1 were compared, the proportion of occupied ponds was not significantly different for any species, except for H. arborea that, at the third survey, was more frequent in persisting ponds than in single survey ponds (Table 1, panel C).
Partitioned over the 12 landscape sections, the proportion of occupied ponds declined for A. obstetricans in four sections and for T. cristatus in three sections, with mostly highly significant signals (Table 2). Four species (E. calamita, H. arborea, L. vulgaris and R. temporaria) declined in one or two sections, with modest statistical support (P < 0.05). Two species (Bufo bufo and L. vulgaris) increased in one section, also with modest statistical support. Ignoring the data points for which statistical support is modest, a decline stands out of A. obstetricans and T. cristatus in the landscape Sections 5, 9 and 11.
Community analysis
The Canonical Correspondence Analysis (CCA) revealed three species-environment assemblages in the first survey data. First is a group with the common anuran species B. bufo and R. temporaria typical of marshes, ponds with poor aquatic vegetation (B. bufo) and shallow ponds (R. temporaria), together in the top part of the CCA plot (Fig. 2a). Loosely associated to this group are P. kl. esculentus at inland pasture and R. arvalis at marshes. The second assemblage is a group with the five salamander species, along with A. obstetricans, extending over the lower left section of the CCA plot. These species are typically associated with a variety of terrestrial and aquatic habitats. For the two species which later undergo a strong decline, namely A. obstetricans and T. cristatus, the associated land-use types are quarries, TU, and moderately vegetated ponds. The drinking trough pond type is found to support Ichthyosaura alpestris and L. vulgaris, while arable and forest land-uses are associated with S. salamandra and L. helveticus. The third group, consisting of the anuran species E. calamita, H. arborea and Pelodytes punctatus, is typically associated with the dunes and to a lesser extent with marsh and quarries. In the CCA for the third survey S. salamandra associates with streams. The dune and marsh species are now joined by A. obstetricans, T. cristatus (Fig. 2b) and by L. vulgaris, which declined from the second to the third survey (Appendix II in Supplementary materials).
Population networks
Gabriel networks for locations of A. obstetricans and T. cristatus are shown in Fig. 3. The decline in observed pond use translates to a lower number of inter-pond connections. For 46 persisting ponds, the network appears denser in the southern agricultural area and along the coast than in the northern agricultural area (Fig. 3e), while the creation of new ponds helped to restore the coverage of the pond network (Fig. 3f). For examples of population and pond loss see Appendices IV, V and VI in Supplementary materials.
Changes in land use
The most prominent change in land use in the study area has been the loss of pasture land, of between 7 and 22% in measured areas (Fig. 4, see also Fig. 1 and Appendix I in Supplementary materials). A local trend is apparent with a more prominent decline in the southern agricultural land (Section 12) than in the north (Section 11). Pasture loss is marginally higher around rather than in between breeding ponds and for persisting ponds compared to ponds with declining species. The loss of pasture is, to some degree, offset by an increase of pasture elsewhere, but we have no information on its impact on amphibian wildlife. Presumably modern hay meadows with no ponds are less favourable than traditional cattle pastures with ponds.
The logistic regression analysis yielded a significant association between the presence/absence of A. obstetricans and T. cristatus with the widespread land-use classes of arable, pasture and TU. The result is Po = (1/(1 + exp*(1.158*arable − 1.006*pasture + 3.866*TU + 0.0*[other land use classes] − 0.194))), in which Po is the probability of occurrence of A. obstetricans, T. cristatus, or both. The fit of the model is Cohen’s kappa 0.62 which qualifies as ‘good’ (Altman 1991). The analyses were repeated for the variables individually, showing that the variable TU is not by itself significant (P = 0.219), arable is marginally significant (P = 0.057) and pasture is significant (P = 0.033). The land use resistance values following from these formulae are 0.72 for arable, 0.23 for pasture, 0.98 for TU and 0.45 for the other land use classes in combination. We accept the model as relevant because it makes biological and intuitive sense. The suitability of the terrestrial habitat around occupied ponds, shown by low values in Fig. 5, was better for A. obstetricans and T. cristatus and for the set of persisting ponds than for the study area as a whole. General habitat suitability increases in order Outer area to Northern agricultural land (Section 11) to Southern agricultural land (Section 12) (Figs. 1, 5). Not surprisingly, this is also the order at which ponds and pasture are being lost.
Potential for amphibian dispersal
The dispersal paths expressed as corridors are largely projected over pasture and, although their lengths in km are longer than the lengths of corresponding links, the resistance encountered is less (Table 3). The average resistance by the landscape over the hypothesized dispersal trajectories, calculated as either links or as corridors, has significantly increased for persisting ponds from the first to the third survey (Table 3). For ponds with T. cristatus, however, this effect is not significant and for A. obstetricans it is modestly (links) or marginally significant (corridors).
In the landscape here studied, in which the habitats are patchy and have a small grain relative to inter-pond distances (Fig. 1, Appendices I and III in Supplementary materials), the dispersal route chosen by the informed dispersal mode is not that much different from the path that summarizes the naïve dispersal mode. We illustrate this with an extreme example in which the elongated shape of the Marquise—Rinxent agglomeration (TU, with high resistance) does not much affect the calculated connectivity of A. obstetricans and T. cristatus populations to the north and south (Fig. 6). The generality of this effect is shown by the significant correlation between the resistance to dispersal of links versus corridors (Table 3).
Discussion
A commonly occurring land-use change adversely affecting dispersal and population presence is the conversion of pasture into arable fields, along with the consequent loss of cattle ponds that amphibians use for breeding (e.g., Nyström et al. 2007; Piha et al. 2007; Janin et al. 2009; Curado et al. 2011; Hartel and von Wehrden 2013). We here studied the dpt. Pas-de-Calais which is among the most intensive agricultural production centres of France (Bas et al. 2009). We documented the persistence of, and connectivity among, amphibian populations as a function of the loss of aquatic and terrestrial habitats but declines in species richness have been reported for other (e.g., floral) groups also (Van Calster et al. 2008; Fried et al. 2009).
Species accounts and population developments
Common species
Bufo bufo was the most frequently observed species in all three surveys and was encountered in all 12 land use sections and in a wide variety of pond types (Appendix I in Supplementary materials). The newts I. alpestris and L. helveticus were and remained widely distributed throughout all surveys. Lissotriton vulgaris declined in the agricultural land of Section 11, but remained well-represented in the dune habitats of Section 7. A relatively low recording frequency for Rana temporaria may be due to its early breeding, in combination with newt predation on embryos and hatchlings (Denton and Beebee 1991).
Species of moderate occurrence
Epidalea calamita and H. arborea were found in the two dune areas and adjacent marshes along with several more or less distant occurrences inland. The marked decline of E. calamita in the Section 7 dune habitat may be caused by the regrowth of vegetation over open areas created by military activities in the Second World War. Indeed, the increase of grass and shrubs from the first to the third survey is substantial (see Fig. 1b and Appendix I in Supplementary materials). Clearing vegetation is a common practice in conservation management for E. calamita (Denton et al. 1997; McGrath and Lorenzen 2010; Buckley et al. 2014), and is likely to be required to restore populations in this area. The high frequency of H. arborea at persisting ponds (Table 1) is atypical (Schneider and Grosse 2009 and references therein). The decline of H. arborea was most pronounced in the agricultural land of Section 11, where three other species also declined significantly. Numerical declines may be more or less pronounced than shown by presence/absence data from ponds, and quantitative surveys are required, e.g., by counting egg-strings (E. calamita), or by recording the calls of displaying males (both species) to assess their current population status.
Rare species
Rana arvalis was observed in the first survey (see also Zuiderwijk 1980) and not later on. It would however be premature to declare the species locally extinct, because the marshes where we found it are popular for duck-hunting and access was frequently denied (more so in 2011 than in 1974). The species persists in the south of dpt. Pas-de-Calais and a population was recently discovered in the Picardie region (Caby et al. 2000; Godin and Thiriet 2012). Pelodytes punctatus was found in three areas with remarkably different environmental characteristics, namely dunes (Section 7), quarries (Section 9) and agricultural land (Section 11). For reasons not understood, P. kl. esculentus is absent from the coastal zone, whereas more inland it is fairly common (Godin 2002). Salamandra salamandra larvae were found in standing water as well as in small streams, and the presence of the species at some coastal calcareous cliffs is notable (as in Thirion et al. 2014). Since the focus in our surveys was on standing water bodies, the occurrence of S. salamandra may have been underestimated.
Species in strong decline
Two species, T. cristatus and A. obstetricans stand out from the others on account of a sharp decline over more than one area (Tables 1, 2). The observations at the second survey suggest that the decline of A. obstetricans preceded that of T. cristatus (Appendix II in Supplementary materials). For both species the decline was concentrated in Sections 5, 9 and 11. Alytes obstetricans and T. cristatus share some of their aquatic habitat requirements (vegetated field ponds, drinking troughs) and it is presumably no coincidence that these species declined in similar fashion. However, a sharp decline of A. obstetricans (and not T. cristatus) was also observed at 46 persisting ponds (from 32 to 6%), suggesting threats additional to pond loss, such as fish introductions and disease. In particular A. obstetricans has been reported to decline under the influence of Chytridiomycosis and ranavirus (Bosch et al. 2001; Price et al. 2014; Rosa et al. 2013). However, the testing for the prevalence of disease organisms fell outside the scope of our study.
Population developments
Measured through the presence/absence of 13 species, the amphibian fauna studied has been remarkably stable, except for the severe decline shown by two species (A. obstetricans and T. cristatus) and the possible local extinction of R. arvalis. For the other species, the overall situation appears similar to that recorded by Crochet et al. (2004) for the south of France, where 56 ponds were surveyed with a ca. 30 yr interval without major declines, as far as detectable with presence/absence data. Current ‘hot-spots’ for the amphibians of the coastal zone of dpt. Pas-de-Calais are Sections 3 and 6, both of which are relatively small, pond-rich areas. These areas are currently under conservation management, where they were not at the time of the first survey.
Agricultural reform, amphibian dispersal and prospects for future research
It was only recently recognized that ponds and other small sized wetlands may make a significant contribution to the biodiversity of entire landscapes (Williams et al. 2003; Gioria et al. 2010; Ruggiero et al. 2008; Scheffer et al. 2006). However, due to their small size, ponds are prone to destruction and to increased isolation through structural changes in the surrounding landscape (Boothby 2003). The pond loss we recorded amounts to 3.5% per year (Curado et al. 2011). This is higher than in most other areas studied (e.g. Wood et al. 2003) but lower than what we observed in western France (Visser et al. 2017). Moreover, new ponds are also being created, making this a dynamic system.
The potential dispersal of pond breeding amphibians remains difficult to assess. In our analyses we made the principal decision not to rely on expert opinion to assess land-use induced resistance to dispersal but to use values derived from presence/absence data. Yet, it is worth noting that the resistance values that we determined are broadly similar to those suggested by experts (cf. Ray et al. 2002; Lenhardt et al. 2013). A consensus exists on the general negative influence of urbanization and arable cultivation (Greenwald et al. 2009; Riley et al. 2005; Trochet et al. 2016) and the heavy toll that roads inflict on amphibian populations is well documented (Fahrig and Rytwinski 2009; Garriga et al. 2012; Glista et al. 2008; Hartel et al. 2010; Rytwinski and Fahrig 2012).
Our results showed that informed and naïve dispersal routes were highly similar in terms of dispersal resistance, which we relate to the mosaic configuration of terrestrial habitats. The similarity between the modelled paths for either dispersal model (informed least-cost versus uninformed random motion) (Fig. 6; Table 3), is a point made previously by Balkenhol et al. (2009) (see also Janin et al. 2009; Cushman et al. 2013). Upon this analysis we decided that a careful evaluation of dispersal model appropriateness as advocated by Baguette and Van Dyck (2007) is not meaningful under the conditions we encountered. Rather we disregarded the ‘informed’ dispersal model because of the operating temporal and spatial scales.
Considering a lifetime maximum dispersal distance of 8–9 km for newts and salamanders and ca. 12 km for frogs and toads (Smith and Green 2005; Trochet et al. 2014) the two (coastal and inland) locations of S. salamandra and P. punctatus can be considered as separate ‘closed populations’ (Sinsch 2014). However, most species in our study are ‘panmictic patchy populations, with broad gene flow among neighbouring patches’, as evidenced by the colonization of newly created ponds (Appendix II in Supplementary materials). Alytes obstetricans and T. cristatus fell into this category at the first survey, but the decline revealed by our study indicates that are currently better classified as ‘metapopulations … consisting of several interacting local populations with occasional gene flow and local extinction and colonization dynamics’ (Fig. 3). The acid test for metapopulation coherence will be the natural colonization of newly created ponds over longer distances, such as those created in our study area by the Parc Naturel Régional (Fig. 7). On the basis of our assumption that good habitat to live in is good habitat to disperse through, our prediction is that new ponds in the southern agricultural land will more rapidly be colonized than those in the northern agricultural land. This can easily be determined in the field on the basis of their mating calls (A. obstetricans) and easy-to-spot eggs (T. cristatus), with near-unity detection probabilities so that solid inventories can be made (cf. Naujokaitis-Lewis et al. 2013). Testable models can be built on the basis of land use maps and the documented dispersal capacities of the species (Laan and Verboom 1990; Arntzen and Wallis 1991) along with genetic assignment tests that allocate individuals in a new pond to their population of origin.
References
Altman DG (1991) Practical statistics for medical research. Chapman & Hall, London, UK
Arntzen JW, Wallis GP (1991) Restricted gene flow in a moving hybrid zone of the newts Triturus cristatus and T. marmoratus in western France. Evolution 45:805–826
Baguette M, van Dyck H (2007) Landscape connectivity and animal behavior: functional grain as a key determinant for dispersal. Landsc Ecol 22:1117–1129
Balkenhol N, Gugerli F, Cushman SA, Waits LP, Coulon A, Arntzen JW, Holderegger R, Wagner HH (2009) Identifying future research needs in landscape genetics: where to from here? Landsc Ecol 24:455–463
Bas Y, Renard M, Jiguet F (2009) Nesting strategy predicts farmland bird response to agricultural intensity. Agric Ecosyst Environ 134:143–147
Becker CG, Fonseca CR, Haddad CFB, Prado PI (2010) Habitat split as a cause of local population declines of amphibians with aquatic larvae. Conserv Biol 24:287–294
Beier P, Majka DR, Spencer WD (2008) Forks in the road: choices in procedures for designing wildland linkages. Conserv Biol 22:836–851
Benton TG, Vickery JA, Wilson JD (2003) Farmland biodiversity: is habitat heterogeneity the key? Trends Ecol Evol 18:182–188
Bergerot B, Tournant P, Moussus J-P, Stevens VM, Julliard R, Baguette M, Foltête JC (2013) Coupling inter-patch movement models and landscape graph to assess functional connectivity. Popul Ecol 55:193–203
Blaxter K, Robertson N (1995) From dearth to plenty: the second agricultural revolution. Cambridge University Press, Cambridge, UK
Boothby J (2003) Tackling degradation of a seminatural landscape: options and evaluations. Land Degrad Dev 14:227–243
Bosch J, Martínez-Solano I, García-París M (2001) Evidence of a chytrid fungus infection involved in the decline of the common midwife toad (Alytes obstetricans) in protected areas of Central Spain. Biol Conserv 97:331–337
Brown GP, Phillips BL, Shine R (2014) The straight and narrow path: the evolution of straight-line dispersal at a cane toad invasion front. Proc R Soc B 281:1–7
Buckley J, Beebee TJC, Schmidt BR (2014) Monitoring amphibian declines: population trends of an endangered species over 20 years in Britain. Anim Conserv 17:27–34
Caby B, Constantin de Magny G, Godin J, Marchyllie M (2000) Observation de la Grenouille des champs Rana arvalis Nilsson, 1842 (Anura, Ranidae) dans le département du Nord (France). Bulletin de la Société Herpétologique de France 95:5–18
Campbell Grant EH, Nichols JD, Lowe WH, Fagan WF (2010) Use of multiple dispersal pathways facilitates amphibian persistence in stream networks. Proc Natl Acad Sci USA 107:6936–6940
Charney ND (2012) Evaluating expert opinion and spatial scale in an amphibian model. Ecol Model 242:37–45
Chetkiewicz C-LB, Boyce MS (2009) Use of resource selection functions to identify conservation corridors. J Appl Ecol 46:1036–1047
Collins JP (2010) Amphibian decline and extinction: what we know and what we need to learn. Dis Aquat Org 92:93–99
Compton BW, McGarigal K, Cushman SA, Gamble LR (2007) A resistant-kernel model of connectivity for amphibians that breed in vernal pools. Conserv Biol 21:788–799
Crochet P-A, Chaline O, Cheylan M, Guillaume CP (2004) No evidence of general decline in an amphibian community of Southern France. Biol Conserv 119:297–304
Curado N, Hartel T, Arntzen JW (2011) Amphibian pond loss as a function of landscape change—a case study over three decades in an agricultural area of northern France. Biol Conserv 144:1610–1618
Cushman SA (2006) Effects of habitat loss and fragmentation on amphibians: a review and prospectus. Biol Conserv 128:231–240
Cushman SA, Shirk AJ, Landguth EL (2013) Landscape genetics and limiting factors. Conserv Genet 14:263–274
Decout S, Manel S, Miaud C, Luque S (2012) Integrative approach for landscape-based graph connectivity analysis: a case study with the common frog (Rana temporaria) in human-dominated landscapes. Landscape Ecol 27:267–279
Denton J, Beebee TJC (1991) Palatability of anuran eggs and embryos. Amphibia-Reptilia 12:111–114
Denton JS, Hitchings SP, Beebee TJ, Gent A (1997) A recovery program for the natterjack toad (Bufo calamita) in Britain. Conserv Biol 11:1329–1338
Donald PF, Evans AD (2006) Habitat connectivity and matrix restoration: the wider implications of agri-environment schemes. J Appl Ecol 43:209–218
Elliot NB, Cushman SA, Macdonald DW, Loveridge AJ (2014) The devil is in the dispersers: predictions of landscape connectivity change with demography. J Appl Ecol 51:1169–1178
Fahrig L, Rytwinski T (2009) Effects of roads on animal abundance: an empirical review and synthesis. Ecol Soc 14:21
Fortuna MA, Gómez-Rodríguez C, Bascompte J (2006) Spatial network structure and amphibian persistence in stochastic environments. Proc R Soc B 273:1429–1434
Fried G, Petit S, Dessaint F, Reboud X (2009) Arable weed decline in Northern France: crop edges as refugia for weed conservation? Biol Conserv 142:238–243
Gardner TA, Barlow J, Peres CA (2007) Paradox, presumption and pitfalls in conservation biology: the importance of habitat change for amphibians and reptiles. Biol Conserv 138:166–179
Garriga N, Santos X, Montori A, Richter-Boix A, Franch M, Llorente GA (2012) Are protected areas truly protected? The impact of road traffic on vertebrate fauna. Biodivers Conserv 21:2761–2774
Gioria M, Schaffers A, Bacaro G, Feehan J (2010) The conservation value of farmland ponds: predicting water beetle assemblages using vascular plants as a surrogate group. Biol Conserv 143:1125–1133
Glista DJ, DeVault TL, DeWoody JA (2008) Vertebrate road mortality predominantly impacts amphibians. Herpetol Conserv Biol 3:77–87
Godin J (2002) Degré de rareté, évolution de la distribution et particularités de l’herpétofaune de la Région Nord-Pas-de-Calais. Bulletin de la Société Herpétologique de France 104:16–35
Godin J, Thiriet J (2012) Rana arvalis Nilsson, 1842. Grenoille des champs. In: Lescure J, de Massary J-C (eds) Atlas des Amphibiens et Reptiles de France. Biotope, Mèze and Muséum National d’Histoire Naturelle, Paris, pp 134–135
Gray MJ, Smith LM, Layva RI (2004) Influence of agricultural landscape structure on a southern high plains, USA, amphibian assemblage. Landscape Ecol 19:719–729
Greenwald KR, Gibbs HL, Waite TA (2009) Efficacy of land-cover models in predicting isolation of marbled salamander populations in a fragmented landscape. Conserv Biol 25:1232–1241
Hartel T, von Wehrden H (2013) Farmed areas predict the distribution of amphibian ponds in a traditional rural landscape. PLoS ONE 8(5):e63649
Hartel T, Schweiger O, Öllerer K, Cogălniceanu D, Arntzen JW (2010) Amphibian distribution in a traditionally managed rural landscape of Eastern Europe: probing the effect of landscape composition. Biol Conserv 143:1118–1124
Heatwole H (2013) Worldwide decline and extinction of amphibians. In: Rohde K (ed) The balance of nature and human impact. Cambridge University Press, Cambridge, UK, pp 259–278
Houlahan JE, Findlay CS, Schmidt BR, Meyer AH, Kuzmin SL (2000) Quantitative evidence for global amphibian population declines. Nature 404:752–755
IBM Corp (2011) IBM SPSS statistics for windows. IBM Corp, Armonk
ILWIS (2005) ILWIS—integrated land and water information system. Remote sensing and GIS software. ITC, Enschede
Janin A, Lena J-P, Ray N, Delacourt C, Allemand P, Joly P (2009) Assessing landscape connectivity with calibrated cost-distance modelling: predicting common toad distribution in a context of spreading agriculture. J Appl Ecol 46:833–841
Keitt TH, Urban DL, Milne BT (1997) Detecting critical scales in fragmented landscapes. Conservation Ecology [online] 1: 4. http://www.consecol.org/vol1/iss1/art4/
Laan R, Verboom B (1990) Effects of pool size and isolation on amphibian communities. Biol Conserv 54:251–262
Lenhardt PP, Schäfer RB, Theissinger K, Brühl CA (2013) An expert-based landscape permeability model for assessing the impact of agricultural management on amphibian migration. Basic Appl Ecol 14:442–451
Löfvenhaft K, Runborg S, Sjögren-Gulve P (2004) Biotope patterns and amphibian distribution as assessment tools in urban landscape planning. Landsc Urban Plan 68:403–427
Marsh DM, Trenham PC (2001) Metapopulation dynamics and amphibian conservation. Conserv Biol 15:40–49
Mateo-Sánchez MC, Balkenhol N, Cushman S, Pérez T, Domínguez A, Saura S (2015) Estimating effective landscape distances and movement corridors: comparison of habitat and genetic data. Ecosphere 6:1–16
Mazerolle MJ, Desrochers A (2005) Landscape resistance to frog movements. Can J Zool 83:455–464
Mazerolle MJ, Vos CC (2006) Choosing the safest route: frog orientation in an agricultural landscape. J Herpetol 40:435–441
McGrath AK, Lorenzen K (2010) Management history and climate as key factors driving natterjack toad population trends in Britain. Anim Conserv 13:483–494
McRae BH, Kavanagh DM (2011) Linkage mapper connectivity analysis software. The Nature Conservancy, Seattle. http://www.circuitscape.org/linkagemapper
McRae BH, Hall SA, Beier P, Theobald DM (2012) Where to restore ecological connectivity? Detecting barriers and quantifying restoration benefits. PLoS ONE 7:e52604
Naujokaitis-Lewis IR, Rico Y, Lovell J, Fortin M-J, Murphy MA (2013) Implications of incomplete networks on estimation of landscape genetic connectivity. Conserv Genet 14:287–298
Nyström P, Hansson J, Månsson J, Sundstedt M, Reslow C, Broström A (2007) A documented amphibian decline over 40 years: possible causes and implications for species recovery. Biol Conserv 138:399–411
Piha H, Luoto M, Merila J (2007) Amphibian occurrence is influenced by current and historic landscape characteristics. Ecol Appl 17:2298–2309
Price SJ, Garner TWJ, Nichols RA, Balloux F, Ayres C, Mora-Cabello de Alba A, Bosch J (2014) Collapse of amphibian communities due to an introduced ranavirus. Curr Biol 24:2586–2591
Ray N, Lehmann A, Joly P (2002) Modeling spatial distribution of amphibian populations: a GIS approach based on habitat matrix permeability. Biodivers Conserv 11:2143–2165
Reidsma P, Tekelenburg T, van den Berg M, Alkemade R (2006) Impacts of land-use change on biodiversity: an assessment of agricultural biodiversity in the European Union. Agric Ecosyst Environ 114:86–102
Riley SPD, Busteed GT, Kats LB, Vandergon TL, Lee LFS, Dagit RG, Kerby JL, Fisher RN, Sauvajot RM (2005) Effects of urbanization on the distribution and abundance of amphibians and invasive species in Southern California streams. Conserv Biol 19:1894–1907
Rosa GM, Anza I, Moreira PL, Conde J, Martins F, Fisher MC, Bosch J (2013) Evidence of chytrid-mediated population declines in common midwife toad in Serra da Estrela, Portugal. Anim Conserv 16:306–315
Rosenberg MS, Anderson CD (2011) PASSaGE: pattern analysis, spatial statistics, and geographic exegesis. Version 2. Methods Ecol Evol 2:229–232
Ruggiero A, Céréghino R, Figuerola J, Marty P, Angélibert S (2008) Farm ponds make a contribution to the biodiversity of aquatic insects in a French agricultural landscape. CR Biol 331:298–308
Rytwinski T, Fahrig L (2012) Do species life history traits explain population responses to roads? A meta-analysis. Biol Conserv 147:87–98
Scheffer M, Geest GJ, van Zimmer K, Jeppesen E, Sondergaard M, Butler MG, Hanson MA, Declerck S, de Meester L (2006) Small habitat size and isolation can promote species richness: second–order effects on biodiversity in shallow lakes and ponds. Oikos 112:227–231
Schneider H, Grosse W-R (2009) Hyla arborea (Linnaeus, 1758)—Europäischer Laubfrosch. In: Grossenbacher K (ed) Handbuch der Reptilien und Amphibien Europas. Froschlurche II. Aula Verlag, Wiebelsheim, pp 5–83
Semlitsch RD (2008) Differentiating migration and dispersal processes for pond-breeding amphibians. J Wildl Manag 72:260–267
Semlitsch RD, Bodie JR (2003) Biological criteria for buffer zones around wetlands and riparian habitats. Conserv Biol 17:1219–1228
Sinsch U (2014) Movement ecology of amphibians: from individual migratory behaviour to spatially structured populations in heterogeneous landscapes. Can J Zool 92:491–502
Sinsch U, Oromi N, Miaud C, Denton J, Sanuy D (2012) Connectivity of local amphibian populations: modelling the migratory capacity of radio-tracked natterjack toads. Anim Conserv 15:388–396
Šmilauer P, Lepš J (2014) Multivariate analysis of ecological data using canoco 5, 2nd edn. Cambridge University Press, New York
Smith MA, Green DM (2005) Dispersal and the metapopulation paradigm in amphibian ecology and conservation: are all amphibian populations metapopulations ? Ecography 28:110–128
Stoate C, Báldi A, Beja P, Boatman ND, Herzon I, van Doorn A, de Snoo GR, Rakosy L, Ramwell C (2009) Ecological impacts of early 21st century agricultural change in Europe a review. J Environ Manage 91:22–46
Sutcliffe OL, Bakkestuen V, Fry G, Stabbetorp OD (2003) Modelling the benefits of farmland restoration: methodology and application to butterfly movement. Landsc Urban Plan 63:15–31
Thirion J-M, Vollette J, Mathé E, Landry G, Gironnet E (2014) Une population littorale originale de salamandre tachetée Salamandra salamandra subsp. terrestris (Linnaeus, 1758) (Amphibia; Urodela; Salamandridae). Annales de la Société des Sciences Naturelles de la Charente-Maritime 11:529–531
Trochet A, Moulherat S, Calvez O, Stevens VM, Clobert J, Schmeller DS (2014) A database of life-history traits of European amphibians. Biodivers Data J 2:e4123. doi:10.3897/BDJ.2.e4123
Trochet A, Dechartre J, Le Chevalier H, Baillat B, Calvez O, Blanchet S, Ribéron A (2016) Effects of habitat and fragmented-landscape parameters on amphibian distribution at a large spatial scale. Herpetol J 26:73–84
Tryjanowski P, Hartel T, Báldi A, Szymanski P, Tobolka M, Herzon I, Golawski A, Konvicka M, Hromada M, Jerzak L, Kujawa K (2011) Conservation of farmland birds faces different challenges in Western and Central-Eastern Europe. Acta Ornithologica 46:1–2
Tscharntke T, Klein AM, Kruess A, Steffan-Dewenter I, Thies C (2005) Landscape perspectives on agricultural intensification and biodiversity—ecosystem service management. Ecol Lett 8:857–874
Van Calster H, Vandenberghe R, Ruysen M, Verheyen K, Hermy M, Decocq G (2008) Unexpectedly high 20th century floristic losses in a rural landscape in northern France. J Ecol 96:927–936
Visser M, de Leeuw M, Zuiderwijk A, Arntzen JW (2017) Stabilization of a salamander moving hybrid zone. Ecol Evol 7:689–696
Vos CC, Goedhart PW, Lammertsma DR, Spitzen-Van der Sluijs AM (2007) Matrix permeability of agricultural landscapes: an analysis of movements of the common frog (Rana temporaria). Herpetol J 17:174–182
Williams P, Whitfield M, Biggs J, Bray S, Fox G, Nicolet P, Sear D (2003) Comparative biodiversity of rivers, streams, ditches and ponds in an agricultural landscape in Southern England. Biol Conserv 115:329–341
Wood PJ, Greenwood MT, Agnew MD (2003) Pond biodiversity and habitat loss in the UK. Area 35:206–216
Zeller K, McGarigal K, Whiteley A (2012) Estimating landscape resistance to movement: a review. Landsc Ecol 27:777–797
Zuiderwijk A (1980) Amphibian distribution patterns in western Europe. Contrib Zool 50:52–72
Acknowledgements
We thank the employees of the Parc Naturel Régional des Caps et Marais d’Opale for localiity information. WRMM thanks F. Bossuyt (Free University, Brussels) for advice and the ‘Schure-Beijerinck-Popping fonds’ and the ‘Jan Joost ter Pelkwijk fonds’ for financial support. RI thanks Naturalis Biodiversity Center for granting him a Temminck-fellowship.
Author contributions
The project was designed by JWA and AZ, fieldwork was carried out by AZ, JWA, CA and WRMM, analyses were done by JWA, RI and WRMM and the manuscript was prepared by JWA with the input of all authors.
Author information
Authors and Affiliations
Corresponding author
Additional information
Communicated by Dirk Sven Schmeller.
Electronic supplementary material
Below is the link to the electronic supplementary material.
Rights and permissions
Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
About this article
Cite this article
Arntzen, J.W., Abrahams, C., Meilink, W.R.M. et al. Amphibian decline, pond loss and reduced population connectivity under agricultural intensification over a 38 year period. Biodivers Conserv 26, 1411–1430 (2017). https://doi.org/10.1007/s10531-017-1307-y
Received:
Revised:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s10531-017-1307-y