Skip to main content
Log in

Comparison between Escherichia coli K-12 strains W3110 and MG1655 and wild-type E. coli B as platforms for xylitol production

  • Original Research Paper
  • Published:
Biotechnology Letters Aims and scope Submit manuscript

Abstract

Escherichia coli W3110 was previously engineered to produce xylitol from a mixture of glucose plus xylose by expressing xylose reductase (CbXR) and deleting xylulokinase (ΔxylB), combined with either plasmid-based expression of a xylose transporter (XylE or XylFGH) (Khankal et al., J Biotechnol, 2008) or replacing the native crp gene with a mutant (crp*) that alleviates glucose repression of xylose transport (Cirino et al., Biotechnol Bioeng 95:1167–1176, 2006). In this study, E. coli K-12 strains W3110 and MG1655 and wild-type E. coli B were compared as platforms for xylitol production from glucose-xylose mixtures using these same strategies. The engineered strains were compared in fed-batch fermentations and as non-growing resting cells. Expression of CRP* in the E. coli B strains tested was unable to enhance xylose uptake in the presence of glucose. Xylitol production was similar for the (crp*, ΔxylB)-derivatives of W3110 and MG1655 expressing CbXR (average specific productivities of 0.43 g xylitol g cdw−1 h−1 in fed-batch fermentation). In contrast, results varied substantially between different ΔxylB-derivative strains co-expressing either XylE or XylFGH. The differences in genetic background between these host strains can therefore profoundly influence metabolic engineering strategies.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2

Similar content being viewed by others

References

  • Aiba H, Nakamura T, Mitani H et al (1985) Mutations that alter the allosteric nature of cAMP receptor protein of Escherichia coli. EMBO J 4:3329–3332

    PubMed  CAS  Google Scholar 

  • Atlung T, Nielsen HV, Hansen FG (2002) Characterisation of the allelic variation in the rpoS gene in thirteen K-12 and six other non-pathogenic Escherichia coli strains. Mol Genet Genomics 266:873–881

    Article  PubMed  CAS  Google Scholar 

  • Belduz AO, Lee EJ, Harman JG (1993) Mutagenesis of the cyclic AMP receptor protein of Escherichia coli: targeting positions 72 and 82 of the cyclic nucleotide binding pocket. Nucleic Acids Res 21:1827–1835

    Article  PubMed  CAS  Google Scholar 

  • Blattner FR, Plunkett G, Bloch CA et al (1997) The complete genome sequence of Escherichia coli K-12. Science 277:1453–1469

    Article  PubMed  CAS  Google Scholar 

  • Causey TB, Zhou S, Shanmugam KT et al (2003) Engineering the metabolism of Escherichia coli W3110 for the conversion of sugar to redox-neutral and oxidized products: Homoacetate production. Proc Natl Acad Sci USA 100:825–832

    Article  PubMed  CAS  Google Scholar 

  • Cirino PC, Chin JW, Ingram LO (2006) Engineering Escherichia coli for xylitol production from glucose-xylose mixtures. Biotechnol Bioeng 95:1167–1176

    Article  PubMed  CAS  Google Scholar 

  • Dien BS, Nichols NN, Bothast RJ (2001) Recombinant Escherichia coli engineered for production of L-lactic acid from hexose and pentose sugars. J Ind Microbiol Biotechnol 27:259–264

    Article  PubMed  CAS  Google Scholar 

  • Eppler T, Boos W (1999) Glycerol-3-phosphate-mediated repression of malT in Escherichia coli does not require metabolism, depends on enzyme IIA(Glc) and is mediated by cAMP levels. Mol Microbiol 33:1221–1231

    Article  PubMed  CAS  Google Scholar 

  • Hayashi K, Morooka N, Yamamoto Y et al (2006) Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol Syst Biol 2:2006.0007. doi:10.1038/msb4100049

  • Hengge-Aronis R (2002) Signal transduction and regulatory mechanisms involved in control of the sigma(S) (RpoS) subunit of RNA polymerase. Microbiol Mol Biol Rev 66:373–395

    Article  PubMed  CAS  Google Scholar 

  • Herring CD, Palsson BO (2007) An evaluation of comparative genome sequencing (CGS) by comparing two previously-sequenced bacterial genomes. BMC Genomics 8:274. doi:10.1186/1471-2164-8-274

    Article  PubMed  Google Scholar 

  • Hogema BM, Arents JC, Bader R et al (1998) Inducer exclusion in Escherichia coli by non-PTS substrates: The role of the PEP to pyruvate ratio in determining the phosphorylation state of enzyme IIA(Glc). Mol Microbiol 30:487–498

    Article  PubMed  CAS  Google Scholar 

  • Jishage M, Ishihama A (1997) Variation in RNA polymerase sigma subunit composition within different stocks of Escherichia coli W3110. J Bacteriol 179:959–963

    PubMed  CAS  Google Scholar 

  • Karimova G, Ladant D, Ullmann A (2004) Relief of catabolite repression in a cAMP-independent catabolite gene activator mutant of Escherichia coli. Res Microbiol 155:76–79

    Article  PubMed  CAS  Google Scholar 

  • Khankal R, Chin JW, Cirino PC (2008) Role of xylose transporters in xylitol production from engineered Escherichia coli. J Biotechnol 134:246–252

    Google Scholar 

  • Kwon SG, Park SW, Oh DK (2006) Increase of xylitol productivity by cell-recycle fermentation of Candida tropicalis using submerged membrane bioreactor. J Biosci Bioeng 101:13–18

    Article  PubMed  CAS  Google Scholar 

  • Luli GW, Strohl WR (1990) Comparison of growth, acetate production, and acetate inhibition of Escherichia coli strains in batch and fed-batch fermentations. Appl Environ Microbiol 56:1004–1011

    PubMed  CAS  Google Scholar 

  • Noronha SB, Yeh HJC, Spande TF et al (2000) Investigation of the TCA cycle and the glyoxylate shunt in Escherichia coli BL21 and JM109 using C-13-NMR/MS. Biotechnol. Bioeng 68:316–327

    Article  PubMed  CAS  Google Scholar 

  • Phue JN, Shiloach J (2004) Transcription levels of key metabolic genes are the cause for different glucose utilization pathways in E. coli B (BL21) and E. coli K (JM109). J Biotechnol 109:21–30

    Article  PubMed  CAS  Google Scholar 

  • Phue JN, Kedem B, Jaluria P et al (2007) Evaluating microarrays using a semiparametric approach: Application to the central carbon metabolism of Escherichia coli BL21 and JM109. Genomics 89:300–305

    Article  PubMed  CAS  Google Scholar 

  • Sabourin D, Beckwith J (1975) Deletion of the Escherichia coli crp gene. J Bacteriol 122:338–340

    Google Scholar 

  • Saier MH, Crasnier M (1996) Inducer exclusion and the regulation of sugar transport. Res Microbiol 147:482–489

    Article  PubMed  CAS  Google Scholar 

  • Shiloach J, Kaufman J, Guillard AS et al (1996) Effect of glucose supply strategy on acetate accumulation, growth, and recombinant protein production by Escherichia coli BL21 (lambda DE3) and Escherichia coli JM109. Biotechnol Bioeng 49:421–428

    Article  PubMed  CAS  Google Scholar 

  • Song SG, Park C (1997) Organization and regulation of the D-xylose operons in Escherichia coli K-12: XylR acts as a transcriptional activator. J Bacteriol 179:7025–7032

    PubMed  CAS  Google Scholar 

  • Subbarayan PR, Sarkar M (2004) A comparative study of variation in codon 33 of the rpoS gene in Escherichia coli K-12 stocks: Implications for the synthesis of sigma(S). Mol Genet Genomics 270:533–538

    Article  PubMed  CAS  Google Scholar 

  • Vijayendran C, Polen T, Wendisch VF et al (2007) The plasticity of global proteome and genome expression analyzed in closely related W3110 and MG1655 strains of a well-studied model organism, Escherichia coli K-12. J Biotechnol 128:747–761

    Article  PubMed  CAS  Google Scholar 

Download references

Acknowledgments

We acknowledge W. Boos (University of Konstanz) for providing strain ET25. This research was made possible by a grant from the NSF (BES0519516) and support from the Penn State Associate Vice President for Research.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Patrick C. Cirino.

Additional information

Reza Khankal and Francesca Luziatelli contributed equally to the paper.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Khankal, R., Luziatelli, F., Chin, J.W. et al. Comparison between Escherichia coli K-12 strains W3110 and MG1655 and wild-type E. coli B as platforms for xylitol production. Biotechnol Lett 30, 1645–1653 (2008). https://doi.org/10.1007/s10529-008-9720-7

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10529-008-9720-7

Keywords

Navigation