Abstract
Zebrafish Cu/Zn-superoxide dismutase (ZSOD1) has one free cysteine (Cys-7) in a first β-strand with lower thermostability. We predicted the stability would be increased with single-point mutation at 70°C via the I-Mutant 2.0 server, and generated a mutant SOD with replacement of the free Cys to Ala (ZSODC7A) by site-directed mutagenesis. The mutant was expressed and purified from the Escherichia coli strain AD494(DE3)pLysS and the yield was 2 mg from 0.4 L of culture. The ZSODC7A was heated at 90°C. In a time-dependent assay, the time interval for 50% inactivation was 32 min, and its thermal inactivation rate constant K d was 2 × 10−2 min−1. The mutant was still activated in broad pH range (2.3–12), and had only a moderate effect under sodium dodecyl sulfate treatment. The calculated specific activity of the mutant was 3980 U/mg, twice that of wild-type ZSOD1. In addition, we soaked fish larva with equal enzyme units of either ZSOD1 or ZSODC7A for 2 h, and then stressed them with 100 ppm of paraquat to induce oxidative injury. The survival rate was significant.
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References
JL Abernethy HM Steinman RL Hill (1974) ArticleTitleBovine erythrocyte superoxide dismutase. Subunit structure and sequence location of the intrasubunit disulfide bond J Biol Chem 249 7339–7347
A Battistoni S Folcarelli L Cervoni F Polizio A Desideri A Giartosio G Rotilio (1998) ArticleTitleRole of the dimeric structure in Cu,Zn superoxide dismutase. pH-dependent, reversible denaturation of the monomeric enzyme from Escherichia coli J Biol Chem 273 5655–5661 Occurrence Handle10.1074/jbc.273.10.5655
C Beauchamp I Fridovich (1971) ArticleTitleImproved assays and an assay applicable to acrylamide gel Anal Biochem 44 276–287 Occurrence Handle10.1016/0003-2697(71)90370-8
MC Bonaccorsi di Patti MT Carri R Gabbianelli R Gai ParticleDa C Volpe A Giartosio G Rotilio A Battistoni (2000) ArticleTitleA free cysteine residue at the dimer interface decreases conformational stability of Xenopus laevis copper,zinc superoxide dismutase Arch Biochem Biophys 377 284–289 Occurrence Handle10.1006/abbi.2000.1786
CJ Brock JE Walker (1980) ArticleTitleSuperoxide dismutase from Bacillus stearothermophilus. Complete amino acid sequence of a manganese enzyme Biochemistry 19 2873–2882 Occurrence Handle10.1021/bi00554a009
Calabrese L, Polticelli F, O’Neill P, Galtieri A, Bara D, Schinina E, Bossa F (1989) Substitution of arginine for lysine 134 alters electrostatic parameters of the active site in shark Cu, Zn superoxide dismutase. FEBS Lett 250, 49–52
E Capriotti P Fariselli R Casadio (2004) ArticleTitleA neural-network- based method for predicting protein stability changes upon single point mutations Bioinformatics 20 I63–I68 Occurrence Handle10.1093/bioinformatics/bth928
E Capriotti P Fariselli R Casadio (2005) ArticleTitleI-Mutant2.0: predicting stability changes upon mutation from the protein sequence or structure Nucleic Acids Res 33 W306–W310 Occurrence Handle10.1093/nar/gki375
Z Cui Y Yang CD Kaufman D Agalliu PB Hackett (2003) ArticleTitleRecA-mediated, targeted mutagenesis in zebrafish Mar Biotechnol (NY) 5 174–184 Occurrence Handle10.1007/s10126-002-0059-0
HJ Forman I Fridovich (1973) ArticleTitleOn the stability of bovine superoxide dismutase. The effects of metals J Biol Chem 248 2645–2649
I Fridovich (1995) ArticleTitleSuperoxide radical and superoxide dismutases Annu Rev Biochem 64 97–112 Occurrence Handle10.1146/annurev.bi.64.070195.000525
I Fridovich (1997) ArticleTitleSuperoxide anion radical (O2 −), superoxide dismutases, and related matters J Biol Chem 272 18515–18517 Occurrence Handle10.1074/jbc.272.30.18515
A Garcia-Gonzalez JL Ochoa (1999) ArticleTitleAnti-inflammatory activity of Debaryomyces hansenii Cu,Zn-SOD Arch Med Res 30 69–73 Occurrence Handle10.1016/S0188-0128(98)00005-0
A Gudmundsdottir HM Palsdottir (2005) ArticleTitleAtlantic cod trypsins: from basic research to practical applications Mar Biotechnol (NY) 7 IssueID2 77–88 Occurrence Handle10.1007/s10126-004-0061-9
RA Hallewell KC Imlay P Lee NM Fong C Gallegos ED Getzoff JA Tainer DE Cabelli P Tekamp-Olson GT Mullenbach (1991) ArticleTitleThermostabilization of recombinant human and bovine CuZn superoxide dismutases by replacement of free cysteines Biochem Biophys Res Commun 181 474–480 Occurrence Handle10.1016/S0006-291X(05)81443-3
B Halliwell JM Gutteridge (1990) ArticleTitleRole of free radicals and catalytic metal ions in human disease: an overview Methods Enzymol 186 1–85
JI Harris AD Auffret FD Northrop JE Walker (1980) ArticleTitleStructural comparisons of superoxide dismutases Eur J Biochem 106 297–303 Occurrence Handle10.1111/j.1432-1033.1980.tb06023.x
IPCS (1984) Paraquat and Diquat, Environmental Health Criteria, 39, WHO, Geneva, pp. 13–128
CF Ken JF Shaw JL Wu CT Lin (1998) ArticleTitleMolecular cloning of a cDNA coding for copper/zinc superoxide dismutase from zebrafish and its expression in Escherichia coli J Agric Food Chem 46 2863–2867 Occurrence Handle10.1021/jf970763e
CF Ken DF Weng KJ Duan CT Lin (2002) ArticleTitleCharacterization of copper/zinc-superoxide dismutase from Pagrus major cDNA and enzyme stability J Agric Food Chem 50 784–789 Occurrence Handle10.1021/jf0111559
CF Ken CT Lin JF Shaw JL Wu (2003a) ArticleTitleCharacterization of fish Cu/Zn-superoxide dismutase and its protection from oxidative stress Mar Biotechnol (NY) 5 167–173 Occurrence Handle10.1007/s10126-002-0058-1
CF Ken YF Cheng CF Chang CT Lin (2003b) ArticleTitleCopper/zinc-superoxide dismutase from Epinephelus malabaricus cDNA and enzyme property J Agric Food Chem 51 5688–5694 Occurrence Handle10.1021/jf030162p
CF Ken TM Hsiung ZX Huang RH Juang CT Lin (2005) ArticleTitleCharacterization of Fe/Mn-superoxide dismutase from diatom Thallassiosira weissflogii: cloning, expression, and property J Agric Food Chem 53 1470–1474 Occurrence Handle10.1021/jf048269f
T Kondo H Terajima T Todoroki T Hirano Y Ito T Usia K Messmer (1999) ArticleTitlePrevention of hepatic ischemia-reperfusion injury by SOD-DIVEMA conjugate J Surg Res 85 26–36 Occurrence Handle10.1006/jsre.1999.5591
JW Lee JH Roe SO Kang (2002) ArticleTitleNickel-containing superoxide dismutase Methods Enzymol 349 90–101
CT Lin MT Lin YT Chen JF Shaw (1995) ArticleTitleSubunit interaction enhances enzyme activity and stability of sweet potato cytosolic Cu/Zn-superoxide dismutase purifiedby a His-tagged recombinant protein method Plant Mol Biol 28 303–311 Occurrence Handle10.1007/BF00020249
MT Lin TJ Kuo CT Lin (1998) ArticleTitleMolecular cloning of a cDNA encoding Copper/Zinc superoxide dismutase from papaya fruit and overexpression in Escherichia coli J Agric Food Chem 46 344–348 Occurrence Handle10.1021/jf9706843
MW Lin MT Lin CT Lin (2002) ArticleTitleCopper/zinc-superoxide dismutase from lemon cDNA and enzyme stability J Agric Food Chem 50 7264–7270 Occurrence Handle10.1021/jf0207070
SI Liochev I Fridovich (2003) ArticleTitleMutant Cu,Zn superoxide dismutases and familial amyotrophic lateral sclerosis: evaluation of oxidative hypotheses Free Radic Biol Med 34 1383–1389 Occurrence Handle10.1016/S0891-5849(03)00153-9
WX Luo T Cheng BQ Guan SW Li J Miao J Zhang NS Xia (2006) ArticleTitleVariants of green fluorescent protein GFPxm Mar Biotechnol (NY) 8 560–566 Occurrence Handle10.1007/s10126-006-6006-8
DP Malinowski I Fridovich (1979) ArticleTitleSubunit association and side-chain reactivities of bovine erythrocyte superoxide dismutase in denaturing solvents Biochemistry 18 5055–5060 Occurrence Handle10.1021/bi00590a005
DE McRee SM Redford ED Getzoff JR Lepock RA Hallewell JA Tainer (1990) ArticleTitleChanges in crystallographic structure and thermostability of a Cu,Zn superoxide dismutase mutant resulting from the removal of a buried cysteine J Biol Chem 265 14234–14241
JI Park CM Grant MJ Davies IW Dawes (1998) ArticleTitleThe cytoplasmic Cu,Zn superoxide dismutase of Saccharomyces cerevisiae is required for resistance to freeze-thaw stress. Generation of free radicals during freezing and thawing J Biol Chem 273 22921–22928 Occurrence Handle10.1074/jbc.273.36.22921
TL Parkes AJ Elia D Dickinson AJ Hilliker JP Phillips GL Boulianne (1998) ArticleTitleExtension of Drosophila lifespan by overexpression of human SOD1 in motorneurons Nat Genet 19 171–174 Occurrence Handle10.1038/534
JR Pedrajas J Peinado J Lopez-Barea (1995) ArticleTitleOxidative stress in fish exposed to model xenobiotics. Oxidatively modified forms of Cu, Zn-superoxide dismutase as potential biomarkers Chem-Biol Interact 98 267–282 Occurrence Handle10.1016/0009-2797(95)03651-2
LJ Perry R Wetzel (1987) ArticleTitleThe role of cysteine oxidation in the thermal inactivation of T4 lysozyme Protein Eng 1 101–105 Occurrence Handle10.1093/protein/1.2.101
JS Richardson (1981) ArticleTitleThe anatomy and taxonomy of protein structure Adv Protein Chem 34 167–339 Occurrence Handle10.1016/S0065-3233(08)60520-3
JA Roe A Butler DM Scholler JS Valentine L Marky KJ Breslauer (1988) ArticleTitleDifferential scanning calorimetry of Cu,Zn-superoxide dismutase, the apoprotein, and its zinc-substituted derivatives Biochemistry 27 950–958 Occurrence Handle10.1021/bi00403a017
W Schroth A Ender B Schierwater (2005) ArticleTitleMolecular biomarkers and adaptation to environmental stress in moon jelly (Aurelia spp.) Mar Biotechnol (NY) 7 449–461 Occurrence Handle10.1007/s10126-004-4095-9
JA Tainer ED Getzoff KM Beem JS Richardson DC Richardson (1982) ArticleTitleDetermination and analysis of the 2 A-structure of copper, zinc superoxide dismutase J Mol Biol 160 181–217 Occurrence Handle10.1016/0022-2836(82)90174-7
C Vismara VV Battista G Vailati R Bacchetta (2000) ArticleTitleParaquat induced embryotoxicity on Xenopus laevis development Aquat Toxicol 49 171–179 Occurrence Handle10.1016/S0166-445X(99)00080-6
C Vismara G Vailati R Bacchetta (2001) ArticleTitleReduction in paraquat embryotoxicity by ascorbic acid in Xenopus laevis Aquat Toxicol 51 293–303 Occurrence Handle10.1016/S0166-445X(00)00120-X
HY Yoo SS Kim HM Rho (1999) ArticleTitleOverexpression and simple purification of human superoxide dismutase (SOD1) in yeast and its resistance to oxidative stress J Biotechnol 68 29–35 Occurrence Handle10.1016/S0168-1656(98)00188-6
HD Youn EJ Kim JH Roe YC Hah SO Kang (1996) ArticleTitleA novel nickel-containing superoxide dismutase from Streptomyces spp Biochem J 318 889–896
Acknowledgments
This work was supported by the National Science Council of the Republic of China under grant NSC 92-2313-B-019-023 and NSC 93-2313-B-018-003 to C-F. Ken. We thank Dr. Nady Shaw for providing information on I-Mutant 2.0.
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Chuian-Fu Ken and Chi-Tsai Lin contributed equally to this article.
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Ken, CF., Lin, CT., Wen, YD. et al. Replacement of Buried Cysteine from Zebrafish Cu/Zn Superoxide Dismutase and Enhancement of Its Stability via Site-Directed Mutagenesis. Mar Biotechnol 9, 335–342 (2007). https://doi.org/10.1007/s10126-006-0143-y
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DOI: https://doi.org/10.1007/s10126-006-0143-y