Skip to main content
Log in

Cytological and molecular characterization of Vicia esdraelonensis Warb. & Eig: a rare taxon

  • Published:
Protoplasma Aims and scope Submit manuscript

Summary.

Vicia esdraelonensis, a rare taxon belonging to section Hypechusa of subgenus Vicia, was recovered and analyzed by cytological, karyological, and molecular methods, with the aim of both characterizing this species and furthering our knowledge of the phylogeny of subgenus Vicia. Automated karyotype analysis, nuclear DNA content, and chromatin organization were determined by the Feulgen reaction, as well as chromosome banding after double staining with 4′,6-diamidino-2-phenylindole (DAPI) and chromomycin A3. The chromosome number and the nuclear DNA content were in agreement with the values of the species of section Hypechusa. The GC- and AT-rich preferential sites were determined by chromomycin A3 and DAPI staining. Karyomorphological parameters indicated that V. esdraelonensis is in an intermediate position in the spatial representation of the species of section Hypechusa on the basis of symmetry indices, as well as in the dendrogram of linkage distance constructed on 37 chromosome parameters. Molecular data based on internal transcribed spacer sequences show that V. esdraelonensis can doubtlessly be included in section Hypechusa and document its closeness to V. noeana. A cladistic analysis combining the molecular data set with karyological characters is also reported. Karyological, cytological, and molecular data allow characterization of the V. esdraelonensis genome and provide information about the phylogenetic position of this species within the Hyrcanicae series of section Hypechusa.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • MA Barros JL Patton (1985) ArticleTitleGenome evolution in pocket gophers (genus Thomomys). III. Fluorochrome-revealed heterochromatin heterogeneity Chromosoma 92 337–343 Occurrence Handle4053789 Occurrence Handle10.1007/BF00327464 Occurrence Handle1:STN:280:DyaL28%2FivFKjsg%3D%3D

    Article  PubMed  CAS  Google Scholar 

  • JL Bella J Gosalvez (1991) ArticleTitleC-Banding with specific fluorescent DNA-ligands: a new approach to constitutive heterochromatin heterogeneity Biotech Histochem 1 44–52 Occurrence Handle1716159 Occurrence Handle1:STN:280:DyaK3MzmtlCksA%3D%3D

    PubMed  CAS  Google Scholar 

  • P Caputo M Frediani G Venora C Ravalli M Ambrosio R Cremonini (2006) ArticleTitleNuclear DNA contents, rDNAs and karyotype evolution in subgenus Vicia. III. The heterogeneous section Hypechusa Protoplasma 228 167–177 Occurrence Handle16838079 Occurrence Handle10.1007/s00709-006-0158-2 Occurrence Handle1:CAS:528:DC%2BD28Xps1OrtLc%3D

    Article  PubMed  CAS  Google Scholar 

  • M Ceccarelli S Minelli F Maggini PG Cionini (1995) ArticleTitleGenome size variation in Vicia faba Heredity 74 180–187 Occurrence Handle1:CAS:528:DyaK2MXltlGjsr8%3D

    CAS  Google Scholar 

  • R Cremonini S Funari S Mazzuca (1992) ArticleTitleCytology of Vicia species. I. Nuclear structure and DNA content Chromatin 1 19–26 Occurrence Handle1:CAS:528:DyaK38XmsVylsrY%3D

    CAS  Google Scholar 

  • R Cremonini M Ruffini Castiglione VG Grif VV Kotseruba EO Punina AV Rodionov OV Muravenko KV Popov TE Samatadze AV Zelenin (2003) ArticleTitleChromosome banding and DNA methylation patterns, chromatin organisation and nuclear DNA content in Zingeria biebersteiniana Biol Plant 64 543–550 Occurrence Handle10.1023/A:1024863511570

    Article  Google Scholar 

  • J Felsenstein (1985) ArticleTitleConfidence limits on phylogenies: an approach using the bootstrap Evolution 39 783–791 Occurrence Handle10.2307/2408678

    Article  Google Scholar 

  • RB Flavell (1980) ArticleTitleThe molecular characterization and organization of plant chromosomal sequences Annu Rev Plant Physiol 31 569–596 Occurrence Handle10.1146/annurev.pp.31.060180.003033 Occurrence Handle1:CAS:528:DyaL3cXksVWntbk%3D

    Article  CAS  Google Scholar 

  • M Frediani O Sassoli R Cremonini (1992) ArticleTitleNuclear DNA characterization of two species of Vicia: V. bithynica and V. narbonensis Biol Plant 34 338–344 Occurrence Handle10.1007/BF02925895

    Article  Google Scholar 

  • M Frediani P Caputo G Venora C Ravalli M Ambrosio R Cremonini (2005) ArticleTitleNuclear DNA contents, rDNAs, and karyotype evolution in Vicia subgenus Vicia: II. Section Peregrinae Protoplasma 226 181–190 Occurrence Handle16244807 Occurrence Handle10.1007/s00709-005-0114-6 Occurrence Handle1:CAS:528:DC%2BD2MXht1yktbzO

    Article  PubMed  CAS  Google Scholar 

  • P Goloboff (1999) Nona SeriesTitleInstruction manual Published by the author, S. M. de Tucumán Argentina

    Google Scholar 

  • P Goloboff JS Farris K Nixon (2003) TNT (tree analysis using new technology), version 1.0 Published by the authors, Tucumán Argentina

    Google Scholar 

  • J Greilhuber F Speta (1976) ArticleTitleC-banded karyotypes in the Scilla hohenacheri group: S. persica and puschkinia (Liliaceae) Plant Syst Evol 126 149–188 Occurrence Handle10.1007/BF00981669

    Article  Google Scholar 

  • M Guerra (2000) ArticleTitlePattern of heterochromatin distribution in plant chromosomes Genet Mol Biol 23 1029–1041

    Google Scholar 

  • TA Hall (1999) ArticleTitleBioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT Nucleic Acids Symp Ser 41 95–98 Occurrence Handle1:CAS:528:DC%2BD3cXhtVyjs7Y%3D

    CAS  Google Scholar 

  • Y Huziwara (1962) ArticleTitleKaryotype analysis in some genera of Compositae VIII: further studies on the chromosomes of Aster Am J Bot 49 116–119 Occurrence Handle10.2307/2439026

    Article  Google Scholar 

  • ILDIS (1999) International legume database and information service. http://www.ildis.org/

  • V Jaaska (1997) ArticleTitleIsoenzyme diversity and phylogenetic affinities in Vicia subgenus Vicia (Fabaceae) Genet Res Crop Evol 44 557–574 Occurrence Handle10.1023/A:1008630003045

    Article  Google Scholar 

  • FK Kupicha (1976) ArticleTitleThe infrageneric structure of Vicia Not R Bot Gard Edinb 34 278–326

    Google Scholar 

  • H Leth V Jaaska (2002) ArticleTitleCladistic and phenetic analysis of relationships in Vicia subgenus Vicia by morphology and isozymes Plant Syst Evol 232 237–260 Occurrence Handle10.1007/s006060200045

    Article  Google Scholar 

  • A Levan K Freda AA Sandberg (1964) ArticleTitleNomenclature for centromeric position of chromosomes Hereditas 52 201–220 Occurrence Handle10.1111/j.1601-5223.1964.tb01953.x

    Article  Google Scholar 

  • N Maxted (1993) ArticleTitleA phenetic investigation of Vicia L. subgenus Vicia (Leguminosae, Vicieae) Bot J Linn Soc 111 155–182 Occurrence Handle10.1006/bojl.1993.1013

    Article  Google Scholar 

  • N Maxted (1994) ArticleTitleA phenetic investigation on Vicia section Peregrinae Kupicha (Leguminosae, Papilionoideae, Viciae) Edinb J Bot 51 75–97 Occurrence Handle10.1017/S0960428600001736

    Article  Google Scholar 

  • N Maxted (1995) An ecogeographical study of Vicia subgenus Vicia SeriesTitleSystematic and ecogeographic studies on crop genepools NumberInSeries8 International Plant Genetic Resources Institute Rome

    Google Scholar 

  • N Maxted C Douglas (1997) ArticleTitleA phenetic investigation of Vicia section Hypechusa (Alef.) Aschers. & Graebner (Leguminosae, Papilionideae, Vicieae) Lagascalia 19 345–370

    Google Scholar 

  • Nixon KC (1999) Winclada (beta) ver. 0.9.9. Published by the author, Ithaca, New York, USA

  • ML Pardue JG Gall (1970) ArticleTitleChromosomal location of mouse satellite DNA Science 168 1356–1358 Occurrence Handle5462793 Occurrence Handle10.1126/science.168.3937.1356 Occurrence Handle1:CAS:528:DyaE3cXksFemtbk%3D

    Article  PubMed  CAS  Google Scholar 

  • EK Potokina N Tomooka DA Vaughan T Alexandrova RQ Xu (1999) ArticleTitlePhylogeny of Vicia subgenus Vicia (Fabaceae) based on analysis of RAPDs and RFLP of PCR amplified chloroplast genes Genet Res Crop Evol 46 149–161 Occurrence Handle10.1023/A:1008640322198

    Article  Google Scholar 

  • M Schmid T Haaf C Steinlein I Nanda M Mahony (2002) ArticleTitleChromosome banding in amphibia XXV. Karyotype evolution and heterochromatin characterization in Australian Mixophyes (Anura, Myobatrachidae) Cytogenet Genome Res 97 239–253 Occurrence Handle12438719 Occurrence Handle10.1159/000066614 Occurrence Handle1:CAS:528:DC%2BD38XovVeisro%3D

    Article  PubMed  CAS  Google Scholar 

  • D Schweizer (1976) ArticleTitleReverse fluorescent chromosome banding with chromomycin and DAPI Chromosoma 58 307–324 Occurrence Handle137107 Occurrence Handle10.1007/BF00292840 Occurrence Handle1:STN:280:DyaE2s%2FmvVWitQ%3D%3D

    Article  PubMed  CAS  Google Scholar 

  • AJ Scott M Knott (1974) ArticleTitleA cluster method for grouping means in the analysis of variance Biometrics 30 505–512 Occurrence Handle10.2307/2529204

    Article  Google Scholar 

  • JG Seijo A Fernandez (2003) ArticleTitleKaryotype analysis and chromosome evolution in South American species of Lathyrus (Leguminosae) Am J Bot 90 980–987

    Google Scholar 

  • A Stancus J Goodisman C Dabrowiak (1992) ArticleTitleQuantitative footprinting analysis of the chromomycin A3–DNA interaction Biochemistry 31 9310–9318 Occurrence Handle10.1021/bi00153a026

    Article  Google Scholar 

  • L Stebbins (1971) Chromosomal evolution in higher plants Edward Arnold London

    Google Scholar 

  • AT Sumner (1990) Chromosome banding Unwin Hyman London

    Google Scholar 

  • JD Thompson DG Higgins TJ Gibson (1994) ArticleTitleCLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice Nucleic Acids Res 22 4673–4680 Occurrence Handle7984417 Occurrence Handle10.1093/nar/22.22.4673 Occurrence Handle1:CAS:528:DyaK2MXitlSgu74%3D

    Article  PubMed  CAS  Google Scholar 

  • G Venora C Conicella A Errico F Saccardo (1991) ArticleTitleKaryotyping in plant by an image analysis system J Genet Breed 45 233–240

    Google Scholar 

  • G Venora S Blangiforti M Frediani F Maggini MT Gelati M Ruffini Castiglione R Cremonini (2000) ArticleTitleNuclear DNA contents, rDNAs, chromatin organization and karyotype evolution in Vicia sect. faba Protoplasma 213 118–125 Occurrence Handle10.1007/BF01280512 Occurrence Handle1:CAS:528:DC%2BD3cXotVOhsrY%3D

    Article  CAS  Google Scholar 

  • G Venora S Blangiforti M Ruffini Castiglione D Pignone S Losavio R Cremonini (2002) ArticleTitleChromatin organization and computer aided karyotyping of Triticum durum Desf. cv Timilia Caryologia 55 91–98

    Google Scholar 

  • CG Vosa (1970) ArticleTitleHeterochromatin recognition with fluorochromes Chromosoma 30 366–372 Occurrence Handle10.1007/BF00321068

    Article  Google Scholar 

  • AV Zelenin AI Poletaev NG Stepanova (1987) ArticleTitleFluorescence cytochemistry of nucleic acids: current state and prospects (to the 35th anniversary of the method) Tsitologiya 29 1323–1336 Occurrence Handle1:CAS:528:DyaL1cXlt1WltA%3D%3D

    CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to R. Cremonini.

Additional information

Correspondence and reprints: Dipartimento di Biologia, Università di Pisa, Via L. Ghini 5, 56126 Pisa, Italy.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Ruffini Castiglione, M., Frediani, M., Gelati, M. et al. Cytological and molecular characterization of Vicia esdraelonensis Warb. & Eig: a rare taxon. Protoplasma 231, 151–159 (2007). https://doi.org/10.1007/s00709-007-0256-9

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00709-007-0256-9

Navigation