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Intracellular fluorometric determination of microRNA-21 by using a switch-on nanoprobe composed of carbon nanotubes and gold nanoclusters

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Abstract

A sensitive and rapid fluorometric “switch on” assay is described for the detection of microRNA-21. It is based on the use of a fluorescence resonance energy transfer pair consisting of lysozyme-modified gold nanoclusters (Lys-Au NCs) and carbon nanotubes (CNTs). The Lys-Au NCs can be synthesized by a microwave-assisted technique within 2.5 min. They were modified with the ss-DNA probe (a 22-mer) for microRNA-21. Once the ss-DNA associates with the CNTs due to π stacking, the orange-red fluorescence (with excitation/emission peaks at 500/610 nm) is quenched. Nevertheless, the quenched fluorescence can be recovered after addition of microRNA-21 because of the stronger affnity between ss-DNA and microRNA-21. On the basis of the fluorescence recovery at 610 nm caused by microRNA-21, the latter can be quantified in the 0.01 to 100 nM concentration range, with a 36 pM detection limit. The method was applied to the determination of microRNA-21 in spiked serum with recoveries ranging from 98.6% to 110.0%. It also enables normal and cancer cells to be differentiated by direct imaging of intracellular microRNA-21.

A sensitive “switch on” FRET-based fluorometric assay for microRNA-21 is described. It is based on the use of  lysozyme-modified gold nanoclusters (Lys-Au NCs) and carbon nanotubes (CNTs) as energy donor and energy acceptor, respectively.

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References

  1. Yi JT, Chen TT, Huo J (2017) Nanoscale Zeolitic Imidazolate Framework-8 for Ratiometric fluorescence imaging of MicroRNA in living cells. Anal Chem 89:12351–12359

    Article  CAS  Google Scholar 

  2. Dong H, Lei J, Ding L, Wen Y, Ju H, Zhang X (2013) MicroRNA: function, detection, and bioanalysis. Chem Rev 113:6207–6233

    Article  CAS  Google Scholar 

  3. Wang JL, Huang J, Quan K, Li J, Wu YN, Wei QM, Yang XH, Wang KM (2018) Hairpin-fuelled catalytic nanobeacons for amplified microRNA imaging in live cells. Chem Commun 6:259–269

    Google Scholar 

  4. Wang P, Jing F, Li G, Wu Z, Cheng Z, Zhang J, Zhang H, Jia C, Jin Q, Mao H (2015) Absolute quantification of lung Cancer related MicroRNA by droplet digital PCR. Biosens Bioelectron 74:836–842

    Article  CAS  Google Scholar 

  5. Hunt EA, Broyles D, Head T, Deo SK (2015) MicroRNA detection: current technology and research strategies. Annu Rev Anal Chem 8:217–237

    Article  CAS  Google Scholar 

  6. Karmakar S, Hrdlicka PJ (2013) DNA strands with alternating incorporations of LNA and 2’-O-(pyren-1-yl)methyluridine: SNP-discriminating RNA detection probes. Chem Sci 4:3447–3454

    Article  CAS  Google Scholar 

  7. Sun JD, Pi FW, Ji J, Lei HT, Gao ZX, Zhang YZ, Habimana JD, Li ZJ, Sun XL (2018) Ultrasensitive “FRET-SEF” probe for sensing and imaging MicroRNAs in living cells based on gold Nanoconjugates. Anal Chem 90:3099–3108

    Article  CAS  Google Scholar 

  8. Xu SH, Liu PP, Song QW, Wang L, Luo XL (2015) One-pot synthesis of biofunctional and near-infrared fluorescent gold nanodots and their application in Pb2+ sensing and tumor cell imaging. RSC Adv 5:3152–3156

    Article  CAS  Google Scholar 

  9. Xu SH, Lu X, Yao CX, Huang F, Jiang H, Hua WH, Na N, Liu HY (2014) A visual sensor array for pattern recognition analysis of proteins using novel blue-emitting fluorescent gold nanoclusters. Anal Chem 86:11634–11639

    Article  CAS  Google Scholar 

  10. Chen W, Chen S (2009) Oxygen electroreduction catalyzed by gold nanoclusters: strong core size effects. Angew Chem Int Ed 48:4386–4389

    Article  CAS  Google Scholar 

  11. Song W, Wang Y, Liang RP, Zhang L, Qiu JD (2015) Label-free fluorescence assay for protein kinase based on peptide biomineralized gold nanoclusters as signal sensing probe. Biosens Bioelectron 64:234–240

    Article  CAS  Google Scholar 

  12. Wang YH, Jiang K, Zhu JL, Zhang L, Lin HW (2015) A FRET-based carbon dot-MnO2 nanosheet architecture for glutathione sensing in human whole blood samples. Chem Commun 51:12748–12751

    Article  CAS  Google Scholar 

  13. Yu P, Wen XM, Toh Y, Lee Y, Huang K, Huang SJ, Shrestha S, Conibeer G, Tang J (2014) Efficient electron transfer in carbon nanodot-graphene oxide nanocomposites. J Mater Chem C 2:2894–2901

    Article  CAS  Google Scholar 

  14. Buffat PA, Flueli M, Spycher R, Stadelmann P, Borel JP (1991) Crystallographic structure of small gold particles studied by high-resolution electron microscopy. Faraday Discuss 92:173–182

    Article  CAS  Google Scholar 

  15. Shang L, Azadfar N, Stockmar F, Send W, Trouillet V, Bruns M, Gerthsen D, Nienhaus GU (2011) One-pot synthesis of near-infrared fluorescent gold clusters for cellular fluorescence lifetime imaging. Small 7:2614–2620

    Article  CAS  Google Scholar 

  16. Liang MJ, Chen YL, Zhang HJ, Niu XY, Xu LF, Ren CL, Chen XG (2015) Fluorescence resonance energy transfer-based ratiometric fluorescent assay for highly sensitive and selective determination of sulfide anions. Analyst 140:6711–6719

    Article  CAS  Google Scholar 

  17. Zhuang M, Ding C, Zhu A, Tian Y (2014) Ratiometric fluorescence probe for monitoring hydroxyl radical in live cells based on gold nanoclusters. Anal Chem 86:1829–1836

    Article  CAS  Google Scholar 

  18. Zhen SJ, Xiao X, Li CH, Huang CZ (2017) An enzyme-free DNA circuit-assisted graphene oxide enhanced fluorescence anisotropy assay for MicroRNA detection with improved sensitivity and selectivity. Anal Chem 89:8766–8771

    Article  CAS  Google Scholar 

  19. Wang G, Fu YK, Ren ZH, Huang J, Best S, Li X, Han GR (2018) Upconversion nanocrystal ‘armoured’ silica fibres with superior photoluminescence for microRNA detection. Chem Commun 54:6324–6327

    Article  CAS  Google Scholar 

  20. Deng K, Zhang Y, Tong XD (2018) Sensitive electrochemical detection of microRNA-21 based on propylamine-functionalized mesoporous silica with glucometer readout. Anal Bioanal Chem 410:1863–1871

    Article  CAS  Google Scholar 

  21. Yao MD, Lv XF, Deng YL, Rasheed M (2019) Specific and simultaneous detection of micro RNA 21 and let-7a by rolling circle amplification combined with lateral flow strip. Anal Chim Acta 1055:115–125. https://doi.org/10.1016/j.aca.2018.12.040

    Article  CAS  PubMed  Google Scholar 

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Acknowledgments

The authors gratefully acknowledge the support from the National Nature Science Foundation of China (21505081, 21675093), the Natural Science Foundation of Shandong Province of China (ZR2019YQ13) and the Taishan Scholar Program of Shandong Province, China (ts20110829).

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Correspondence to Shenghao Xu or Xiliang Luo.

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Liu, Y., Jiang, L., Fan, X. et al. Intracellular fluorometric determination of microRNA-21 by using a switch-on nanoprobe composed of carbon nanotubes and gold nanoclusters. Microchim Acta 186, 447 (2019). https://doi.org/10.1007/s00604-019-3573-8

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