Abstract
Coat protein I (COPI) and Coat protein II (COPII) coated vesicles mediate protein transport in the early secretory pathway. Although several components of COPII vesicles have been shown to have an essential role in Arabidopsis gametogenesis, the function of COPI components in gametogenesis has not been studied in detail. COPI consists of a heptameric complex made of α, β, β′, γ, δ, ɛ, and ζ-COP subunits and most subunits have several isoforms in Arabidopsis. We have found that two isoforms of the β’-COP subunit, β’1-COP and β’2-COP, are required for female and male gametophyte development. Reciprocal crosses between wild type plants and plants heterozygous for T-DNA insertions in β’1-COP and β’2-COP showed that β’1β’2-cop gametophytes are not transmitted.
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Introduction
The biosynthetic secretory pathway transports newly synthesized proteins and lipids from the endoplasmic reticulum (ER) to the plasma membrane and/or the extracellular space. Transport along the early secretory pathway (ER-Golgi) is mediated by vesicles coated by Coat Protein complexes (COPs). Anterograde (ER to Golgi) transport is mediated by COPII vesicles while retrograde (Golgi to ER) and/or intra-Golgi transport (either in the cis–trans and/or trans/cis direction) is mediated by COPI vesicles (Aniento et al. 2022; Pereira and Di Sansebastiano 2021). The COPII complex consists of five proteins that have different paralogs: the GTPase secretion-associated Ras-related protein Sar1A-E, SEC23A-G, SEC24A-C, SEC13A-B and SEC31A-B (Chung et al. 2016). The main component of the COPI coat is the coatomer complex, which is composed of seven subunits (α/β/β'/γ/δ/ε/ζ), which interact with Golgi membranes via the GTPase ADP-ribosylation factor 1 (ARF1) (Aniento et al. 2022). The coatomer complex is not only involved in the biogenesis of COPI vesicles but it is also required to select the cargo to be included in the vesicles. Conceptually (and biochemically), subunits of the coatomer complex can be grouped into two subcomplexes, an outer (α/β′/ε) subcomplex and an inner (β/δ/γ/ζ) subcomplex, although subunits from both subcomplexes appear to be involved in cargo recognition (including α-, β´-, γ- and δ-COP) (Aniento et al. 2022). In mammals, γ-COP and ζ-COP subunits have two isoforms, in contrast to yeast, that contains only one isoform for every subunit (Gao et al. 2014). Although COPI vesicles formed in vitro with different COPI subunit isoforms had the same protein composition (Adolf et al. 2019), it was postulated that different populations of COPI vesicles (perhaps with different cargo proteins) could be formed by different isoforms of the γ- and ζ-COP subunits (Popoff et al. 2011). Indeed, γ1-COP and not γ2-COP has been shown recently to specifically promote neurite outgrowth (Jain Goyal et al. 2020). The plant COPI complex has been found to play specific roles in growth and development, cell plate formation during cytokinesis and Golgi morphology (Ahn et al. 2015; Woo et al. 2015; Gimeno-Ferrer et al. 2017; Sánchez-Simarro et al. 2020). In Arabidopsis, most COPI genes (including α-, β-, β’, ε- and ζ-COP) have 2–3 paralogs and it is not yet known whether different COPI subunit isoforms may have specific functions or else are functionally redundant (Gao et al. 2014). Interestingly, two morphologically different types of COPI vesicles have been identified in Arabidopsis (Donohoe et al. 2007), which might be formed by different COPI subunit isoforms, although this postulate needs to be confirmed.
Plant reproduction is one of the most fundamental plant processes. It is not only essential to perpetuate plant species and for plant evolution, but also important for crop production and agriculture economy. It has been reported that factors involved in vesicular trafficking play a key role in plant gametophyte development (El-Kasmi et al. 2011; Liu F et al. 2021; Rojek et al. 2021; Zhou et al. 2022). Several COPII components (SEC24A-C and SEC31A-B) have been shown to have an essential role in Arabidopsis gametogenesis. A SEC24A loss of function mutation caused defects in pollen leading to failure of male transmission of the SEC24A mutation (Conger et al. 2011) and a significant decrease of SEC24B and SEC24C expression affected male and female gametogenesis (Tanaka et al. 2013). Similarly, a sec31Asec31B double mutant was unavailable due to the lethality of male and female sec31Asec31B gametophytes (Liu X et al. 2021).
Concerning components of the COPI coat, very little is known about their role in reproduction. COPI-mediated membrane trafficking has been postulated to play a role in cytokinesis in Drosophila male meiotic divisions (Kitazawa et al. 2012) and mammalian spermatogenesis (Moreno et al. 2000). In plants, it has been shown that Arabidopsis COPI subunit isoforms are required for the acceptance of compatible pollen (Cabada Gomez et al. 2020). Individual anthers from flowers of Col-0 wild-type or knockout lines of isoforms of the α-COP, γ-COP, and ε-COP subunits were used to manually apply pollen grains to the stigmas of the emasculated flowers. Altered compatible pollen grain adherence and tube germination and reduced seed set was observed in α1-cop, whereas the other lines had milder phenotypes but visibly retarded compatible pollen acceptance (Cabada Gomez et al. 2020). However, no more data are available yet about the involvement of COPI function in plant reproductive processes. Recently, we have shown that the three genes (β’1–3-COP) that encode the three Arabidopsis β’-COP isoforms are at least partially redundant as none of the loss-of-function single mutants of these genes display severe developmental defects under standard growth conditions (Sánchez-Simarro et al. 2022). β’-COP double mutant analysis showed that β’2-COP (At3g15980) cannot compensate for the simultaneous loss of β’1-COP (At1g52360) and β’3-COP (At1g79990) since the β’1β’3-cop double mutant failed to develop beyond the seedling stage. However, β’2β’3-cop double mutants have no major phenotypic alterations under standard growth conditions, indicating that β’1-COP does seem to compensate for the simultaneous lack of β’2-COP and β’3-COP. Finally, β’3-COP cannot compensate for the simultaneous loss of β’1-COP and β’2-COP as no β’1β’2-cop double mutants could be obtained (Sánchez-Simarro et al. 2022). In this study we decided to explore whether the simultaneous loss of function of β’1-COP and β’2-COP was gametophytically lethal. We found that β’1β’2-cop female and male gametophytes are not transmitted to the progeny.
Materials and methods
Plant material
Arabidopsis thaliana (ecotype Col-0) was used as wild type. The loss-of-function mutants β’1-cop-1 (SALK_206753) and β’2-cop-1 (SALK_056771) were from the Salk Institute Genomic Analysis Laboratory and obtained from the Nottingham Arabidopsis Stock Centre. A. thaliana plants were grown in growth chambers under a 16-h-light:8-h-dark regime at 22 °C. The progeny of the different crosses was characterized by PCR (Sánchez-Simarro et al. 2022).
Silique clearance
Mature siliques were cleared with 0.2N NaOH and 1% SDS solution. Measurements of the seeds and siliques were made using the ImageJ software.
Statistical analysis
Differences in silique length, seed number and seed set, between wild type and β’1+/─ β’2─/─, were tested using a two-sample t-test with unequal variances (Microsoft Excel 2013).
Results and discussion
Arabidopsis β’-COP genes are widely expressed (Sánchez-Simarro et al. 2022). Data from microarray experiments obtained from public databases such as Genevestigator (www.genevestigator.com; Zimmermann et al. 2004) showed medium–high levels of expression of the three genes in female and male reproductive tissues (Fig. 1).
Expression patterns of β’1-COP, β’2-COP and β’3-COP in reproductive tissues. Data obtained by GENEVESTIGATOR. The number of samples aggregated in each category to calculate this average is indicated on the right. HIGH”, “MEDIUM” and “LOW” expressions are determined by looking at all expression values of all genes over all samples (www.genevestigator.com, accessed on 24 November 2022)
We have previously characterized single and double β’-COP mutants (Sánchez-Simarro et al. 2022). To obtain the double mutants, reciprocal crosses in both directions were performed with the single mutants (Sánchez-Simarro et al. 2022). Under standard growth conditions, β’1β’3-cop double mutants display developmental defects and β’2β’3-cop double mutants showed a wild type phenotype. However, no homozygous double mutants were obtained when β’1-cop-1 and β’2-cop-1 plants were crossed (Sánchez-Simarro et al. 2022). In this study, we analyzed the progeny segregation in detail. We screened 100 F2 plants and the results are summarized in Table 1. Not only β’1─/─ β’2 ─ /─ plants were not found but neither trans-heterozygous β’1+/─ β’2─/─ and β’1─/─ β’2+/─ plants could be identified, suggesting that β’1β’2-cop gametophytes may not be transmitted
.
We observed that the siliques of β’1+/─ β’2+/─ plants were shorter than wild type and they have a reduced seed number (Fig. 2). In addition, they had a reduced seed set when compared to wild type (Fig. 2). These results support our conclusion that the presence of both β’1-COP and β’2-COP is required for gametogenesis.
Silique length, seed set and seed number in β’1+/─ β’2+/─. Top panel: statistical analysis of the silique length, seed setting rate and seed number in wild type (Col-0) and β’1+/─ β’2+/─. The boxes display the interquartile range and the thick line shows the median. Whiskers of the box plots display the maximum and minimum values. n ≥ 100. Significance by Student's t-test: ***, P-value < 0.001. Bottom panel: representative photographs of siliques of the wild type (Col-0) and β’1+/─ β’2+/─mutant. Scale bars = 1 mm
To investigate the gametophyte specificity for the defect of β’1β’2-cop co-transmission, reciprocal crosses of the double heterozygous β’1+/─ β’2+/─ with wild type were performed. When β’1+/─ β’2+/─ was used as the male parent and wild type as the female parent, no β’1+/─ β’2+/─ plants were obtained from the F1 generation (Table 2). Similarly, when wild type was used as the male parent and β’1+/─ β’2+/─ as the female parent, no β’1+/─ β’2+/─ plants were found (Table 2). These results indicate that male and female β’1β’2-cop gametophytes could not be transmitted.
Therefore, this work indicates that COPI vesicle trafficking is crucial for Arabidopsis gametogenesis. This work also reinforces the hypothesis that Arabidopsis COPI subunit isoforms may have both redundant and non-redundant functions. While β’1- and β’2-COP seem to have at least partially redundant functions in gametogenesis (each one can substitute the other one), β’3-COP cannot replace the absence of both β’1- and β’2-COP. In addition, previous studies showing altered pollen–pistil interaction phenotypes of α1-cop mutants might be explained by α1-COP playing a more predominant role than α2-COP in gametophyte development (Cabada Gomez et al. 2020). Future experiments should investigate whether different COPI subunit isoforms may be part of different vesicle populations (Donohoe et al. 2007) with specific functions in different physiological processes.
Author’s contribution statements
JSS, FA and MJM conceived and designed research. JSS conducted experiments. MJM and FA wrote the manuscript. All authors read and approved the manuscript. The authors declare that their results have not been submitted for publication elsewhere. All co-authors agree to share equal responsibility for the content of the manuscript.
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Acknowledgements
We thank the Salk Institute Genomic Analysis Laboratory for providing the sequence-indexed Arabidopsis T-DNA insertion mutants and Dr Alejandro Ferrando and Dr Eugenio Gómez-Minguet for critical reading of the manuscript. F.A. and M.J.M. were supported by Ministerio de Economía y Competitividad (Grant No. BFU2016-76607P), Ministerio de Ciencia e Innovación, MCIN/AEI/https://doi.org/10.13039/501100011033 (Grant No. PID2020-113847GB-I00) and Generalitat Valenciana (AICO/2020/187). J.S.-S. was a recipient of one fellowship from Ministerio de Ciencia, Innovacion y Universidades (FPU program) and one short-term fellowship from Ministerio de Ciencia, Innovación y Universidades.
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Communicated by Weicai Yang.
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Sánchez-Simarro, J., Aniento, F. & Marcote, M.J. The presence of β’1-COP and β’2-COP is required for female and male gametophyte development. Plant Reprod 36, 343–347 (2023). https://doi.org/10.1007/s00497-023-00467-6
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DOI: https://doi.org/10.1007/s00497-023-00467-6