Skip to main content
Log in

Stochastic reconstruction of spatial data using LLE and MPS

  • Original Paper
  • Published:
Stochastic Environmental Research and Risk Assessment Aims and scope Submit manuscript

Abstract

Spatial data are widely used in many scientific and engineering fields, such as remote sensing, environment monitoring, weather forecast and mineral exploitation. However, direct measurements of such spatial data sometimes are difficult to achieve due to the expensive cost of equipment or current limited technology, so stochastic reconstruction or simulation of spatial data are necessary based on the principles of statistics. As a typical statistical modeling method, multiple-point statistics (MPS) has been successfully used for stochastic reconstruction by reproducing the features from training images (TIs) to the reconstructed regions. However, because these features mostly have intrinsic nonlinear relations, the traditional MPS methods using linear dimensionality reduction are not suitable to deal with the nonlinear situation. In this paper a new method using locally linear embedding (LLE) and MPS is proposed to resolve this issue. As a classical nonlinear method of dimensionality reduction in manifold learning, LLE is combined with MPS to reduce redundant data of TIs so that the subsequent reconstruction can be faster and more accurate. The tests are performed in both 2D and 3D reconstructions, showing that the reconstructions can reproduce the structural features of TIs and the proposed method has its advantages in reconstruction speed and quality over typical methods using linear dimensionality reduction.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6
Fig. 7
Fig. 8
Fig. 9
Fig. 10
Fig. 11
Fig. 12
Fig. 13
Fig. 14
Fig. 15
Fig. 16
Fig. 17
Fig. 18

Similar content being viewed by others

References

  • Arpat GB, Caers J (2007) Conditional simulation with patterns. Math Geol 39(2):177–203

    Article  Google Scholar 

  • Bezdek JC (1974) Numerical taxonomy with fuzzy set. J of Math Biol 1(1):57–71

    Article  Google Scholar 

  • Bierkens M (2006) Designing a monitoring network for detecting groundwater pollution with stochastic simulation and a cost model. Stoch Env Res Risk Assess 20(5):335–351

    Article  Google Scholar 

  • Cheng K, Hou J, Liou J, Wu Y, Chiang J (2011) Stochastic simulation of bivariate gamma distribution: a frequency-factor based approach. Stoch Env Res Risk Assess 25(2):107–122

    Article  Google Scholar 

  • Cheon YJ, Kim DJ (2009) Natural facial expression recognition using differential-AAM and manifold learning. Pattern Recogn 42:1340–1350

    Article  Google Scholar 

  • Comunian A, Renard P, Straubhaar J (2012) 3D multiple-point statistics simulation using 2D training images. Comput Geosci 40:49–65

    Article  Google Scholar 

  • Dujardin B (2007) Sensitivity analysis of FILTERSIM and histogram reproduction. M.S. thesis, Stanford University, Stanford

  • Dunn JC (1974) Well separated clusters and optimal fuzzy partitions. J Cybern 4(1):95–104

    Article  Google Scholar 

  • Ester M, Kriegel HP, Sander J, Xu XW (1996) A density-based algorithm for discovering clusters in large spatial databases. Knowledge Discovery and Data Mining(KDD’96) AAAI Press, Menlo Park

  • Goovaerts P (1997) Geostatistics for natural resources evaluation. Oxford University Press, New York

    Google Scholar 

  • Guardiano F, Srivastava RM (1993) Multivariate geostatistics: Beyond bivariate moments. In: Soares A (ed) Geostatistics-Troia. Kluwer, Dordrecht, pp 133–144

    Chapter  Google Scholar 

  • Han Y, Xu Z, Ma Z, Huang Z (2013) Image classification with manifold learning for out-of-sample data. Sig Process 93:2169–2177

    Article  Google Scholar 

  • Honarkhah M (2011) Stochastic simulation of patterns using distance-based pattern modeling. Ph.D. Dissertation, Stanford University, Stanford

  • Honarkhah M, Caers J (2010) Stochastic simulation of patterns using distance-based pattern modeling. Math Geosci 42:487–517

    Article  Google Scholar 

  • Hubbard SS, Chen JS, Peterson J, Majer EL, Williams KH, Swift DJ, Mailloux B, Rubin Y (2001) Hydrogeological characterization of the South Oyster Bacterial Transport Site using geophysical data. Water Resour Res 37(10):2431–2456

    Article  Google Scholar 

  • Jordan DW, Smith P (2007) Nonlinear ordinary differential equations, 4th edn. Oxford University Press, New York

    Google Scholar 

  • Journel AG (1974) Geostatistics for conditional simulation of ore bodies. Econ Geol 69(5):673–687

    Article  Google Scholar 

  • Journel A, Huijbregts CJ (1978) Mining geostatistics. Academic Press, New York

    Google Scholar 

  • Kaufman L, Rousseeuw PJ (1990) Finding groups in data: an introduction to cluster analysis. John Wiley & Sons, New York

    Book  Google Scholar 

  • Ketchen DJ, Shook CL (1996) The application of cluster analysis in strategic management research: an analysis and critique. Strateg Manag J 17(6):441–458

    Article  Google Scholar 

  • Levina E, Bickel PJ (2005) Maximum likelihood estimation of intrinsic dimension. In: Proceedings of neural information processing systems (NIPS 2005), pp 777–784

  • Mariethoz G, Renard P (2010) Reconstruction of incomplete data sets or images using direct sampling. Math Geosci 42:245–268

    Article  Google Scholar 

  • Matheron G (1973) The intrinsic random functions and their applications. Adv Appl Probab 5(3):439–468

    Article  Google Scholar 

  • Orsenigo C, Vercellis C (2013) A comparative study of nonlinear manifold learning methods for cancer microarray data classification. Expert Syst Appl 40:2189–2197

    Article  Google Scholar 

  • Parra A, Ortiz JM (2011) Adapting a texture synthesis algorithm for conditional multiple point geostatistical simulation. Stoch Env Res Risk Assess 25:1101–1111

    Article  Google Scholar 

  • Peled SH, Mazumdar S (2004) On coresets for k-means and k-median clustering. In: Proceeding of the thirty-sixth annual ACM symposium on Theory of Computing, ACM, New York, pp 291–300

  • Renard P, Gómez-Hernández J, Ezzedine S (2005) Characterization of porous and fractured media. In: Encyclopedia of hydrological sciences. Wiley, New York

  • Rezaee H, Asghari O, Koneshloo M, Ortiz JM (2014) Multiple-point geostatistical simulation of dykes: application at Sungun porphyry copper system, Iran. Stoch Environ Res Risk Assess 28(7):1913–1927

    Article  Google Scholar 

  • Rezaee H, Marcotte D, Tahmasebi P, Saucier A (2015) Multiple-point geostatistical simulation using enriched pattern databases. Stoch Env Res Risk Assess 29(3):893–913

    Article  Google Scholar 

  • Rousseeuw PJ (1987) Silhouettes: a graphical aid to the interpretation and validation of cluster analysis. Comput Appl Math 20:53–65

    Article  Google Scholar 

  • Roweis S, Saul L (2000) Nonlinear dimensionality reduction by locally linear embedding. Science 290(22):2323–2326

    Article  CAS  Google Scholar 

  • Sattari TM, Apaydin H, Ozturk F (2009) Operation analysis of Eleviyan irrigation reservoir dam by optimization and stochastic simulation. Stoch Env Res Risk Assess 23(8):1187–1201

    Article  Google Scholar 

  • Shannon CE (1948) A mathematical theory of communication. Bell Syst Tech J 27:379–423

    Article  Google Scholar 

  • Strebelle SB (2000) Sequential Simulation drawing structures from training images. Ph.D. Dissertation, Stanford University, Stanford

  • Strebelle SB (2002) Conditional simulation of complex geological structures using multiple-point statistics. Math Geol 34(1):1–21

    Article  Google Scholar 

  • Tenenbaum BJ, Silva V, Langford CJ (2000) A global geometric framework for nonlinear dimensionality reduction. Science 290(22):2319–2323

    Article  CAS  Google Scholar 

  • Vladimir EC (2002) Why so many clustering algorithms—a position paper. ACM SIGKDD Explor Newslett 4:65–75

    Article  Google Scholar 

  • Wang G, Gertner GZ, Anderson AB (2004) Spatial-variability-based algorithms for scaling-up spatial data and uncertainties. IEEE Trans Geosci Remote Sens 42(9):2004–2015

    Article  Google Scholar 

  • Xie XL, Beni G (1991) A validity measure for fuzzy clustering. IEEE Trans Pattern Anal Mach Intel 13(8):841–847

    Article  Google Scholar 

  • Zhang TF (2006) Filter-based training pattern classification for spatial pattern simulation. Ph.D. Dissertation, Stanford University, Stanford

  • Zhang TF, Switzer P, Journel A (2006) Filter-based classification of training image patterns for spatial simulation. Math Geol 38:63–80

    Article  CAS  Google Scholar 

  • Zhang T, Du Y, Huang T, Li X (2015a) GPU-accelerated 3D reconstruction of porous media using multiple-point statistics. Comput Geosci 19:79–98

    Article  Google Scholar 

  • Zhang T, Du Y, Huang T, Li X (2015b) Reconstruction of porous media using multiple-point statistics with data conditioning. Stoch Env Res Risk Assess 29(3):727–738

    Article  Google Scholar 

Download references

Acknowledgments

We really appreciate the reviewers for the valuable comments and suggestions on our manuscript. This work is supported by National Program on Key Basic Research Project of China (973 Program, No. 2011CB707305), the National Science and Technology Major Project (No. 2011ZX05009-006), CAS Strategic Priority Research Program (XDB10030402), Talented People Introduction Foundation of Shanghai University of Electric Power (No. K2012-004, K2013-019, K2014-020), and the Excellent University Young Teachers Training Program of Shanghai Municipal Education Commission (ZZsdl13015).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Yi Du.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Zhang, T., Du, Y., Li, B. et al. Stochastic reconstruction of spatial data using LLE and MPS. Stoch Environ Res Risk Assess 31, 243–256 (2017). https://doi.org/10.1007/s00477-015-1197-z

Download citation

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00477-015-1197-z

Keywords

Navigation