Abstract
Purpose
To investigate the performance of deep learning and radiomics features of intra-tumoral region (ITR) and peri-tumoral region (PTR) in the diagnosing of breast cancer lung metastasis (BCLM) and primary lung cancer (PLC) with low-dose CT (LDCT).
Methods
We retrospectively collected the LDCT images of 100 breast cancer patients with lung lesions, comprising 60 cases of BCLM and 40 cases of PLC. We proposed a fusion model that combined deep learning features extracted from ResNet18-based multi-input residual convolution network with traditional radiomics features. Specifically, the fusion model adopted a multi-region strategy, incorporating the aforementioned features from both the ITR and PTR. Then, we randomly divided the dataset into training and validation sets using fivefold cross-validation approach. Comprehensive comparative experiments were performed between the proposed fusion model and other eight models, including the intra-tumoral deep learning model, the intra-tumoral radiomics model, the intra-tumoral deep-learning radiomics model, the peri-tumoral deep learning model, the peri-tumoral radiomics model, the peri-tumoral deep-learning radiomics model, the multi-region radiomics model, and the multi-region deep-learning model.
Results
The fusion model developed using deep-learning radiomics feature sets extracted from the ITR and PTR had the best classification performance, with the area under the curve of 0.913 (95% CI 0.840–0.960). This was significantly higher than that of the single region’s radiomics model or deep learning model.
Conclusions
The combination of radiomics and deep learning features was effective in discriminating BCLM and PLC. Additionally, the analysis of the PTR can mine more comprehensive tumor information.
Similar content being viewed by others
Data availability
The datasets generated during and/or analyzed during the current study are available from the corresponding author on reasonable request.
Abbreviations
- LDCT:
-
Low-dose computed tomography
- ITR:
-
Intra-tumoral region
- PTR:
-
Peri-tumoral region
- MR:
-
Two regions of the intra-tumoral region and peri-tumoral region
- BCLM:
-
Breast cancer lung metastasis
- PLC:
-
Primary lung cancer
- LASSO:
-
Least absolute shrinkage and selection operator
- LDA:
-
Linear discriminant analysis
- ROI:
-
Region of interest
- CI:
-
Confidence interval
- ICCs:
-
Intra-class correlation coefficients
- AUC:
-
Area under the curve
- HU:
-
Hounsfield unit
References
Aberle DR, Adams AM, Berg CD, Black WC, Clapp JD, Fagerstrom RM, Gareen IF, Gatsonis C, Marcus PM, Sicks JD (2011) Reduced lung-cancer mortality with low-dose computed tomographic screening. N Engl J Med 365:395–409. https://doi.org/10.1056/NEJMoa1102873
Braman NM, Etesami M, Prasanna P, Dubchuk C, Gilmore H, Tiwari P, Plecha D, Madabhushi A (2017) Intratumoral and peritumoral radiomics for the pretreatment prediction of pathological complete response to neoadjuvant chemotherapy based on breast DCE-MRI. Breast Cancer Res 19:57. https://doi.org/10.1186/s13058-017-0846-1
Cui W, Peng Y, Yuan G, Cao W, Cao Y, Lu Z, Ni X, Yan Z, Zheng J (2022) FMRNet: a fused network of multiple tumoral regions for breast tumor classification with ultrasound images. Med Phys 49:144–157. https://doi.org/10.1002/mp.15341
Gillies RJ, Kinahan PE, Hricak H (2015) Radiomics: images are more than pictures, they are data. Radiology 278:563–577. https://doi.org/10.1148/radiol.2015151169
He QH, Feng JJ, Lv FJ, Jiang Q, Xiao MZ (2023) Deep learning and radiomic feature-based blending ensemble classifier for malignancy risk prediction in cystic renal lesions. Insights Imaging 14:6. https://doi.org/10.1186/s13244-022-01349-7
He K, Zhang X, Ren S, Sun J (2016) Deep residual learning for image recognition. In: Proceedings of the IEEE Computer Society conference on computer vision and pattern recognition, pp 770–778. https://doi.org/10.1109/CVPR.2016.90
Hu Y, Xie C, Yang H, Ho JWK, Wen J, Han L, Chiu KWH, Fu J, Vardhanabhuti V (2020) Assessment of intratumoral and peritumoral computed tomography radiomics for predicting pathological complete response to neoadjuvant chemoradiation in patients with esophageal squamous cell carcinoma. JAMA Netw Open 3:e2015927. https://doi.org/10.1001/jamanetworkopen.2020.15927
Hu X, Gong J, Zhou W, Li H, Wang S, Wei M, Peng W, Gu Y (2021) Computer-aided diagnosis of ground glass pulmonary nodule by fusing deep learning and radiomics features. Phys Med Biol 66:065015. https://doi.org/10.1088/1361-6560/abe735
Hwang EJ, Lee JS, Lee JH, Lim WH, Kim JH, Choi KS, Choi TW, Kim TH, Goo JM, Park CM (2021) Deep learning for detection of pulmonary metastasis on chest radiographs. Radiology 301:455–463. https://doi.org/10.1148/radiol.2021210578
Kennecke H, Yerushalmi R, Woods R, Cheang MC, Voduc D, Speers CH, Nielsen TO, Gelmon K (2010) Metastatic behavior of breast cancer subtypes. J Clin Oncol 28:3271–3277. https://doi.org/10.1200/JCO.2009.25.9820
Kirienko M, Cozzi L, Rossi A, Voulaz E, Antunovic L, Fogliata A, Chiti A, Sollini M (2018) Ability of FDG PET and CT radiomics features to differentiate between primary and metastatic lung lesions. Eur J Nucl Med Mol Imaging 45:1649–1660. https://doi.org/10.1007/s00259-018-3987-2
Kumar V, Gu Y, Basu S, Berglund A, Eschrich SA, Schabath MB, Forster K, Aerts HJ, Dekker A, Fenstermacher D, Goldgof DB, Hall LO, Lambin P, Balagurunathan Y, Gatenby RA, R J, (2012) Radiomics: the process and the challenges. Magn Reson Imaging 30:1234–1248. https://doi.org/10.1016/j.mri.2012.06.010
Li X, Yang L, Jiao X (2022) Comparison of traditional radiomics, deep learning radiomics and fusion methods for axillary lymph node metastasis prediction in breast cancer. Acad Radiol. https://doi.org/10.1016/j.acra.2022.10.015
Li M, Gong J, Bao Y, Huang D, Peng J, Tong T (2023) Special issue “The advance of solid tumor research in China”: prognosis prediction for stage II colorectal cancer by fusing computed tomography radiomics and deep-learning features of primary lesions and peripheral lymph nodes. Int J Cancer 152:31–41. https://doi.org/10.1002/ijc.34053
Liang W, Tian W, Wang Y, Wang P, Wang Y, Zhang H, Ruan S, Shao J, Zhang X, Huang D, Ding Y, Bai X (2022) Classification prediction of pancreatic cystic neoplasms based on radiomics deep learning models. BMC Cancer 22:1237. https://doi.org/10.1186/s12885-022-10273-4
Litjens G, Kooi T, Bejnordi BE, Setio AAA, Ciompi F, Ghafoorian M, van der Laak J, van Ginneken B, Sanchez CI (2017) A survey on deep learning in medical image analysis. Med Image Anal 42:60–88. https://doi.org/10.1016/j.media.2017.07.005
Mishra AK, Roy P, Bandyopadhyay S, Das SK (2022) Feature fusion based machine learning pipeline to improve breast cancer prediction. Multimed Tools Appl 81:37627–37655. https://doi.org/10.1007/s11042-022-13498-4
Okasaka T, Usami N, Mitsudomi T, Yatabe Y, Matsuo K, Yokoi K (2008) Stepwise examination for differential diagnosis of primary lung cancer and breast cancer relapse presenting as a solitary pulmonary nodule in patients after mastectomy. J Surg Oncol 98:510–514. https://doi.org/10.1002/jso.21149
Polyak K, Haviv I, Campbell IG (2009) Co-evolution of tumor cells and their microenvironment. Trends Genet 25:30–38. https://doi.org/10.1016/j.tig.2008.10.012
Prasanna P, Patel J, Partovi S, Madabhushi A, Tiwari P (2017) Radiomic features from the peritumoral brain parenchyma on treatment-naive multi-parametric MR imaging predict long versus short-term survival in glioblastoma multiforme: preliminary findings. Eur Radiol 27:4188–4197. https://doi.org/10.1007/s00330-016-4637-3
Rena O, Papalia E, Ruffini E, Filosso PL, Oliaro A, Maggi G, Casadio C (2007) The role of surgery in the management of solitary pulmonary nodule in breast cancer patients. Eur J Surg Oncol 33:546–550. https://doi.org/10.1016/j.ejso.2006.12.015
Samei E, Rowberg A, Avraham E, Cornelius C (2004) Toward clinically relevant standardization of image quality. J Digit Imaging 17:271–278. https://doi.org/10.1007/s10278-004-1031-5
Semenza GL (2016) The hypoxic tumor microenvironment: A driving force for breast cancer progression. Biochim Biophys Acta Mol Cell Res 1863:382–391. https://doi.org/10.1016/j.bbamcr.2015.05.036
Sung H, Ferlay J, Siegel RL, Laversanne M, Soerjomataram I, Jemal A, Bray F (2021) Global cancer statistics 2020: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries. CA Cancer J Clin 71:209–249. https://doi.org/10.3322/caac.21660
Tang X, Huang H, Du P, Wang L, Yin H, Xu X (2022) Intratumoral and peritumoral CT-based radiomics strategy reveals distinct subtypes of non-small-cell lung cancer. J Cancer Res Clin Oncol 148:2247–2260. https://doi.org/10.1007/s00432-022-04015-z
Tian Y, Komolafe TE, Zheng J, Zhou G, Chen T, Zhou B, Yang X (2021) Assessing PD-L1 Expression Level via Preoperative MRI in HCC Based on Integrating Deep Learning and Radiomics Features. Diagnostics (basel). https://doi.org/10.3390/diagnostics11101875
Tibshirani R (2011) Regression shrinkage and selection via the lasso: a retrospective. J R Stat Soc Ser B Stat Methodol 73:273–282. https://doi.org/10.1111/j.1467-9868.2011.00771.x
van Griethuysen JJM, Fedorov A, Parmar C, Hosny A, Aucoin N, Narayan V, Beets-Tan RGH, Fillion-Robin JC, Pieper S, Aerts H (2017) Computational radiomics system to decode the radiographic phenotype. Cancer Res 77:e104–e107. https://doi.org/10.1158/0008-5472.CAN-17-0339
Vicini S, Bortolotto C, Rengo M, Ballerini D, Bellini D, Carbone I, Preda L, Laghi A, Coppola F, Faggioni L (2022) A narrative review on current imaging applications of artificial intelligence and radiomics in oncology: focus on the three most common cancers. Radiol Med 127:819–836. https://doi.org/10.1007/s11547-022-01512-6
Wang X, Zhao X, Li Q, Xia W, Peng Z, Zhang R, Li Q, Jian J, Wang W, Tang Y, Liu S, Gao X (2019) Can peritumoral radiomics increase the efficiency of the prediction for lymph node metastasis in clinical stage T1 lung adenocarcinoma on CT? Eur Radiol 29:6049–6058. https://doi.org/10.1007/s00330-019-06084-0
Wei W, Jia G, Wu Z, Wang T, Wang H, Wei K, Cheng C, Liu Z, Zuo C (2022) A multidomain fusion model of radiomics and deep learning to discriminate between PDAC and AIP based on 18F-FDG PET/CT images. Jpn J Radiol. https://doi.org/10.1007/s11604-022-01363-1
Wu J, Li B, Sun X, Cao G, Rubin DL, Napel S, Ikeda DM, Kurian AW, Li R (2017) Heterogeneous enhancement patterns of tumor-adjacent parenchyma at MR imaging are associated with dysregulated signaling pathways and poor survival in breast cancer. Radiology 285:401–413. https://doi.org/10.1148/radiol.2017162823
Wu G, Woodruff HC, Shen J, Refaee T, Sanduleanu S, Ibrahim A, Leijenaar RTH, Wang R, Xiong J, Bian J, Wu J, Lambin P (2020a) Diagnosis of invasive lung adenocarcinoma based on chest CT radiomic features of part-solid pulmonary nodules: a multicenter study. Radiology 297:451–458. https://doi.org/10.1148/radiol.2020192431
Wu L, Gao C, Xiang P, Zheng S, Pang P, Xu M (2020b) CT-imaging based analysis of invasive lung adenocarcinoma presenting as ground glass nodules using peri- and intra-nodular radiomic features. Front Oncol 10:838. https://doi.org/10.3389/fonc.2020.00838
Wu M, Liang Y, Zhang X (2022) Changes in pulmonary microenvironment aids lung metastasis of breast cancer. Front Oncol 12:860932. https://doi.org/10.3389/fonc.2022.860932
Xiao W, Zheng S, Liu P, Zou Y, Xie X, Yu P, Tang H, Xie X (2018) Risk factors and survival outcomes in patients with breast cancer and lung metastasis: a population-based study. Cancer Med 7:922–930. https://doi.org/10.1002/cam4.1370
Yang D, Ren G, Ni R, Huang YH, Lam NFD, Sun H, Wan SBN, Wong MFE, Chan KK, Tsang HCH, Xu L, Wu TC, Kong FS, Wang YXJ, Qin J, Chan LWC, Ying M, Cai J (2023) Deep learning attention-guided radiomics for COVID-19 chest radiograph classification. Quant Imaging Med Surg 13:572–584. https://doi.org/10.21037/qims-22-531
Zhang Q, Peng Y, Liu W, Bai J, Zheng J, Yang X, Zhou L (2020) Radiomics based on multimodal MRI for the differential diagnosis of benign and malignant breast lesions. J Magn Reson Imaging 52:596–607. https://doi.org/10.1002/jmri.27098
Zhang X, Jia N, Wang Y (2023) Multi-input dense convolutional network for classification of hepatocellular carcinoma and intrahepatic cholangiocarcinoma. Biomed Signal Process Control. https://doi.org/10.1016/j.bspc.2022.104226
Zhao L, Lediju Bell MA (2022) A review of deep learning applications in lung ultrasound imaging of COVID-19 patients. BME Front. https://doi.org/10.34133/2022/9780173
Zhou X, Peng Y, Li Y, Zhang J, Liu T, Jiang H, Zheng J (2021) Radiomics methods to differentiate metastasis and primary lung cancer of breast cancer patients in PET/CT. Preprint (version 1) available at Research Square. https://doi.org/10.21203/rs.3.rs-502469/v1
Acknowledgements
We thank LetPub (www.letpub.com) for its linguistic assistance during the preparation of this manuscript.
Funding
This work was supported by the Suzhou science and technology plan project (no. SZS2022008); the Harbin Medical University Cancer Hospital Haiyan Fund Youth Funding Project (no. JJQN2020-13); the Scientific Research Project of Heilongjiang Health Commission (no. 2020-073) and the Guizhou Provincial People’s Hospital Talent Fund (Yunsong Peng) under Grant Hospital Talent Project (no. [2022]-5).
Author information
Authors and Affiliations
Contributions
Conception and design of the research were performed by LL and XZ. Material preparation and data collection were performed by XZ, YL and TL. Analysis of data and statistical analysis were performed by LL, JZ and WC. The manuscript was written by LL. The manuscript was reviewed by GY and YP. All authors read and approved the final manuscript.
Corresponding authors
Ethics declarations
Conflict of interest
The authors declare no conflict of interest.
Ethical approval
This study was performed in line with the principles of the Declaration of Helsinki. Approval was granted by the Ethics Committee of Harbin Medical University ethics. Informed consent was obtained from all individual participants included in the study.
Informed consent
Appropriate informed consent for the retrospective investigation was obtained from each patient. The authors affirm that human research participants provided informed consent for publication of the images in Fig. 1.
Additional information
Publisher's Note
Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Supplementary Information
Below is the link to the electronic supplementary material.
Rights and permissions
Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.
About this article
Cite this article
Li, L., Zhou, X., Cui, W. et al. Combining radiomics and deep learning features of intra-tumoral and peri-tumoral regions for the classification of breast cancer lung metastasis and primary lung cancer with low-dose CT. J Cancer Res Clin Oncol 149, 15469–15478 (2023). https://doi.org/10.1007/s00432-023-05329-2
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s00432-023-05329-2