Abstract
Nitrate assimilation in the model legume, Lotus japonicus, has been investigated using a variety of approaches. A gene encoding a nitrate-inducible nitrate reductase (NR) has been cloned and appears to be the only NR gene present in the genome. Most of the nitrate reductase activity (NRA) is found in the roots and the plant assimilates the bulk of its nitrogen in that tissue. We calculate that the observed rates of nitrate reduction are compatible with the growth requirement for reduced nitrogen. The NR mRNA, NRA and the nitrate content do not show a strong diurnal rhythm in the roots and assimilation continues during the dark period although export of assimilated N to the shoot is lower during this time. In shoots, the previous low NR activity may be further inactivated during the dark either by a phosphorylation mechanism or due to reduced nitrate flux coincident with a decreased delivery through the transpiration stream. From nitrate-sufficient conditions, the removal of nitrate from the external medium causes a rapid drop in hydraulic conductivity and a decline in nitrate and reduced-N export. Root nitrate content, NR and nitrate transporter (NRT2) mRNA decline over a period of 2 days to barely detectable levels. On resupply, a coordinated increase of NR and NRT2 mRNA, and NRA is seen within hours.
Similar content being viewed by others
Abbreviations
- NR:
-
Nitrate reductase
- NRA:
-
Nitrate reductase activity
References
Andrews M (1986) The partitioning of nitrate assimilation between root and shoot of higher plants. Plant Cell Environ 9:511–519
Bachmann M, Huber JL, Liao PC, Gage DA, Huber SC (1996a) The inhibitor protein of phosphorylated nitrate reductase from spinach (Spinacia oleracea) leaves is a 14–3-3 protein. FEBS Lett 387:127–131
Bachmann M, Shiraishi N, Campbell WH, Yoo BC, Harmon AC, Huber SC (1996b) Identification of ser-543 as the major regulatory phosphorylation site in spinach leaf nitrate reductase. Plant Cell 8:505–517
Botrel A, Kaiser WM (1997) Nitrate reductase activation state in barley roots in relation to the energy and carbohydrate status. Planta 201:496–501
Carvajal M, Cooke DT, Clarkson DT (1996) Responses of wheat plants to nutrient deprivation may involve the regulation of water-channel function. Planta 199:372–381
Choi HK, Kleinhofs A, An G (1989) Nucleotide sequence of rice nitrate reductase genes. Plant Mol Biol 13:731–733
Church GM, Gilbert W (1984) Genomic sequencing. Proc Natl Acad Sci USA 81:1991
Clarkson DT, Saker LR, Purves JV (1989) Depression of nitrate and ammonium transport in barley plants with diminished sulfate status—evidence of co-regulation of nitrogen and sulfate intake. J Exp Bot 40:953–963
Clarkson DT, Carvajal M, Henzler T, Waterhouse RN, Smyth AJ, Cooke DT, Steudle E (2000) Root hydraulic conductance: diurnal aquaporin expression and the effects of nutrient stress. J Exp Bot 51:61–70
Crawford NM, Smith M, Bellissimo D, Davis RW (1988) Sequence and nitrate regulation of the Arabidopsis thaliana mRNA encoding nitrate reductase, a metalloflavoprotein with three functional domains. Proc Natl Acad Sci USA 85:5006–5010
Daniel-Vedele F, Dorbe MF, Caboche M, Rouze P (1989) Cloning and analysis of the tomato nitrate reductase encoding gene–protein domain structure and amino acid homologies in higher-plants. Gene 85:371–380
Deane-Drummond CE, Clarkson DT, Johnson CB (1980) The effect of differential root and shoot temperature on the nitrate reductase activity, assayed in vivo and in vitro in roots of Hordeum vulgare (barley). Planta 148:455–461
Delhon P, Gojon A, Tillard P, Passama L (1995) Diurnal regulation of NO3− uptake in soybean plants. 1. Changes in NO3− influx, efflux, and n utilization in the plant during the day-night cycle. J Exp Bot 46:1585–1594
Deng MD, Moureaux T, Cherel I, Boutin JP, Caboche M (1991) Effects of nitrogen metabolites on the regulation and circadian expression of tobacco nitrate reductase. Plant Physiol Biochem 29:239–247
Douglas P, Morrice N, MacKintosh C (1995) Identification of a regulatory phosphorylation site in the hinge 1 region of nitrate reductase from spinach (Spinacea oleracea) leaves. FEBS Lett 377:113–117
Drew MC, Saker LR (1984) Uptake and long-distance transport of phosphate, potassium and chloride in relation to internal ion concentrations in barley. Evidence for non-allosteric regulation. Planta 160:500–507
Else MA, Davies WJ, Malone M, Jackson MB (1995) A negative hydraulic message from oxygen-deficient roots of tomato plants?: influence of soil flooding on leaf water potential, leaf expansion, and synchrony between stomatal conductance and root hydraulic conductivity. Plant Physiol 109:1017
Fido RJ (1987) Purification of nitrate reductase from spinach (Spinacea oleracea L.) by immunoaffinity chromatography using a monoclonal antibody. Plant Sci 50:111–115
Forde BG, Clarkson DT (1999) Nitrate and ammonium nutrition of plants: physiological and molecular perspectives. Adv Bot Res 30:1–90
Galangau F, Daniel-Vedele F, Moureaux T, Dorbe MF, Leydecker MT, Caboche M (1988) Expression of leaf nitrate reductase genes from tomato and tobacco in relation to light-dark regimes and nitrate supply. Plant Physiol 88:383–388
Glaab J, Kaiser WM (1993) Rapid modulation of nitrate reductase in pea roots. Planta 191:173–179
Grundemann D, Koepsell H (1994) Ethidium-bromide staining during denaturation with glyoxal for sensitive detection of RNA in agarose-gel electrophoresis. Anal Biochem 216:459–461
Handberg K, Stougaard J (1992) Lotus japonicus, an autogamous, diploid legume species for classical and molecular genetics. Plant J 2:487–496
Hoff T, Stummann BM, Henningsen KW (1991) Cloning and expression of a gene encoding a root specific nitrate reductase in bean (Phaseolus vulgaris). Physiol Plant 82:197–204
Huber JL, Huber SC, Campbell WH, Redinbaugh MG (1992) Reversible light/dark modulation of spinach leaf nitrate reductase activity involves protein phosphorylation. Arch Biochem Biophys 296:58–65
Kaiser WM, Huber SC (2001) Post-translational regulation of nitrate reductase: mechanism, physiological relevance and environmental triggers. J Exp Bot 52:1981–1990
Karmoker JL, Clarkson DT, Saker LR, Rooney JM, Purves JV (1991) Sulfate deprivation depresses the transport of nitrogen to the xylem and the hydraulic conductivity of barley (Hordeum vulgare L.) roots. Planta 185:269–278
Kawachi T, Shoji Y, Sugimoto T, Oji Y, Kleinhofs A, Warner RL, Ohtake N, Ohyama T, Sueyoshi K (2002) Role of xylem sap nitrate in the regulation of nitrate reductase gene expression in leaves of barley (Hordeum vulgare L.) seedlings. Soil Sci Plant Nutr 48:79–86
van der Leij M, Smith SJ, Miller AJ (1998) Remobilisation of vacuolar stored nitrate in barley root cells. Planta 205:64–72
Li XZ, Larson DE, Glibetic M, Oaks A (1995) Effect of glutamine on the induction of nitrate reductase. Physiol Plant 93:740
Mackintosh C, Douglas P, Lillo C (1995) Identification of a protein that inhibits the phosphorylated form of nitrate reductase from spinach (Spinacia oleracea) leaves. Plant Physiol 107:451–457
Man HM, Abd-El BGK, Stegmann P, Weiner H, Kaiser WM (1999) The activation state of nitrate reductase is not always correlated with total nitrate reductase activity in leaves. Planta 209:462–468
Matt P, Schurr U, Klein D, Krapp A, Stitt M (1998) Growth of tobacco in short-day conditions leads to high starch, low sugars, altered diurnal changes in the nia transcript and low nitrate reductase activity, and inhibition of amino acid synthesis. Planta 207:27–41
Mellor GE, Sheard RW (1971) Comparison of the nitrate metabolism in orchardgrass and birdsfoot trefoil. Can J Plant Sci 51:399–404
Moorhead G, Douglas P, Morrice N, Scarabel M, Aitken A, MacKintosh C (1996) Phosphorylated nitrate reductase from spinach leaves is inhibited by 14–3-3 proteins and activated by fusicoccin. Curr Biol 6:1104–1113
Murray MJ, Thompson WF (1980) Rapid isolation of high molecular weight DNA. Nucl Acid Res 8:4321–4325
Oaks A (1992) A re-evaluation of nitrogen assimilation in roots. BioScience 42:103–111
Palms B, Goupil P, Engler JD, VanDerStraeten D, VanMontagu M, Rambour S (1996) Evidence for the nitrate-dependent spatial regulation of the nitrate reductase gene in chicory roots. Planta 200:20–27
Prosser IM (1994) Cloning, sequence and expression of spinach nitrate reductase. PhD thesis, University of Bristol
Prosser IM, Lazarus CM (1990) Nucleotide sequence of a spinach nitrate reductase cDNA. Plant Mol Biol 15:187–190
Ruiz MT, Prosser IM, Hirel B, Clarkson DT (1999) A cDNA sequence (accession no. X94299) encoding a cytosolic subunit of glutamine synthetase in the model legume Lotus japonicus. (PGR99–031). Plant Physiol 119:1148–1148
Salsac L, Chaillou S, Morotgaudry JF, Lesaint C (1987) Nitrate and ammonium nutrition in plants. Plant Physiol Biochem 25:805–812
Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor
Smith D (1981) Birdsfoot trefoil. In: Forage management in the north. Kendall Hunt Publishing Co., pp 117–124
Stohr C, Mack G (2001) Diurnal changes in nitrogen assimilation of tobacco roots. J Exp Bot 52:1283–1289
Streit L, Martin B, Harper JE (1987) A method for the separation and partial purification of the three forms of nitrate reductase present in wild-type soybean leaves. Plant Physiol 84:654–657
Sueyoshi K, Kleinhofs A, Warner RL (1995) Expression of NADH-specific and NAD(P)H-bispecific nitrate reductase genes in response to nitrate in barley. Plant Physiol 107:1303–1311
Trueman LJ, Onyeocha I, Forde BG (1996) Recent advances in the molecular biology of a family of eukaryotic high affinity nitrate transporters. Plant Physiol Biochem 34:621–627
Vaucheret H, Kronenberger J, Rouze P, Caboche M (1989) Complete nucleotide sequence of the 2 homologous tobacco nitrate reductase genes. Plant Mol Biol 12:597–600
Verwoerd TC, Dekker BMM, Hoekema A (1989) A small-scale procedure for the rapid isolation of plant RNAs. Nucl Acids Res 17:2362
Waterhouse RN, Smyth AJ, Massonneau A, Prosser IM, Clarkson DT (1996) Molecular cloning and characterisation of asparagine synthetase from Lotus japonicus: dynamics of asparagine synthesis in N-sufficient conditions. Plant Mol Biol 30:883–897
Woodall J (1994) Studies of glutamine synthetase in Lotus species and the occurrence of root GS2 in other legumes. PhD thesis, University of London
Woodall J, Forde BG (1996) Glutamine synthetase polypeptides in the roots of 55 legume species in relation to their climatic origin and the partitioning of nitrate assimilation. Plant Cell Environ 19:848–858
Wray JL, Filner P (1970) Structural and functional relationships of enzyme activities induced by nitrate in barley. Biochem J 119:715–725
Wu S, Lu Q, Kriz AL, Harper JE (1995) Identification of cDNA clones corresponding to two inducible nitrate reductase genes in soybean: analysis in wild-type and nr∼1 mutant. Plant Mol Biol 29:491–506
Acknowledgements
We would like to thank Iggy Onyeocha for the NRT2 clone, Lez Saker and Judith Purves for assistance with 15N analysis. R.N.W. and A.M. gratefully acknowledge support by a BBSRC PMB II award and A.J.S. by funding from the E.U. Long Ashton Research Station received grant-aided support from the B.B.S.R.C.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Prosser, I.M., Massonneau, A., Smyth, A.J. et al. Nitrate assimilation in the forage legume Lotus japonicus L.. Planta 223, 821–834 (2006). https://doi.org/10.1007/s00425-005-0124-9
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s00425-005-0124-9