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Phylogeography of Batrachospermum arcuatum in North China based on ITS sequence data

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Abstract

Batrachospermum arcuatum Kylin is typically dioecious, although some monoecious specimens have been collected from four locations in North China. In this study, B. arcuatum populations, including monoecious and dioecious thalli, were collected from seven stream segments. The nuclear DNA internal transcribed spacer (ITS) region was sequenced for the seven populations, and a phylogenetic tree was constructed using Bayesian inference to assess intraspecific relationships. A haplotype network was also created. The ITS region in B. arcuatum from North China comprised 822–853 bp, with 10 haplotypes detected from the seven locations. The results of this study support the inclusion of monoecious individuals in the species B. arcuatum.

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References

  • Alvarez I, Wendel J F. 2003. Ribosomal ITS sequences and plant phylogenetic inference. Mol. Phylogenet. Evol., 29: 417–434.

    Article  Google Scholar 

  • Bakker F T, Olsen J L, Stam W T, van den Hoek C. 1992. Nuclear ribosomal DNA internal transcribed spacer regions (ITS1 and ITS2) define discrete biogeographic groups in Cladophora albida (Chlorophyta). J. Phycol., 28: 839–845.

    Article  Google Scholar 

  • Clement M, Posada D, Crandall K A. 2000. TCS: a computer program to estimate gene genealogies. Mol. Ecol., 9: 1 657–1 660.

    Article  Google Scholar 

  • Entwisle T J, Vis M L, Foard H J. 2000. Systematics and biogeography of Psilosiphon (Psilosiphonaceae, Rhodophyta) in Australia and New Zealand. Cryptogamie Algol., 21: 133–148.

    Article  Google Scholar 

  • Guindon S, Gascuel O. 2003. A simple, fast and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst. Biol., 52: 696–704.

    Article  Google Scholar 

  • Hu Z M, Guiry M D, Duan D L. 2009. Using the ribosomal internal transcribed spacer (ITS) as a complement marker for species identification of red macroalgae. Hydrobiologia, 635: 279–287.

    Article  Google Scholar 

  • Ji L, Feng J, Chen L, Xie S L. 2011. A molecular and morphological investigation of Batrachospermum arcuatum (Batrachospermales, Rhodophyta) in China. Aquat. Bot., 95(4): 254–257.

    Article  Google Scholar 

  • Kress W J, Wurdack K J, Zimmer E A, Weigt L A, Janzen D H. 2005. Use of DNA barcodes to identify flowering plants. Proceedings of the National Academy of Sciences USA, 102: 8 369–8 374.

    Article  Google Scholar 

  • Kumano S. 2002. Freshwater Red Algae of the World. Biopress Ltd. Bristol. p.375.

    Google Scholar 

  • Larkin M A, Blackshields G, Brown N P, Chenna R, McGettigan P A, McWilliam H, Valentin F, Wallace I M, Wilm A, Lopez R, Thompson J D, Gibson T J, Higgins D G. 2007. Clustal W and Clustal X version 2.0. Bioinformatics, 23: 2 947–2 948.

    Article  Google Scholar 

  • Müller K M, Vis M L, Chiasson W B, Whittick A, Sheath R G. 1997. Phenology of a Batrachospermum population in a boreal pond and its implications for the systematics of section Turfosa (Batrachospermales, Rhodophyta). Phycologia, 36: 68–75.

    Article  Google Scholar 

  • Posada D. 2008. jModelTest: phylogenetic model averaging. Mol. Biol. Evol., 25: 1 253–1 256.

    Article  Google Scholar 

  • Pueschel C M, Cole K M. 1982. Rhodophycean pit plugs: an ultra-structural survey with taxonomic implications. Amer. J. Bot., 16: 703–720.

    Article  Google Scholar 

  • Ronquist F, Huelsenbeck J P. 2003. MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics, 19: 1 572–1 574.

    Article  Google Scholar 

  • Sheath R G. 1984. The biology of freshwater red algae. In: Round F E, Chapman D J eds. Progress in Phycological Research, Vol. 3. Biopress, Bristol. p.89–158.

    Google Scholar 

  • Stewart S A, Vis M L. 2007. Investigation of two species complexes in Batrachospermum (Batrachospermales, Rhodophyta). Phycologia, 46(4): 380–385.

    Article  Google Scholar 

  • Templeton A R, Crandall K A, Sing C F. 1992. A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data. III. Cladogram estimation. Genetics, 132: 619–633.

    Google Scholar 

  • van Oppen M J H, Draisma S G A, Olsen J L, Stam W T. 1995. Multiple trans-Arctic passages in the red alga Phycodrys rubens: evidence from nuclear rDNA ITS sequences. Mar. Biol., 123: 179–188.

    Article  Google Scholar 

  • Vis M L, Feng J, Chiasson W B, Xie S L, Stancheva R, Entwisle T J, Chou J Y, Wang W L. 2010. Investigation of the molecular and morphological variability in Batrachospermum arcuatum (Batrachospermales, Rhodophyta) from geographically distant locations. Phycologia, 49: 545–553.

    Article  Google Scholar 

  • Vis M L, Sheath R G. 1997. Biogeography of Batrachospermum gelatinosum (Batrachospermales, Rhodophyta) in North America based on molecular and morphological data. J. Phycol., 33: 520–526.

    Article  Google Scholar 

  • Vis M L, Sheath R G. 1998. A molecular and morphological investigation of the relationship between Batrachospermum spermatoinvolucrum and B. gelatinosum (Batrachospermales, Rhodophyta). Eur. J. Phycol., 33: 235–243.

    Article  Google Scholar 

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Correspondence to Shulian Xie  (谢树莲).

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Supported by the National Natural Science Foundation of China (Nos. 30970187, 31200164)

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Ji, L., Xie, S., Chen, L. et al. Phylogeography of Batrachospermum arcuatum in North China based on ITS sequence data. Chin. J. Ocean. Limnol. 32, 372–376 (2014). https://doi.org/10.1007/s00343-014-3096-4

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