Skip to main content
Log in

Production, Partial Purification, and Characterization of Polygalacturonase from Aureobasidium pullulans P56 under Submerged Fermentation Using Agro-Industrial Wastes

  • Published:
Current Microbiology Aims and scope Submit manuscript

Abstract

Polygalacturonase (PGase) production by Aureobasidium pullulans P56 under submerged fermentation was investigated using agro-industrial wastes and commercial carbon and nitrogen sources. The maximum PGase concentration was equivalent to 8.6 U/mL that was obtained in presence of citrus pectin at 150 rpm, 30 °C, pH = 5.5, and 60 h of fermentation conditions. However, a significant amount of enzyme production was also recorded upon the utilization of corncob (5.3 U/mL) and wheat bran (4.4 U/mL) as carbon sources. Amongst the different nitrogen sources, the highest enzyme production (8.2 U/mL) was obtained in presence of ammonium sulphate and yeast extract simultaneously at a ratio of 1:1. The enzyme was partially purified by gel filtration using Sephadex G50 equilibrated and washed with 50 mM-sodium acetate buffer. The obtained yield and specific activity were determined equivalent to 17% and 9.53 U/mg, respectively. The molecular weight of the partially purified enzyme was estimated as 54 kDa on SDS-PAGE. The conditions affecting the enzyme activity were determined and the highest enzyme activity was recorded at 40 °C and 4.5 pH. Amongst the tested metal ions, 2 and 5 mM of CaCl2 concentrations increased the enzymatic activity by 30%. Overall, the use of corncob (2.5%) to produce PGase by A. pullulans represents an attractive agro-industrial substrate.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5

Similar content being viewed by others

Data Availability

The data used to support the findings of this study are available upon reasonable request. A. pullulans p56 has been deposited at the Culture Collection of the Biology Department of the Manisa Celal Bayar University, Turkey with an accession number CCB 012.

Code Availability

Not applicable.

References

  1. Kashyap DR, Vohra PK, Chopra S, Tewari R (2001) Applications of pectinases in the commercial sector: a review. Bioresour Technol 77:215–227. https://doi.org/10.1016/S0960-8524(00)00118-8

    Article  CAS  PubMed  Google Scholar 

  2. Pedrolli DB, Monteiro AC, Gomes E, Carmona EC (2009) Pectin and pectinases: production, characterization and industrial application of microbial pectinolytic enzymes. Open Biotechnol J 3:9–18. https://doi.org/10.2174/1874070700903010009

    Article  CAS  Google Scholar 

  3. de Souza TSP, Kawaguti HY (2021) Cellulases, hemicellulases, and pectinases: applications in the food and beverage industry. Food Bioprocess Technol 14:1446–1477. https://doi.org/10.1007/s11947-021-02678-z

    Article  CAS  Google Scholar 

  4. Amin F, Bhatti HN, Bilal M, Asgher M (2017) Improvement of activity, thermo-stability and fruit juice clarification characteristics of fungal exo-polygalacturonase. Int J Biol Macromol 95:974–984. https://doi.org/10.1016/j.ijbiomac.2016.10.086

    Article  CAS  PubMed  Google Scholar 

  5. Satapathy S, Rout JR, Kerry RG, Thatoi H, Sahoo SL (2020) Biochemical prospects of various microbial pectinase and pectin: an approachable concept in pharmaceutical bioprocessing. Front Nutr 7:117. https://doi.org/10.3389/fnut.2020.00117

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  6. Shrestha S, Rahman MS, Qin W (2021) New insights in pectinase production development and industrial applications. Appl Microbiol Biotechnol 105:9069–9087. https://doi.org/10.1007/s00253-021-11705-0

    Article  CAS  PubMed  Google Scholar 

  7. Sharma N, Rathore M, Sharma M (2013) Microbial pectinase: sources, characterization and applications. Rev Environ Sci Biotechnol 12:45–60. https://doi.org/10.1007/s11157-012-9276-9

    Article  CAS  Google Scholar 

  8. Garg G, Singh A, Kaur A, Singh R, Kaur J, Mahajan R (2016) Microbial pectinases: an ecofriendly tool of nature for industries. 3Biotech 6:1–13. https://doi.org/10.1007/s13205-016-0371-4

    Article  Google Scholar 

  9. Thakur A, Pahwa R, Singh S, Gupta R (2010) Production, purification, and characterization of polygalacturonase from Mucor circinelloides ITCC 6025. Enzyme Res. https://doi.org/10.4061/2010/170549

    Article  PubMed  PubMed Central  Google Scholar 

  10. Roosdiana A, Prasetyawan S, Mahdi C, Sutrisno S (2013) Production and characterization of Bacillus firmus pectinase. J Pure Appl Chem Res 2:35–41. https://doi.org/10.21776/ub.jpacr.2013.002.01.111

    Article  Google Scholar 

  11. Merín MG, Mendoza LM, Morata de Ambrosini VI (2014) Pectinolytic yeasts from viticultural and enological environments: Novel finding of Filobasidium capsuligenum producing pectinases. J Basic Microbiol 54:835–842. https://doi.org/10.1002/jobm.201200534

    Article  CAS  PubMed  Google Scholar 

  12. Cooke WB (1959) An ecological life history of Aureobasidium pullulans (de Bary) Arnaud. Mycopathol Mycol Appl 12:1–45. https://doi.org/10.1007/BF02118435

    Article  CAS  PubMed  Google Scholar 

  13. Chi Z, Wang F, Chi Z, Yue L, Liu G, Zhang T (2009) Bioproducts from Aureobasidium pullulans, a biotechnologically important yeast. Appl Microbiol Biotechnol 82:793–804. https://doi.org/10.1007/s00253-009-1882-2

    Article  CAS  PubMed  Google Scholar 

  14. Stratilová E, Dzúrová M, Breierová E, Malovíková A, Omelková J (2006) The life style of Aureobasidium pullulans and the multiple forms of its polygalacturonase. Biologia (Bratisl) 61:257–262. https://doi.org/10.2478/s11756-006-0047-3

    Article  Google Scholar 

  15. Cheng KC, Demirci A, Catchmark JM (2011) Pullulan: biosynthesis, production, and applications. Appl Microbiol Biotechnol 92:29–44. https://doi.org/10.1007/s00253-011-3477-y

    Article  CAS  PubMed  Google Scholar 

  16. Manitchotpisit P, Watanapoksin R, Price NPJ, Bischoff KM, Tayeh M, Teeraworawit S, Kriwong S, Leathers TD (2014) Aureobasidium pullulans as a source of liamocins (heavy oils) with anticancer activity. World J Microbiol Biotechnol 30:2199–2204. https://doi.org/10.1007/s11274-014-1639-7

    Article  CAS  PubMed  Google Scholar 

  17. Federici F (1982) Extracellular enzymatic activities in Aureobasidium pullulans. Mycologia 74:738. https://doi.org/10.2307/3792859

    Article  CAS  Google Scholar 

  18. Molnárová J, Vadkertiová R, Stratilová E (2014) Extracellular enzymatic activities and physiological profiles of yeasts colonizing fruit trees. J Basic Microbiol 54(Suppl 1):S74-84. https://doi.org/10.1002/jobm.201300072

    Article  CAS  PubMed  Google Scholar 

  19. Leathers TD, Rich JO, Anderson AM, Manitchotpisit P (2013) Lipase production by diverse phylogenetic clades of Aureobasidium pullulans. Biotechnol Lett 35:1701–1706. https://doi.org/10.1007/s10529-013-1268-5

    Article  CAS  PubMed  Google Scholar 

  20. Bankeeree W, Lotrakul P, Prasongsuk S, Chaiareekij S, Eveleigh DE, Kim SW, Punnapayak H (2014) Effect of polyols on thermostability of xylanase from a tropical isolate of Aureobasidium pullulans and its application in prebleaching of rice straw pulp. Springerplus 3:1–11. https://doi.org/10.1186/2193-1801-3-37

    Article  CAS  Google Scholar 

  21. Rich JO, Leathers TD, Anderson AM, Bischoff KM, Manitchotpisit P (2013) Laccases from Aureobasidium pullulans. Enzyme Microb Technol 53:33–37. https://doi.org/10.1016/j.enzmictec.2013.03.015

    Article  CAS  PubMed  Google Scholar 

  22. Manitchotpisit P, Skory CD, Leathers TD, Lotrakul P, Eveleigh DE, Prasongsuk S, Punnapayak H (2011) α-Amylase activity during pullulan production and α-amylase gene analyses of Aureobasidium pullulans. J Ind Microbiol Biotechnol 38:1211–1218. https://doi.org/10.1007/s10295-010-0899-y

    Article  CAS  PubMed  Google Scholar 

  23. Mari M, Martini C, Spadoni A, Rouissi W, Bertolini P (2012) Biocontrol of apple postharvest decay by Aureobasidium pullulans. Postharvest Biol Technol 73:56–62. https://doi.org/10.1016/j.postharvbio.2012.05.014

    Article  Google Scholar 

  24. Roukas T (1999) Pullulan production from brewery wastes by Aureobasidium pullulans. World J Microbiol Biotechnol 15:447–450. https://doi.org/10.1023/A:1008996522115

    Article  CAS  Google Scholar 

  25. Göksungur Y, Uçan A, Güvenç U (2004) Production of pullulan from beet molasses and synthetic medium by Aureobasidium pullulans. Turkish J Biol 28:23–30

    Google Scholar 

  26. Göksungur Y, Dǎgbaǧli S, Uçan A, Güvenç U (2005) Optimization of pullulan production from synthetic medium by Aureobasidium pullulans in a stirred tank reactor by response surface methodology. J Chem Technol Biotechnol 80:819–827. https://doi.org/10.1002/jctb.1254

    Article  CAS  Google Scholar 

  27. Göksungur Y, Uzunogullari P, Daǧbaǧli S (2011) Optimization of pullulan production from hydrolysed potato starch waste by response surface methodology. Carbohydr Polym 83:1330–1337. https://doi.org/10.1016/j.carbpol.2010.09.047

    Article  CAS  Google Scholar 

  28. Oskay M, Yalçin HT (2015) Screening of yeast strains for pectinolytic activity: effects of different carbon and nitrogen sources in submerged fermentations. Online J Biol Sci 15:89–96. https://doi.org/10.3844/ojbsci.2015.89.96

    Article  CAS  Google Scholar 

  29. Lan Pham P, Taillandier P, Delmas M, Strehaiano P (1998) Production of xylanases by Bacillus polymyxa using lignocellulosic wastes. Ind Crops Prod 2–3:195–203. https://doi.org/10.1016/S0926-6690(97)00048-4

    Article  Google Scholar 

  30. Miller GL (1959) Use of dinitrosalicylic acid reagent for determination of reducing sugar. Anal Chem 31:426–428. https://doi.org/10.1021/ac60147a030

    Article  CAS  Google Scholar 

  31. Bennett G (1992) Lowry’s handbook of right-to-know emergency planning. J Hazard Mater 30:361–362. https://doi.org/10.1016/0304-3894(92)87011-4

    Article  Google Scholar 

  32. Manachini PL, Parini C, Fortina MG (1988) Pectic enzymes from Aureobasidium pullulans LV 10. Enzyme Microb Technol 10:682–685. https://doi.org/10.1016/0141-0229(88)90060-9

    Article  CAS  Google Scholar 

  33. Merín MG, Martín MC, Rantsiou K, Cocolin L, de Ambrosini VIM (2015) Characterization of pectinase activity for enology from yeasts occurring in Argentine bonarda grape. Brazilian J Microbiol 46:815–823. https://doi.org/10.1590/S1517-838246320140160

    Article  CAS  Google Scholar 

  34. Sudeep KC, Upadhyaya J, Joshi DR, Lekhak B, Chaudhary DK, Pant BR, Bajgai TR, Dhital R, Khanal S, Koirala N, Raghavan V (2020) Production, characterization, and industrial application of pectinase enzyme isolated from fungal strains. Fermentation 6:59. https://doi.org/10.3390/fermentation6020059

    Article  CAS  Google Scholar 

  35. Munir M, Abdullah R, Ul Haq I, Afshan Kaleem A, Iqtedar M, Naz S (2020) Strain improvement by random mutagenesis of Aspergillus tamarii RMLC-10 for improved biosynthesis of polygalacturonase. Pakistan J Bot 52:1809–1813. https://doi.org/10.30848/PJB2020-5(29)

    Article  CAS  Google Scholar 

  36. Onetto CA, Borneman AR, Schmidt SA (2020) Investigating the effects of Aureobasidium pullulans on grape juice composition and fermentation. Food Microbiol. https://doi.org/10.1016/j.fm.2020.103451

    Article  PubMed  Google Scholar 

  37. Šelo G, Planinić M, Tišma M, Tomas S, Komlenić DK, Bucić-Kojić A (2021) A comprehensive review on valorization of agro-food industrial residues by solid-state fermentation. Foods 10:103451. https://doi.org/10.3390/foods10050927

    Article  CAS  Google Scholar 

  38. El Gamal NG, Atalla SMM, El-mougy NS, Abdel-Kader MM (2018) Production of pectinase by Saccharomyces cerevisiae and its application as biocontrol agent against navel orange and apple fruits decay. Biosci Res 15:4136–4147

    Google Scholar 

  39. Moresi M, Petruccioli M, Federici F (1991) Modelling of cyclic fed-batch plus batch polygalacturonase production by Aureobasidium pullulans on raw orange peel. Appl Microbiol Biotechnol 34:742–748. https://doi.org/10.1007/BF00169344

    Article  CAS  Google Scholar 

  40. Bennamoun L, Hiligsmann S, Dakhmouche S, Ait-Kaki A, Labbani FZK, Nouadri T, Meraihi Z, Turchetti B, Buzzini P, Thonart P (2016) Production and properties of a thermostable, pH-stable exo-polygalacturonase using Aureobasidium pullulans isolated from saharan soil of algeria grown on tomato pomace. Foods 5:1–20. https://doi.org/10.3390/foods5040072

    Article  CAS  Google Scholar 

  41. Galiotou-Panayotou M, Kalantzi O, Aggelis G (1998) Modelling of simultaneous production of polygalacturonase and exopolysaccharide by Aureobasidium pullulans ATHUM 2915. Antonie Van Leeuwenhoek 73:155–162. https://doi.org/10.1023/A:1000657403593

    Article  CAS  PubMed  Google Scholar 

  42. Yegin S, Altinel B, Tuluk K (2018) A novel extremophilic xylanase produced on wheat bran from Aureobasidium pullulans NRRL Y-2311-1: effects on dough rheology and bread quality. Food Hydrocoll 81:389–397. https://doi.org/10.1016/j.foodhyd.2018.03.012

    Article  CAS  Google Scholar 

  43. Sakai T, Takaoka A (1985) Purification, crystallization, and some properties of endo-polygalacturonase from Aureobasidium pullulans. Agric Biol Chem 49:449–458. https://doi.org/10.1271/bbb1961.49.449

    Article  CAS  Google Scholar 

  44. Pagnonceli J, Rasbold LM, Rocha GB, Silva JLC, Kadowaki MK, Simão RCG, Maller A (2019) Biotechnological potential of an exo-polygalacturonase of the new strain Penicillium janthinellum VI2R3M: biochemical characterization and clarification of fruit juices. J Appl Microbiol 127:1706–1715. https://doi.org/10.1111/jam.14426

    Article  CAS  PubMed  Google Scholar 

  45. Biely P, Heinrichová K, Kruz̃iková M, (1996) Induction and inducers of the pectolytic system in Aureobasidium pullulans. Curr Microbiol 33:6–10. https://doi.org/10.1007/s002849900065

    Article  CAS  Google Scholar 

  46. Buzzini P, Martini A (2002) Extracellular enzymatic activity profiles in yeast and yeast-like strains isolated from tropical environments. J Appl Microbiol 93:1020–1025. https://doi.org/10.1046/j.1365-2672.2002.01783.x

    Article  CAS  PubMed  Google Scholar 

  47. Li H, Chi Z, Wang X, Duan X, Ma L, Gao L (2007) Purification and characterization of extracellular amylase from the marine yeast Aureobasidium pullulans N13d and its raw potato starch digestion. Enzyme Microb Technol 40:1006–1012. https://doi.org/10.1016/j.enzmictec.2006.07.036

    Article  CAS  Google Scholar 

  48. Kudanga T, Mwenje E (2005) Extracellular cellulase production by tropical isolates of Aureobasidium pullulans. Can J Microbiol 51:773–776. https://doi.org/10.1139/W05-053

    Article  CAS  PubMed  Google Scholar 

  49. Leite RSR, Bocchini DA, Martins EDS, Silva D, Gomes E, Da Silva R (2007) Production of cellulolytic and hemicellulolytic enzymes from Aureobasidium pullulans on solid-state fermentation. Appl Biochem Biotechnol 137:281–288. https://doi.org/10.1007/s12010-007-9058-y

    Article  PubMed  Google Scholar 

  50. Leite RSR, Alves-Prado HF, Cabral H, Pagnocca FC, Gomes E, Da-Silva R (2008) Production and characteristics comparison of crude β-glucosidases produced by microorganisms Thermoascus aurantiacus e Aureobasidium pullulans in agricultural wastes. Enzyme Microb Technol 43:391–395. https://doi.org/10.1016/j.enzmictec.2008.07.006

    Article  CAS  Google Scholar 

Download references

Acknowledgements

I would like to thank the Manisa Celal Bayar University for Partial financial support.

Funding

Partial financial support was received from Manisa Celal Bayar University under project number 2015–093.

Author information

Authors and Affiliations

Authors

Contributions

The author, MO: Contributed to all processes of the study such as the design of the research, conducting laboratory experiments, interpreting the data, and writing and finalizing the article.

Corresponding author

Correspondence to Mustafa Oskay.

Ethics declarations

Conflict of interest

The author has no conflict of interest to declare that are relevant to the content of this article.

Ethical Approval

There are no ethical issues related to the research. The author also confirmed that the study did not involve any endangered or protected species, any human subjects or animal handling procedures.

Consent to Participate

Not applicable.

Consent for Publication

Not applicable.

Additional information

Publisher's Note

Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Rights and permissions

Springer Nature or its licensor holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Oskay, M. Production, Partial Purification, and Characterization of Polygalacturonase from Aureobasidium pullulans P56 under Submerged Fermentation Using Agro-Industrial Wastes. Curr Microbiol 79, 296 (2022). https://doi.org/10.1007/s00284-022-02991-6

Download citation

  • Received:

  • Accepted:

  • Published:

  • DOI: https://doi.org/10.1007/s00284-022-02991-6

Navigation