Abstract
Purpose
To develop and validate the predictive value of an 18F-fluorodeoxyglucose positron emission tomography/computed tomography (18F-FDG PET/CT) model for breast cancer neoadjuvant chemotherapy (NAC) efficacy based on the tumor-to-liver ratio (TLR) radiomic features and multiple data pre-processing methods.
Methods
One hundred and ninety-three breast cancer patients from multiple centers were retrospectively included in this study. According to the endpoint of NAC, we divided the patients into pathological complete remission (pCR) and non-pCR groups. All patients underwent 18F-FDG PET/CT imaging before NAC treatment, and CT and PET images volume of interest (VOI) segmentation by manual segmentation and semi-automated absolute threshold segmentation, respectively. Then, feature extraction of VOI was performed with the pyradiomics package. A total of 630 models were created based on the source of radiomic features, the elimination of the batch effect approach, and the discretization method. The differences in data pre-processing approaches were compared and analyzed to identify the best-performing model, which was further tested by the permutation test.
Results
A variety of data pre-processing methods contributed in varying degrees to the improvement of model effects. Among them, TLR radiomic features and Combat and Limma methods that eliminate batch effects could enhance the model prediction overall, and data discretization could be used as a potential method that can further optimize the model. A total of seven excellent models were selected and then based on the AUC of each model in the four test sets and their standard deviations, we selected the optimal model. The optimal model predicted AUC between 0.7 and 0.77 for the four test groups, with p-values less than 0.05 for the permutation test.
Conclusion
It is necessary to enhance the predictive effect of the model by eliminating confounding factors through data pre-processing. The model developed in this way is effective in predicting the efficacy of NAC for breast cancer.
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Data availability
The data used and/or analyzed during the current study are available from the corresponding author on reasonable request.
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Acknowledgements
We gratefully appreciate the award that supported collection and sharing of TCIA dataset (U01 CA142565, PI Thomas E. Yankeelov).
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All authors contributed to the study conception and design. Material preparation were performed by Kun Chen, Jian Wang, and Shuai Li; data collection and analysis were performed by Kun Chen and Jian Wang. The first draft of the manuscript was written by Kun Chen, and the manuscript was reviewed and edited by Jian Wang, Wengui Xu, and Wen Zhou. All authors read and approved the final manuscript.
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All procedures in studies involving human participants were conducted by the 1964 Helsinki Declaration and its later amendments or comparable ethical standards. The Ethics Committee of the Tianjin Medical University Cancer Institute and Hospital approved this study (registration number bc2022176; 12 July 2022).
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Kun Chen and Jian Wang contributed equally to this work.
This article is part of the Topical Collection on Advanced Image Analyses (Radiomics and Artificial Intelligence).
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Chen, K., Wang, J., Li, S. et al. Predictive value of 18F-FDG PET/CT-based radiomics model for neoadjuvant chemotherapy efficacy in breast cancer: a multi-scanner/center study with external validation. Eur J Nucl Med Mol Imaging 50, 1869–1880 (2023). https://doi.org/10.1007/s00259-023-06150-2
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DOI: https://doi.org/10.1007/s00259-023-06150-2